BAC Information

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BAC

Clone NameB6Ng01-182G22
Chromosome2 (Build37)
Map Location 82,973,630 - 82,974,743
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
Downstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182G22.bB6Ng01-182G22.g
ACCGA008322GA008323
length1,1141,181
definitionB6Ng01-182G22.b B6Ng01-182G22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcattcaatgtattttggagattgtaatttttcatgtactt
tcccctatgtgaatggcataagaccaatcaatagacttgataatgcatgc
atctaattatagtcgtttgtcaattcttagactggactaaaagattactt
attaacatatattcttctttgtttacttggggtcttttgtttgtttattc
atttatttattttgtcattgttttttgttgttgtttttctattaatcaag
aggacccaaaccttactcaggtaaagagtaaaagaaataagcatttagta
ttttgtcagtgtcttgttagcatatctgtatcttttgggaatgagaatga
atgaagacagtattaaaatcaatagaagtaagaaaaagttctaaataaac
agcaaaaagttagaaaaaatgtagtcctttcaaagctctgttaaagacta
tcagacctagatttatgatacaaaattgaaacaagtgtcagattttacat
ggaagatttttttgttccttatttattttttattagtaccaataaagatt
ttctttatatttccatatgtgtttaagatgcatattttgattatatagag
ttcctctgttaaagtttttattaatttatttattcactttatatcccaat
atcagcccctgtcacctcccaggaccccctcacacgaatcctccctcaat
tcctccctcctcttctcctctgagaaaggggtgaccctgtatcaccccca
ccctctgtacattccctccccaccctcctacccactgttcttccattccc
tggcatctgaaatcactgcaggactaggtgcatcctctttcactgaggcc
agacaacacagcgcagttaggaaaaataagatccacaggcaggcaataga
tttcacagacaacccctgcttcactttgtttgggagaccacatgaagatc
aagctgcacatctcttacattaaacacagggaacctaggtacactttttt
tgttggttagagcctccaagcaccagatgagttgaagctacagtcttcct
gtgagtctctgtcctcttgggttcccacagtccttcaggactcacaatga
aagattctgatgaa
gaattctcacctgaggaataccaaatggctgagaagcacctgaaataatg
aaaaaatgctcagcatcttttatcatcagagaaatgcaaatcaaaacaac
cctgagattccatctcacacccgtcagaatggctaaaatcaaaaattcag
gtgacagcagatgctggcgaggatgtggagatagaggaacactcctccat
tgttggtgggatttcaagcttgtacaattactctggttgttcagtctggt
ggttcctcagaaaattggacatggtacaaccggaggatcccacaatacct
ctcctgggcttatatccagaagatgtcccaacctttaagaatgacccatg
ctccactatgttcatagcagccttatttataatagccagaagctggaaaa
acccagatgcccctcaacagaggaatggatataaagaatgtggtacattt
acacaatggagtactactcagctattaaaatgaaagaatttatgaaattc
ctaggcaaatcgatggacctggagggcatcatcctgagtgaggtaaccca
atcacaaaagaactcaaatgatatatactcactgataaatggatattagc
ccagaaacttagtatacctgagatataagagacaatttataaaacacatg
aaactgaagaagaacgaagaccaaagtgtggacactttgccccttcttag
aattggaaacaattacccatggaaaaagttgcagagacaaagtttggagc
tgcgacaaaaggatggaccatctagagactgccatatccagggatccatc
ccataactagcctccaaacgatgacaccattgcatacactagcaagattt
tgctgaaaggatcctgatatagctgtctctgtgagactaccccgggccta
gcaaacacagaagtggatgctcacagtcagcttattggatggatcacagg
gcccatggaggagctagaagaagtattccaggagctaaagagatcttgca
ccctctagggtggacacatatgaactaacagtaccccggagctcttgact
tctagctgcaatgtatcaaagatgggcttagtcgccatcactgaaaggag
aggtccaattgggtacaccaaactttaatgcctgagtacaggcatgtcaa
ggtccaaaaaaatgggtgcacacgtggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_82973630_82974743
seq2: B6Ng01-182G22.b_44_1157

seq1  GAATTCAATTCATTCAATGTATTTTGGAGATTGTAATTTTTCATGTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCATTCAATGTATTTTGGAGATTGTAATTTTTCATGTACTT  50

seq1  TCCCCTATGTGAATGGCATAAGACCAATCAATAGACTTGATAATGCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATGTGAATGGCATAAGACCAATCAATAGACTTGATAATGCATGC  100

seq1  ATCTAATTATAGTCGTTTGTCAATTCTTAGACTGGACTAAAAGATTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTATAGTCGTTTGTCAATTCTTAGACTGGACTAAAAGATTACTT  150

