BAC Information

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BAC

Clone NameB6Ng01-182E12
Chromosome2 (Build37)
Map Location 43,464,943 - 43,466,014
singlet/doubletsinglet
Overlap geneKynu
Upstream geneLrp1b, LOC100041228, LOC100041245
Downstream geneArhgap15, Gtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182E12.bB6Ng01-182E12.g
ACCGA008216GA008217
length1,064836
definitionB6Ng01-182E12.b B6Ng01-182E12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatccccagcaccaatgttaaaacgctggccacagccacaggt
gtttctgtcactcaatcaacgtaaggaggaagagacagaagggttttggg
ggcttgctgaccagccatcatagttcataagaaaatgacaagctcaggtt
cagtgagcaacaccttctctcagagataaggtggatgtgattgagtatga
cccttgacatgttgctctgaccactgtatatgcgcatagatctgtgcaac
atgtgtgcccgcacatccccccccccccacacacacttaattctgaatac
tgaatgataaggaaaaaatacagaaacctgataaatatctaactggtaaa
atcaatttgtaaaaattcaatgacaccaaagcaatatccacatatggatg
gtcaccctcttcagcataaatccaaatttttctttgaaacgctttacctt
ctgtgagttcactaatcaatggttgattaagatttcgaccaaaaccttgg
ctacaatggttggcatcaactcccaagaacagttactgtatcataccaat
aatgcttgtgtcgagtatcaagacttgaagtcagtttaaatgctttaata
ataaactatctcaaataatacatcggcgtcacattaacggacaaaaatca
aagctttttcccttgtgtcatttaaccaagcgagatcccagatttgaatt
ctctattcgttcacctgtgttttctgtccagtctgaatctatgccctttg
gaaaccctgtcttgtgaatgtgtccgtatatcagtctgtatgtcagaatg
tgtctgtacttaacaaaggatttttctcttttcatttaacaccacagaaa
gcatcacatgggggagggaatgagaaactttaaagaaatcttttaacaga
gttttacaaaggattaagtcactgactccagctcaccccactcacccaga
caatgaacagttattgcaaatatcattgtcttaaatgcagtagcgtatac
tgcttatctacaacatttgtggtgatattttattttataaggatgcttcc
gcttcatgctattt

gaattctatccttttctctctcccataatgctcactctaatctcagtacc
aaggatcagtgactggctagtactcgtttgaaaaataagagtcctttaaa
aattaaattatatttctagcaaggaactgttttgagctttctgaaataaa
agtcctctatcaaccaaaaacaaacaaaagacgaattaaccatctctcct
cctccctgtacaatcagactgtcctcccacacatggtgtatgatggaaat
gaaactaatggcaagcaattgctcaggatgggtttcgcaaacttataaca
agacttagaattcaagcagaacaaaaagtatgcctctcttcccagtgatg
gccaactaggccatcttctgctacatatgtagctagagatacaagctctg
ggggcactggctagttcatattgatgttccacctatagggttgcagaccc
cttcagctccttgggtgctttctttagcttctccattgggggccttgtgt
tccatcctatagatgactgtgagcatccacttctgtatttgacaggcact
ggcatagcctcacatgagacagctataacagggtcccctcagcaaaatct
tcctggcatatgcaatagtgtctgggtttggtggctgattatgggatgga
cccctgggtggggtagtctctgcatagtccatcctttcatctcagctcca
aactttgtctctgtaactcctttcatgggtattatgttccctattctaag
gaggaatgaaatattgcaactttatatgcctcagtacagggggattgcca
gggccaagaagcaggagtgggtgggttaggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43464943_43466014
seq2: B6Ng01-182E12.b_41_1104

seq1  GAATTCAAATCCCCAGCACCAATGTTAAAACGCTGGCCACAGCCACAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCCCCAGCACCAATGTTAAAACGCTGGCCACAGCCACAGGT  50

seq1  GTTTCTGTCACTCAATCAACGTAAGGAGGAAGAGACAGAAGGGTTTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTCACTCAATCAACGTAAGGAGGAAGAGACAGAAGGGTTTTGGG  100

seq1  GGCTTGCTGACCAGCCATCATAGTTCATAAGAAAATGACAAGCTCAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCTGACCAGCCATCATAGTTCATAAGAAAATGACAAGCTCAGGTT  150

