BAC Information

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BAC

Clone NameB6Ng01-179L18
Chromosome2 (Build37)
Map Location 76,229,416 - 76,390,131
singlet/doubletdoublet
Overlap geneOsbpl6
Upstream geneLOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1
Downstream genePrkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179L18.bB6Ng01-179L18.g
ACCGA006373GA006374
length1,199869
definitionB6Ng01-179L18.b B6Ng01-179L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,388,973 - 76,390,131)(76,229,416 - 76,230,270)
sequence
gaattcatgttcagtcaccacactccattaatgctacctccttcatccaa
tgaagaagtgttgttaacaacaagagcagcccagactcacgagtacccag
gagcccaggaacccagtcctgaaattactcctaaattgttcttgatccac
tatcctcactaaggtctcctcagctcatggctaaggacctctcctctgca
ggagctctctgtaccccaatgatcagctcaaaatcgtgttaccctcgtgt
gattccaaagttcattacccaccccaaacagccttacaatgcttcagaaa
actctaaagtctataaaaggccttcttgtcaacttagctacatctgacag
attatcctatgaagaggatttttatgtgaaataaagtagagcaaaatatg
cagatgctgatgtgtacagtaaacagcaaaataaacagaaacgtccttcc
ccaggggcccaagatggctttaaagcttcacatttgactctaatactcaa
ttacaactgatgatgtctcttctaaattattaggaaataaataatgcaca
gttagcaaacccagtcttatttattacccacataggaccacaaaccaatt
aacattcaggagtctcataatctgatacgtgggaggtaaggagaaggaca
aaaggctctctcctgtattttgataaatgtaatggaaattacccagcaag
tctgagctcttagctatgccacttgcaactggagaaatggacctttggtt
ggaaactagagctggagagtttttcttattccagagaaaacagttgggaa
ggatttttggtttcagtccaccaatcttcagatatcacccaagtttattt
taattaagtcaaggcgagggacagaaacaatgcatcttttatcaatgctt
ttgtgccaaagatacaggcagaaagctgggaaaaactaaagaaattaaaa
attttatgattttctttttcaaagatctatttggaaagacggtctcattt
aattttggaacttaccactgggaattcatttccggcctcttgaacaaaaa
ctccaaggaagcccagagaaaataatggcgacttaccttggggtaccctc
taagtttctctaaaattcccatctctctctggcctccctggcttcattct
ctttcatctcagaaactgggttgcaatttagggccaacccaactcctgg
gaattccacagttccattgctcactatatatccagtgtgtgtgtgtgtgt
gtgtatgtgtgtgtgttaccaacacatgcaaaaatgcccttagcattaat
tacactagtttcaaattggaaatgactgcagggtctgtcaatagaaggca
tagagtgaatagggtgtgctaataggattagcaaggaatgaagctggctt
acactctgtgtgacaactttagtgaatctcacagacaccatgagcaaaag
aaaccaaccaaccatccaacaaatgaaaatgtgctcactaattcccactg
gaagagttcgaagactagccaaatggaatgggaatggttacaaaggaagc
ctaggatgtgctagcattcttgtcttttggaccacaatggtgatggcttc
tgttcatagtttatgcgtgttcatagtacttgtatacttcaattgaagtt
tcttgtttgttttgaggcagagtctcactgtgaatccctggctgacctgg
aacacacagtgtaaaccagggcctcgcctccaactcacagagatctccct
gcctctaactcccaagtactgggctaaaaggttttcaccacctagcctgg
ctgaagtttctgttttcttaatgagtaaagtcaaattagcacagtactaa
aggaatcacacagctctgtgatctgagaacagtgcccccgaaagcttttg
gaagaccaggctttcttcatgtggaaatgtgtgcacatgggaccactttg
tttattcccatggttgttgcaggtgcccttctgaggcctgcaaagggaca
tcagattaccatagcttggtggttgaaggcagttgttaattttctgttag
acagtgctggtgaactgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76388973_76390131
seq2: B6Ng01-179L18.b_44_1242 (reverse)

seq1  CCAGGAATTGGGTT-GCCCTAAATACCAA-CCAG-TTCTGAGATGAAAGA  47
      |||||| ||||||| |||||||||  ||| |||| |||||||||||||||
seq2  CCAGGAGTTGGGTTGGCCCTAAATTGCAACCCAGTTTCTGAGATGAAAGA  50

seq1  GAATG-AGCCA-GGAGGCCAGAGAGA-TTGGGGATTTGAG---AACTTAG  91
      ||||| ||||| ||||||||||||||  |||| |||| ||   |||||||
seq2  GAATGAAGCCAGGGAGGCCAGAGAGAGATGGGAATTTTAGAGAAACTTAG  100

seq1  AGG--TCCCCAAGGT-AGTCGCCAT--ATTTCTCTGGGCCTCCT--GAGT  134
      |||   ||||||||| |||||||||   ||||||||||| ||||  ||||
seq2  AGGGTACCCCAAGGTAAGTCGCCATTATTTTCTCTGGGCTTCCTTGGAGT  150

