BAC Information

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BAC

Clone NameB6Ng01-182O13
Chromosome2 (Build37)
Map Location 173,113,613 - 173,282,693
singlet/doubletdoublet
Overlap genenone
Upstream gene2010011I20Rik, Aurka, Cstf1, F730031O20Rik, 2410001C21Rik, A330041C17Rik, 1700029J11Rik, LOC629957, Tcfap2c, LOC100043750, Bmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai
Downstream gene1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182O13.bB6Ng01-182O13.g
ACCGA008672GA008673
length344975
definitionB6Ng01-182O13.b B6Ng01-182O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(173,282,350 - 173,282,693)(173,113,613 - 173,114,584)
sequence
acctggaggaagtggcccttggtctggatgcatcaaggccaagttcagga
gtgcgtacccagcgactgaagtcacctagtgtgtggcaggcacagcccga
ggtgcaggggccaaggaggacgtgaaacagccctaaagggagacagcttg
gttgggagtgaagggagcaccttcagagtagactcaatgcattcaggctg
atgggagctagggacatttgagggagaccttgaccatggtggtgtttgtc
atgaccatgtctcactctaagcagccacctcctgagctgatataaaaaga
ttgatcacactggtgtgtgtgtgtgtgtgtgtgtgtgagagaga
gaattcttccctgtgggtatgttcataggcaggtaggtccccgtaggcat
acatttttttgcaacccacttctaataagggttcaacctctcctttaacc
aaccccccaggagaggcagtggaagagaaaagttattaggatgggggaag
cagacctgttgagcatagctctttgggggtgagcttgatcctcctcggca
gcagtttggtcctgtagcaaacaccaaataccacccagcagcttcagtcc
aatcctctaggcaggcagacgccacacagaaccaacatctttatttcaat
cctgaagaaaccaccaggctcaccagcctgcctgaagtgaggaagaggaa
gcagcaagctgcttcaggaaccccatgagcagttcttgggcgagtttctc
tcaatggcggtggtgttacaagatgagctcaacaatgctatgtaaggtga
accaagacatgtgtgtcgttagtaaagaatagcgaggtggagcaaaccaa
accaacgttcagtgcttgtctcccatgtctgtgggatcatatttgtactc
cttcatcatggatcctttcacgtgtttgattttgctatatcaaaacatgg
tttcagccgggcatggtagcgcacgcctttaatcccagcacttgggaggc
agaggcaggcagatttctgagttcaagaccagcctggtctacagagtgag
ttccaggacagccagggctacacagagaaatcctgtctcaaaaataaaaa
caaaaccaaaaagaaaacaacaaaataaacaaaacaaaaccatgggtttc
aacctgtatctgcttcagaaaacattctttcatgtgtctgccccagcaaa
tatcattttgacataactgactttccaagaatcttagaagttccacttta
gttcccggtgtgttcctctcaggtcacccccttgtaaaggcccgagtgag
gggtcctgttgttgtatgggtatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173282350_173282693
seq2: B6Ng01-182O13.b_52_395 (reverse)

seq1  TCTCTCTCACACACACACACACACACACACACCAGTGTGATCAATCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCACACACACACACACACACACACACCAGTGTGATCAATCTTTT  50

seq1  TATATCAGCTCAGGAGGTGGCTGCTTAGAGTGAGACATGGTCATGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGCTCAGGAGGTGGCTGCTTAGAGTGAGACATGGTCATGACAAA  100

seq1  CACCACCATGGTCAAGGTCTCCCTCAAATGTCCCTAGCTCCCATCAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCATGGTCAAGGTCTCCCTCAAATGTCCCTAGCTCCCATCAGCCT  150

seq1  GAATGCATTGAGTCTACTCTGAAGGTGCTCCCTTCACTCCCAACCAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATTGAGTCTACTCTGAAGGTGCTCCCTTCACTCCCAACCAAGCT  200

seq1  GTCTCCCTTTAGGGCTGTTTCACGTCCTCCTTGGCCCCTGCACCTCGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCTTTAGGGCTGTTTCACGTCCTCCTTGGCCCCTGCACCTCGGGC  250

seq1  TGTGCCTGCCACACACTAGGTGACTTCAGTCGCTGGGTACGCACTCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCCACACACTAGGTGACTTCAGTCGCTGGGTACGCACTCCTGA  300

seq1  ACTTGGCCTTGATGCATCCAGACCAAGGGCCACTTCCTCCAGGT  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGCCTTGATGCATCCAGACCAAGGGCCACTTCCTCCAGGT  344