seq1  ATTAACATATATTCTTCTTTGTTTACTTGGGGTCTTTTGTTTGTTTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATATATTCTTCTTTGTTTACTTGGGGTCTTTTGTTTGTTTATTC  200

seq1  ATTTATTTATTTTGTCATTGTTTTTTGTTGTTGTTTTTCTATTAATCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTTGTCATTGTTTTTTGTTGTTGTTTTTCTATTAATCAAG  250

seq1  AGGACCCAAACCTTACTCAGGTAAAGAGTAAAAGAAATAAGCATTTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCAAACCTTACTCAGGTAAAGAGTAAAAGAAATAAGCATTTAGTA  300

seq1  TTTTGTCAGTGTCTTGTTAGCATATCTGTATCTTTTGGGAATGAGAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAGTGTCTTGTTAGCATATCTGTATCTTTTGGGAATGAGAATGA  350

seq1  ATGAAGACAGTATTAAAATCAATAGAAGTAAGAAAAAGTTCTAAATAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACAGTATTAAAATCAATAGAAGTAAGAAAAAGTTCTAAATAAAC  400

seq1  AGCAAAAAGTTAGAAAAAATGTAGTCCTTTCAAAGCTCTGTTAAAGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAAGTTAGAAAAAATGTAGTCCTTTCAAAGCTCTGTTAAAGACTA  450

seq1  TCAGACCTAGATTTATGATACAAAATTGAAACAAGTGTCAGATTTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCTAGATTTATGATACAAAATTGAAACAAGTGTCAGATTTTACAT  500

seq1  GGAAGATTTTTTTGTTCCTTATTTATTTTTTATTAGTACCAATAAAGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTTTTTTGTTCCTTATTTATTTTTTATTAGTACCAATAAAGATT  550

seq1  TTCTTTATATTTCCATATGTGTTTAAGATGCATATTTTGATTATATAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATATTTCCATATGTGTTTAAGATGCATATTTTGATTATATAGAG  600

seq1  TTCCTCTGTTAAAGTTTTTATTAATTTATTTATTCACTTTATATCCCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTTAAAGTTTTTATTAATTTATTTATTCACTTTATATCCCAAT  650

seq1  ATCAGCCCCTGTCACCTCCCAGGACCCCCTCACACGAATCCTCCCTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCCCTGTCACCTCCCAGGACCCCCTCACACGAATCCTCCCTCAAT  700

seq1  TCCTCCCTCCTCTTCTCCTCTGAGAAAGGGGTGACCCTGTATCACCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTCCTCTTCTCCTCTGAGAAAGGGGTGACCCTGTATCACCCCCA  750

seq1  CCCTCTGTACATTCCCTCCCCACCCTCCTACCCACTGTTCTTCCATTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTACATTCCCTCCCCACCCTCCTACCCACTGTTCTTCCATTCCC  800

seq1  TGGCATCTGAAATCACTGCAGGACTAGGTGCATCCTCTTTCACTGAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTGAAATCACTGCAGGACTAGGTGCATCCTCTTTCACTGAGGCC  850

seq1  AGACAACACAGCGCAGTTAGG-AAAATAAGATCCACAGGCAGGCAATAGA  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGACAACACAGCGCAGTTAGGAAAAATAAGATCCACAGGCAGGCAATAGA  900

seq1  -TTCACAGACAACCCCTGCTCCACTT--GTTGGGAGACCCACATGAAGAT  946
       ||||||||||||||||||| |||||   |||||||| ||||||||||||
seq2  TTTCACAGACAACCCCTGCTTCACTTTGTTTGGGAGA-CCACATGAAGAT  949

seq1  CAAGCTGCACATCTCTTACA-TAAACACAGGGAACCTAGGTACAC-TTTT  994
      |||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  CAAGCTGCACATCTCTTACATTAAACACAGGGAACCTAGGTACACTTTTT  999

seq1  TTGTTGGTAGGAGCCTCCAAGGCACCAGATGAGTTGAAGCTAACAGTCTT  1044
      ||||||||  |||||||||| |||||||||||||||||||| ||||||||
seq2  TTGTTGGTTAGAGCCTCCAA-GCACCAGATGAGTTGAAGCT-ACAGTCTT  1047

seq1  CCTGTGGAGTCTCTGTCCTCTTTGGGTCCCACAGTCCTTCCAGGAACTCA  1094
      ||||| |||||||||||||||| || ||||||||||||| |||| |||||
seq2  CCTGT-GAGTCTCTGTCCTCTTGGGTTCCCACAGTCCTT-CAGG-ACTCA  1094

seq1  C-ATGAAAGATTCTTGATGAA  1114
      | ||||||||||| |||||||
seq2  CAATGAAAGATTC-TGATGAA  1114