seq1  TTTTGT--CAGAGGCCGG-AATGAA-TCCCAGT-GTTAGT--CCAAATTA  177
      ||||||   ||||||||| |||||| ||||||| || |||  | ||||||
seq2  TTTTGTTCAAGAGGCCGGAAATGAATTCCCAGTGGTAAGTTCCAAAATTA  200

seq1  AATGAGACCGTCTTT-CAAATAGATCTTTGAAAA--GAAATCAT-AAATT  223
      ||||||||||||||| ||||||||||||||||||   ||||||| |||||
seq2  AATGAGACCGTCTTTCCAAATAGATCTTTGAAAAAGAAAATCATAAAATT  250

seq1  TTTAA-TTCTTTAGTTTTT-CCAGC-TTCTGCCTGTATCTTTGGCAC-AA  269
      ||||| ||||||||||||| ||||| ||||||||||||||||||||| ||
seq2  TTTAATTTCTTTAGTTTTTCCCAGCTTTCTGCCTGTATCTTTGGCACAAA  300

seq1  AGCATTGATAAAAGATGCATTGTTTCTGTCCCTCGCC-TGACTT-ATTAA  317
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  AGCATTGATAAAAGATGCATTGTTTCTGTCCCTCGCCTTGACTTAATTAA  350

seq1  A--TAACTTGGGTGATATCTG-AGATTGGTGGACTGAAACC--AAATCCT  362
      |   ||||||||||||||||| |||||||||||||||||||  |||||||
seq2  AATAAACTTGGGTGATATCTGAAGATTGGTGGACTGAAACCAAAAATCCT  400

seq1  TCCCAACTGTTTTCTCTGGAATAAG-AAAACTCTCCAGCTCTAGTTTCC-  410
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  TCCCAACTGTTTTCTCTGGAATAAGAAAAACTCTCCAGCTCTAGTTTCCA  450

seq1  ACCAAAGGTCCATTTCTCCAGTTGCAAGTGGCATAGCTAAGAGCTCAGAC  460
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGTCCATTTCTCCAGTTGCAAGTGGCATAGCTAAGAGCTCAGAC  500

seq1  TTGCTGGGTAATTTCCATTACATTTATCAAAATACAGGAGAGAGCCTTTT  510
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGTAATTTCCATTACATTTATCAAAATACAGGAGAGAGCCTTTT  550

seq1  GTCCTTCTCCTTACCTCCCACGTATCAGATTATGAGACTCCTGAATGTTA  560
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTCCTTACCTCCCACGTATCAGATTATGAGACTCCTGAATGTTA  600

seq1  ATTGGTTTGTGGTCCTATGTGGGTAATAAATAAGACTGGGTTTGCTAACT  610
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTTGTGGTCCTATGTGGGTAATAAATAAGACTGGGTTTGCTAACT  650

seq1  GTGCATTATTTATTTCCTAATAATTTAGAAGAGACATCATCAGTTGTAAT  660
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTATTTATTTCCTAATAATTTAGAAGAGACATCATCAGTTGTAAT  700

seq1  TGAGTATTAGAGTCAAATGTGAAGCTTTAAAGCCATCTTGGGCCCCTGGG  710
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTAGAGTCAAATGTGAAGCTTTAAAGCCATCTTGGGCCCCTGGG  750

seq1  GAAGGACGTTTCTGTTTATTTTGCTGTTTACTGTACACATCAGCATCTGC  760
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACGTTTCTGTTTATTTTGCTGTTTACTGTACACATCAGCATCTGC  800

seq1  ATATTTTGCTCTACTTTATTTCACATAAAAATCCTCTTCATAGGATAATC  810
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGCTCTACTTTATTTCACATAAAAATCCTCTTCATAGGATAATC  850

seq1  TGTCAGATGTAGCTAAGTTGACAAGAAGGCCTTTTATAGACTTTAGAGTT  860
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATGTAGCTAAGTTGACAAGAAGGCCTTTTATAGACTTTAGAGTT  900

seq1  TTCTGAAGCATTGTAAGGCTGTTTGGGGTGGGTAATGAACTTTGGAATCA  910
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGCATTGTAAGGCTGTTTGGGGTGGGTAATGAACTTTGGAATCA  950

seq1  CACGAGGGTAACACGATTTTGAGCTGATCATTGGGGTACAGAGAGCTCCT  960
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGGGTAACACGATTTTGAGCTGATCATTGGGGTACAGAGAGCTCCT  1000

seq1  GCAGAGGAGAGGTCCTTAGCCATGAGCTGAGGAGACCTTAGTGAGGATAG  1010
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGAGAGGTCCTTAGCCATGAGCTGAGGAGACCTTAGTGAGGATAG  1050

seq1  TGGATCAAGAACAATTTAGGAGTAATTTCAGGACTGGGTTCCTGGGCTCC  1060
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAAGAACAATTTAGGAGTAATTTCAGGACTGGGTTCCTGGGCTCC  1100