seq1: chr2_173113613_173114584
seq2: B6Ng01-182O13.g_67_1041

seq1  GAATTCTTCCCTGTGGGTATGTTCATAGGCAGGTAGGTCCCCGTAGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTGTGGGTATGTTCATAGGCAGGTAGGTCCCCGTAGGCAT  50

seq1  ACATTTTTTTGCAACCCACTTCTAATAAGGGTTCAACCTCTCCTTTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTTGCAACCCACTTCTAATAAGGGTTCAACCTCTCCTTTAACC  100

seq1  AACCCCCCAGGAGAGGCAGTGGAAGAGAAAAGTTATTAGGATGGGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCCAGGAGAGGCAGTGGAAGAGAAAAGTTATTAGGATGGGGGAAG  150

seq1  CAGACCTGTTGAGCATAGCTCTTTGGGGGTGAGCTTGATCCTCCTCGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTGTTGAGCATAGCTCTTTGGGGGTGAGCTTGATCCTCCTCGGCA  200

seq1  GCAGTTTGGTCCTGTAGCAAACACCAAATACCACCCAGCAGCTTCAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGTCCTGTAGCAAACACCAAATACCACCCAGCAGCTTCAGTCC  250

seq1  AATCCTCTAGGCAGGCAGACGCCACACAGAACCAACATCTTTATTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTAGGCAGGCAGACGCCACACAGAACCAACATCTTTATTTCAAT  300

seq1  CCTGAAGAAACCACCAGGCTCACCAGCCTGCCTGAAGTGAGGAAGAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGAAACCACCAGGCTCACCAGCCTGCCTGAAGTGAGGAAGAGGAA  350

seq1  GCAGCAAGCTGCTTCAGGAACCCCATGAGCAGTTCTTGGGCGAGTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAGCTGCTTCAGGAACCCCATGAGCAGTTCTTGGGCGAGTTTCTC  400

seq1  TCAATGGCGGTGGTGTTACAAGATGAGCTCAACAATGCTATGTAAGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGCGGTGGTGTTACAAGATGAGCTCAACAATGCTATGTAAGGTGA  450

seq1  ACCAAGACATGTGTGTCGTTAGTAAAGAATAGCGAGGTGGAGCAAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGACATGTGTGTCGTTAGTAAAGAATAGCGAGGTGGAGCAAACCAA  500

seq1  ACCAACGTTCAGTGCTTGTCTCCCATGTCTGTGGGATCATATTTGTACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACGTTCAGTGCTTGTCTCCCATGTCTGTGGGATCATATTTGTACTC  550

seq1  CTTCATCATGGATCCTTTCACGTGTTTGATTTTGCTATATCAAAACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCATGGATCCTTTCACGTGTTTGATTTTGCTATATCAAAACATGG  600

seq1  TTTCAGCCGGGCATGGTAGCGCACGCCTTTAATCCCAGCACTTGGGAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCGGGCATGGTAGCGCACGCCTTTAATCCCAGCACTTGGGAGGC  650

seq1  AGAGGCAGGCAGATTTCTGAGTTCAAGACCAGCCTGGTCTACAGAGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCAGATTTCTGAGTTCAAGACCAGCCTGGTCTACAGAGTGAG  700

seq1  TTCCAGGACAGCCAGGGCTACACAGAGAAATCCTGTCTCAAAAATAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGACAGCCAGGGCTACACAGAGAAATCCTGTCTCAAAAATAAAAA  750

seq1  CAAAACCAAAAAGAAAACAACAAAATAAACAAAACAAAACCAT-GGTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAAAACCAAAAAGAAAACAACAAAATAAACAAAACAAAACCATGGGTTTC  800

seq1  AACCTGTATCTGCTTCAGGAAAACATTCTTTCATGTGTCTGCCCCAGCAA  849
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  AACCTGTATCTGCTTCA-GAAAACATTCTTTCATGTGTCTGCCCCAGC-A  848

seq1  AATATCA-TTTGACATAACTGACTTTCCAAAGAATC-TAGAAGTTTCCAC  897
      ||||||| |||||||||||||||||||| ||||||| |||||| ||||||
seq2  AATATCATTTTGACATAACTGACTTTCC-AAGAATCTTAGAAG-TTCCAC  896

seq1  TTTAGTTCCCGGTGTGTT-CTCTCAGGTTCACCCCC-TGT-AAGGCCCGA  944
      |||||||||||||||||| |||||||| |||||||| ||| |||||||||
seq2  TTTAGTTCCCGGTGTGTTCCTCTCAGG-TCACCCCCTTGTAAAGGCCCGA  945

seq1  GTGA-GGGTCTTGTTGTTGTAT-GGTATGA  972
      |||| ||||| ||||||||||| |||||||
seq2  GTGAGGGGTCCTGTTGTTGTATGGGTATGA  975