BAC Information

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BAC

Clone NameB6Ng01-183D24
Chromosome2 (Build37)
Map Location 76,288,451 - 76,471,717
singlet/doubletdoublet
Overlap geneOsbpl6, Prkra
Upstream geneLOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1
Downstream geneDfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183D24.bB6Ng01-183D24.g
ACCGA008928GA008929
length635450
definitionB6Ng01-183D24.b B6Ng01-183D24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,288,451 - 76,289,084)(76,471,262 - 76,471,717)
sequence
gaattcactgataagatcaaggttattaggtaagaattcttgccatttgc
tttaaatgtatgtgtgtgcatatacattctttcggtgtgatacatagcag
caagccagaccttgtgtattgtaggcagccattctcccactgaactacaa
acccatttcctatcgcaatctttttttttttttttaatttaagctatttt
catctagggctgtttatcctggagattattatatggaggattattatatc
ctaacatccctgaaaggggggggggcttgagtagtttttacaatgggaga
ggggtcttctctgaagcaggtacttttttttttcattttttattaggtat
ttagctcatttacatttccaatgctataccaaaagtcccccataccctcc
cacccccactcccctacccacccactccccctttttggccctggtgttcc
cctgtactggggcatataaagtttgcaagtccaatgggcctctctttcca
gtggtggccgactaggccatcttttgatacatacgcagctagagttaaga
gctacggggtactggttagttcataatgttgttccacctatagggttgca
gatccctttagctccttggggtactttctctagct
ccctggtgagaagatcaacctcctgaaaaggagcctcctcagtctcccga
acacagactacatccagctgcttagtgagattgccagcgagcaaggcttt
aacataacgtatttggatataggtatgctttctcgtgtgccctgacatgt
ttcttctcaggacctcatgcatctcatgctgaccttgcctttacctccca
agggctgggtgggattatgggagcaaaacaccaccatgttccacctctgt
ggatgttcatttaattcagtttatacacctgtttagtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgcgtgcacatgtgcatgtacatgcatgttta
gtgtcatgattttagcatcagaacaatgtgatatccctattcaaacctta
gtgagatgtgaagagcttgcctggcagagctgcaggctctgagaaagttg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76288451_76289084
seq2: B6Ng01-183D24.b_47_681

seq1  GAATTCACTGATAAGATCAAGGTTATTAGGTAAGAATTCTTGCCATTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGATAAGATCAAGGTTATTAGGTAAGAATTCTTGCCATTTGC  50

seq1  TTTAAATGTATGTGTGTGCATATACATTCTTTCGGTGTGATACATAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTATGTGTGTGCATATACATTCTTTCGGTGTGATACATAGCAG  100

seq1  CAAGCCAGACCTTGTGTATTGTAGGCAGCCATTCTCCCACTGAACTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGACCTTGTGTATTGTAGGCAGCCATTCTCCCACTGAACTACAA  150

seq1  ACCCATTTCCTATCGCAATCTTTTTTTTTTTTTTTAATTTAAGCTATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTCCTATCGCAATCTTTTTTTTTTTTTTTAATTTAAGCTATTTT  200

seq1  CATCTAGGGCTGTTTATCCTGGAGATTATTATATGGAGGATTATTATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGGGCTGTTTATCCTGGAGATTATTATATGGAGGATTATTATATC  250

seq1  CTAACATCCCTGAAAGGGGGGGGGGCTTGAGTAGTTTTTACAATGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATCCCTGAAAGGGGGGGGGGCTTGAGTAGTTTTTACAATGGGAGA  300

seq1  GGGGTCTTCTCTGAAGCAGGTACTTTTTTTTTTCATTTTTTATTAGGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTTCTCTGAAGCAGGTACTTTTTTTTTTCATTTTTTATTAGGTAT  350

seq1  TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCTCC  400

seq1  CACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCACTCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCC  450

seq1  CCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCA  500

seq1  GTGGTGGCCGACTAGGCCATCTTTTGATACATACGCAGCTAGAGTCAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGGTGGCCGACTAGGCCATCTTTTGATACATACGCAGCTAGAGTTAAGA  550

seq1  GCTACGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCA  600

seq1  GATCCCTTTAGCTCCTT-GGGTACTTTCTCTAGCT  634
      ||||||||||||||||| |||||||||||||||||
seq2  GATCCCTTTAGCTCCTTGGGGTACTTTCTCTAGCT  635

seq1: chr2_76471262_76471717
seq2: B6Ng01-183D24.g_66_521 (reverse)

seq1  CTACTTTCTCAGAGCCTGCAGCTCTGCCAGGCTAGCTCTTCACATCTCAC  50
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAACTTTCTCAGAGCCTGCAGCTCTGCCAGGCAAGCTCTTCACATCTCAC  50

seq1  TAAGGTTTGAATAGGGATATCACATTGTTCTGATGCTAAAATCATGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTTGAATAGGGATATCACATTGTTCTGATGCTAAAATCATGACAC  100

seq1  TAAACATGCATGTACATGCACATGTGCACGCACACACACACACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGCATGTACATGCACATGTGCACGCACACACACACACACACACA  150

seq1  CACACACACACACACTAAACAGGTGTATAAACTGAATTAAATGAACATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACTAAACAGGTGTATAAACTGAATTAAATGAACATCC  200

seq1  ACAGAGGTGGAACATGGTGGTGTTTTGCTCCCATAATCCCACCCAGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTGGAACATGGTGGTGTTTTGCTCCCATAATCCCACCCAGCCCT  250

seq1  TGGGAGGTAAAGGCAAGGTCAGCATGAGATGCATGAGGTCCTGAGAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGTAAAGGCAAGGTCAGCATGAGATGCATGAGGTCCTGAGAAGAA  300

seq1  ACATGTCAGGGCACACGAGAAAGCATACCTATATCCAAATACGTTATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCAGGGCACACGAGAAAGCATACCTATATCCAAATACGTTATGTT  350

seq1  AAAGCCTTGCTCGCTGGCAATCTCACTAAGCAGCTGGATGTAGTCTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTGCTCGCTGGCAATCTCACTAAGCAGCTGGATGTAGTCTGTGT  400

seq1  TCGGGAGACTGAGGAGGCTCCTTTTCAGGAGGTTGATCTTCTCACCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAGACTGAGGAGGCTCCTTTTCAGGAGGTTGATCTTCTCACCAGGG  450

seq1  GAATTC  456
      ||||||
seq2  GAATTC  456