seq1  TGGGTACTCGTGAGTCTGGGCTGCTCTTGTTGTTAACAACACTTCTTCAT  1110
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACTCGTGAGTCTGGGCTGCTCTTGTTGTTAACAACACTTCTTCAT  1150

seq1  TGGATGAAGGAGGTAGCATTAATGGAGTGTGGTGACTGAACATGAATTC  1159
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAAGGAGGTAGCATTAATGGAGTGTGGTGACTGAACATGAATTC  1199

seq1: chr2_76229416_76230270
seq2: B6Ng01-179L18.g_69_937

seq1  GAATTCCACAGTTCCATTGCTCACTATATATCCAGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGTTCCATTGCTCACTATATATCCAGTGTGTGTGTGTGTGT  50

seq1  GTGTATGTGTGTGTGTTACCAACACATGCAAAAATGCCCTTAGCATTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGTGTGTGTGTTACCAACACATGCAAAAATGCCCTTAGCATTAAT  100

seq1  TACACTAGTTTCAAATTGGAAATGACTGCAGGGTCTGTCAATAGAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTAGTTTCAAATTGGAAATGACTGCAGGGTCTGTCAATAGAAGGCA  150

seq1  TAGAGTGAATAGGGTGTGCTAATAGGATTAGCAAGGAATGAAGCTGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGAATAGGGTGTGCTAATAGGATTAGCAAGGAATGAAGCTGGCTT  200

seq1  ACACTCTGTGTGACAACTTTAGTGAATCTCACAGACACCATGAGCAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGTGTGACAACTTTAGTGAATCTCACAGACACCATGAGCAAAAG  250

seq1  AAACCAACCAACCATCCAACAAATGAAAATGTGCTCACTAATTCCCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACCAACCATCCAACAAATGAAAATGTGCTCACTAATTCCCACTG  300

seq1  GAAGAGTTCGAAGACTAGCCAAATGGAATGGGAATGGTTACAAAGGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTTCGAAGACTAGCCAAATGGAATGGGAATGGTTACAAAGGAAGC  350

seq1  CTAGGATGTGCTAGCATTCTTGTCTTTTGGACCACAATGGTGATGGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATGTGCTAGCATTCTTGTCTTTTGGACCACAATGGTGATGGCTTC  400

seq1  TGTTCATAGTTTATGCGTGTTCATAGTACTTGTATACTTCAATTGAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATAGTTTATGCGTGTTCATAGTACTTGTATACTTCAATTGAAGTT  450

seq1  TCTTGTTTGTTTTGAGGCAGAGTCTCACTGTGAATCCCTGGCTGACCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTGTTTTGAGGCAGAGTCTCACTGTGAATCCCTGGCTGACCTGG  500

seq1  AACACACAGTGTAAACCAGGGCCTCGCCTCCAACTCACAGAGATCTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAGTGTAAACCAGGGCCTCGCCTCCAACTCACAGAGATCTCCCT  550

seq1  GCCTCTAACTCCCAAGTACTGGGCTAAAAGGTTTTCACCACCTAGCCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTAACTCCCAAGTACTGGGCTAAAAGGTTTTCACCACCTAGCCTGG  600

seq1  CTGAAGTTTCTG-TTTCTTAATGAGTAAAGTCAAATTAGCACAGTACT-A  648
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  CTGAAGTTTCTGTTTTCTTAATGAGTAAAGTCAAATTAGCACAGTACTAA  650

seq1  AGGAAGCACACAGCTCTGTGATCTGAGAACAGTGCCCC--GAAGCTTTTG  696
      ||||| ||||||||||||||||||||||||||||||||   |||||||||
seq2  AGGAATCACACAGCTCTGTGATCTGAGAACAGTGCCCCCGAAAGCTTTTG  700

seq1  GAAGACCAGGCTTTCTTCATGTGG-AATGTGTGCACAT-GGACCAC-TTG  743
      |||||||||||||||||||||||| ||||||||||||| ||||||| |||
seq2  GAAGACCAGGCTTTCTTCATGTGGAAATGTGTGCACATGGGACCACTTTG  750

seq1  TATA-TGCCATGGTTG-TGCAGGTG-CCTTCTGAGGCCTGCAAA-GGACA  789
      | || | ||||||||| |||||||| |||||||||||||||||| |||||
seq2  TTTATTCCCATGGTTGTTGCAGGTGCCCTTCTGAGGCCTGCAAAGGGACA  800

seq1  TCAGAGTCACCAGAGCT--GGGGTTGAAGGCAGTTG-TAAGCTTCTGTTA  836
      ||||| | |||| ||||  | ||||||||||||||| |||  ||||||||
seq2  TCAGA-TTACCATAGCTTGGTGGTTGAAGGCAGTTGTTAATTTTCTGTTA  849

seq1  GACAGTGCTGG-GAACTGAA  855
      ||||||||||| ||||||||
seq2  GACAGTGCTGGTGAACTGAA  869