seq1  CAGTGAGCAACACCTTCTCTCAGAGATAAGGTGGATGTGATTGAGTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCAACACCTTCTCTCAGAGATAAGGTGGATGTGATTGAGTATGA  200

seq1  CCCTTGACATGTTGCTCTGACCACTGTATATGCGCATAGATCTGTGCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGACATGTTGCTCTGACCACTGTATATGCGCATAGATCTGTGCAAC  250

seq1  ATGTGTGCCCGCACATCCCCCCCCCCCCACACACACTTAATTCTGAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCCCGCACATCCCCCCCCCCCCACACACACTTAATTCTGAATAC  300

seq1  TGAATGATAAGGAAAAAATACAGAAACCTGATAAATATCTAACTGGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATAAGGAAAAAATACAGAAACCTGATAAATATCTAACTGGTAAA  350

seq1  ATCAATTTGTAAAAATTCAATGACACCAAAGCAATATCCACATATGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTGTAAAAATTCAATGACACCAAAGCAATATCCACATATGGATG  400

seq1  GTCACCCTCTTCAGCATAAATCCAAATTTTTCTTTGAAACGCTTTACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCTCTTCAGCATAAATCCAAATTTTTCTTTGAAACGCTTTACCTT  450

seq1  CTGTGAGTTCACTAATCAATGGTTGATTAAGATTTCGACCAAAACCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTTCACTAATCAATGGTTGATTAAGATTTCGACCAAAACCTTGG  500

seq1  CTACAATGGTTGGCATCAACTCCCAAGAACAGTTACTGTATCATACCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATGGTTGGCATCAACTCCCAAGAACAGTTACTGTATCATACCAAT  550

seq1  AATGCTTGTGTCGAGTATCAAGACTTGAAGTCAGTTTAAATGCTTTAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTGTGTCGAGTATCAAGACTTGAAGTCAGTTTAAATGCTTTAATA  600

seq1  ATAAACTATCTCAAATAATACATCGGCGTCACATTAACGGACAAAAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTATCTCAAATAATACATCGGCGTCACATTAACGGACAAAAATCA  650

seq1  AAGCTTTTTCCCTTGTGTCATTTAACCAAGCGAGATCCCAGATTTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTTCCCTTGTGTCATTTAACCAAGCGAGATCCCAGATTTGAATT  700

seq1  CTCTATTCGTTCACCTGTGTTTTCTGTCCAGTCTGAATCTATGCCCTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCGTTCACCTGTGTTTTCTGTCCAGTCTGAATCTATGCCCTTTG  750

seq1  GAAACCCTGTCTTGTGAATGTGTCCGTATATCAGTCTGTATGTCAGAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTCTTGTGAATGTGTCCGTATATCAGTCTGTATGTCAGAATG  800

seq1  TGTCTGTACTTAACAAAGGATTTTTCTCTTTTCATTTAACACCACAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTACTTAACAAAGGATTTTTCTCTTTTCATTTAACACCACAGAAA  850

seq1  GCATCACATGGGGGAGGGAATGAGAAACTTTAAAGAAATC-TTTAACAGA  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCATCACATGGGGGAGGGAATGAGAAACTTTAAAGAAATCTTTTAACAGA  900

seq1  GTTTTACAAAGGATTAAGTCACTGACTCCAGCTCACCCCAACTCACCCAG  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTTTACAAAGGATTAAGTCACTGACTCCAGCTCACCCC-ACTCACCCAG  949

seq1  ACAATGAACAG-TATTGCAAATATCATTGTCTTAAATGCAGTAGCCGTAT  998
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  ACAATGAACAGTTATTGCAAATATCATTGTCTTAAATGCAGTAG-CGTAT  998

seq1  ACTGCTTATCTTACAACATTTGTGGTGGATAATTTTAATTTTATAAGGAT  1048
      |||||||||| ||||||||||||||| ||||  ||| |||||||||||||
seq2  ACTGCTTATC-TACAACATTTGTGGT-GATA--TTTTATTTTATAAGGAT  1044

seq1  GCTTCCGGCCTTCATTGTCTATTT  1072
      |||||||  ||||||   ||||||
seq2  GCTTCCG--CTTCAT--GCTATTT  1064


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