BAC Information

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BAC

Clone NameB6Ng01-180D08
Chromosome2 (Build37)
Map Location 43,707,400 - 43,708,062
singlet/doubletsinglet
Overlap geneArhgap15
Upstream geneLOC100041228, LOC100041245, Kynu
Downstream geneGtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180D08.bB6Ng01-180D08.g
ACCGA006709GA006710
length1,229665
definitionB6Ng01-180D08.b B6Ng01-180D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcatagttccatagaagaacaaatactaatgctcttgaaaat
attatacataataaaaaggggagcaagattttcaatttttatgaagccaa
tattaccctgataccaaaaaccaaacaaagacattgcctccccccaaaat
ataggaaaatatctttctgaacatagaagcaaaacttgtcagtgtaatac
gtgaaaactacttaaagactacctcaaagaattatactgtatgataaaat
tagcttcacctcagagatgtaggaagggctcagcataagtacattaataa
acacagtgtacctgaaaaaacacattccagggtaggaaccacgtgattat
ccaattatctgcagaaaaggactctgataaactccaaaacctctttatga
taaaaagtcctagagagaataggaatataaggatcatatctcaacataac
aaaagtaatatacagcaagcccacatcagacatcaccccaagtgtagtaa
gactcacagcatttgcactaaaatcaggaggaagacaaggatgtccactc
tctctcttccaacatgttcaatacagctcttgaagtcttagcctgagcaa
tgagacatgtgatggagaaaaaggaataaaatcagaaatgcaaggaggca
aaagatctctttttgcagacgacacaactctttacaccaaatgtcgcgtc
tgctctcgaccagcaagaacgacacgaccaccagtccttccaacagcagt
ttattcagcaaacttccgtcttcatctctctcgcttcaactttttctctc
tcaactttatctctctctctctctaaccccggccctctcactcttatata
cttatcagtcctcatccactcacggcaggccacgtcaactcaccaggcac
gcagctttcagctaatcagggcagcagggggcatgtctccaccaaaatgg
atttcgccagtatcctggtgcacctgcgcagctctcaggatggttgtggc
ttattttcagtgtatgaaggaaggtcaggtgcaagtcataagaacttagt
tgcagtcctggggcgccttctggggactgctgccaacaccccgctccctt
cacatcaaagactgtaaggaattgccaagcagaaaatcccatcagttcaa
taatatacattccgaagtagccaggaatacaagtaaccggaataaaacgg
tactcttccatttgacccaatgtgcggca
gaattcattcctcttagtagctcttcaaggtgaatgaggtgtcagtataa
ctgaggagaaaaatgaagcttactgagactgtgtcctacctaataagggc
acacagtcatgtgggagagatttaggggtttacctctgaagcccacctcc
ggtctgaaggatcagctgttctggagcaggaccatgcacctttctcttat
gcatgctctctgctgagcttcatggcaggagttagaaggagagaacacag
tcttggaaaagcattagacctctttctcctagaagcagagctgccttttt
tggtgagtccagccttctgtaccactttctgcagtctctgtgtgttccta
caccagtggggaacagctaaagcttctgtcttcataataacattgggcac
atagaacaatgttaaccctcccatgaaggagggttctttcttgaacttcc
taccattcttccttccttccttcttccattcttcccttccttccttcttc
cattcttcccttccttccttctttccttccttccttccttccttccttcc
ttccttcccttcttccttccttccttcttcccttcttcccttcttccctt
cttcccttccttccttctttccttccttcctttcttccttccttcctttc
cttcctttccttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43707400_43708062
seq2: B6Ng01-180D08.g_69_733 (reverse)

seq1  AGGAAGG-AAGGAAGG-AAGGAAGGAAGGAAGAAAGGAAGGAAGGAAAGA  48
      || |||| |||||||| |||||||||||||||||||||||||||||||||
seq2  AGTAAGGAAAGGAAGGAAAGGAAGGAAGGAAGAAAGGAAGGAAGGAAAGA  50

seq1  AGGAAGGAAGGGAAGAAGGGAAGAAGGGAAGAAGGGAAGAAGGAAGGAAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAAGGGAAGAAGGGAAGAAGGGAAGAAGGGAAGAAGGAAGGAAG  100

seq1  GAAGAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGA  150

seq1  AGGAAGGGAAGAATGGAAGAAGGAAGGAAGGGAAGAATGGAAGAAGGAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGAAGAATGGAAGAAGGAAGGAAGGGAAGAATGGAAGAAGGAAG  200

seq1  GAAGGAAGAATGGTAGGAAGTTCAAGAAAGAACCCTCCTTCATGGGAGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGAATGGTAGGAAGTTCAAGAAAGAACCCTCCTTCATGGGAGGG  250

seq1  TTAACATTGTTCTATGTGCCCAATGTTATTATGAAGACAGAAGCTTTAGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTGTTCTATGTGCCCAATGTTATTATGAAGACAGAAGCTTTAGC  300

seq1  TGTTCCCCACTGGTGTAGGAACACACAGAGACTGCAGAAAGTGGTACAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCCACTGGTGTAGGAACACACAGAGACTGCAGAAAGTGGTACAGA  350

seq1  AGGCTGGACTCACCAAAAAAGGCAGCTCTGCTTCTAGGAGAAAGAGGTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGACTCACCAAAAAAGGCAGCTCTGCTTCTAGGAGAAAGAGGTCT  400

seq1  AATGCTTTTCCAAGACTGTGTTCTCTCCTTCTAACTCCTGCCATGAAGCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTTCCAAGACTGTGTTCTCTCCTTCTAACTCCTGCCATGAAGCT  450

seq1  CAGCAGAGAGCATGCATAAGAGAAAGGTGCATGGTCCTGCTCCAGAACAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGAGCATGCATAAGAGAAAGGTGCATGGTCCTGCTCCAGAACAG  500

seq1  CTGATCCTTCAGACCGGAGGTGGGCTTCAGAGGTAAACCCCTAAATCTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCTTCAGACCGGAGGTGGGCTTCAGAGGTAAACCCCTAAATCTCT  550

seq1  CCCACATGACTGTGTGCCCTTATTAGGTAGGACACAGTCTCAGTAAGCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATGACTGTGTGCCCTTATTAGGTAGGACACAGTCTCAGTAAGCTT  600

seq1  CATTTTTCTCCTCAGTTATACTGACACCTCATTCACCTTGAAGAGCTACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTCCTCAGTTATACTGACACCTCATTCACCTTGAAGAGCTACT  650

seq1  AAGAGGAATGAATTC  663
      |||||||||||||||
seq2  AAGAGGAATGAATTC  665