BAC Information

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BAC

Clone NameB6Ng01-183I22
Chromosome2 (Build37)
Map Location 9,050,201 - 9,051,327
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672230
Downstream geneLOC100040710, LOC100040548, LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183I22.bB6Ng01-183I22.g
ACCGA009150GA009151
length1,0321,135
definitionB6Ng01-183I22.b B6Ng01-183I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactaaggaaactcgaagggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggtaaatgaaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgactaagatcaaaaactcaggtgatagt
atatgtggagaaagaggaacactcctccattgttggtgggattgcaagct
ggtacaaccactctggaaatcagtctggtggttcctcagaaaactggaca
tagcattacctgaggacccagctataccactcctgggcatatacccagaa
gattctccaacatatagcaaggagacatgctccactatgttcatagcagc
cttatttataatagccagaaactggaaaggacccagatgtccctcagcag
aggaatggatacagaaaatgtggtccacttacacaatggaatactactca
gctattaaaaatgacaaattcatgaaattgtcaggcaaatggatggaact
agaaactgtgctcctgagtgaggtagcccaatcacaaaagaacacacatg
gaatgccctcactgataagtggctattagctcagaagctccaaataacta
ggatacaattcatagaccacatgaagctcaagaaggaagatcaaagtgtg
agtgtttctgtccttcttaggggaacaaaatactcatgaaagcaaatatg
gagacaaagtgctgacactgaaggaaaggccatccagcaactgttccacc
tggggattcatcccagatacagtttccaaactctgatgctattgtggatg
ctaaaaaaatgcttgctgaaaggagcctgatacggctttcttctgagagg
ccctgccagagccttacaaatacagagttggatgctggcagccaactatt
gcactcagtgtggggtcctaaatggaggagttagagaatggtctgaagaa
gctgaaggggttttaacccctttaggaagaacaacatatcaaccaaccag
accccccccccagaagctttcatggactaagc
gaattcataataaacatatttgaaaaacatttatgttgtactgccaaggc
aataaaaagtaatgatttggctatgatatgaagtaagtttaactctgaga
tattcaaatcttcaccttattcccagtggccagtgtatccatccatggca
cactacagtaactaacatgaataactgacactgaaaaacagagcctgctc
attcttggtgagccctttgctgccacatccttacaggaagtggaatatgt
tcagtccacacttttaataaccataagcatgagggcaaaaccgattatct
tatcaaaatctttatattttaaatatgaacacagccgtaggtatcagtcc
ttggctcacgatcatttcagtaattagacttatccgaaaacaatatttac
atgctttgatgttcaaaagaatttcctagatgcttggccaatatgaggct
catccaaaggcaattttggagttgactacctaatgtctttttcaaagttg
gtttccctgccatgttcctgaagccaaggagttcttttttagcccagtgc
aatcttcttttttatttggagtttgtgtccatctaacctaattatcaaga
acaactaattcagcttaatctcatagtaaatactctaaaatgaagataat
tgttaaaatcatcttggtaatgtattttattatgtgtgtcagatgttgtt
tagcaggcaatataattactacaatttagtttctttgagcgaatttcaac
aaatatatcactactcagttcataaatgccaaaataaattctcgtatact
gaaatctatttggtttcaatgtatgtactcagattcactataattaagag
aaagtttgtcctattttatagaggtttttttttttcttttctttttcttt
ttttccaatagaggacataagaaatcatgttgagagtcttgttcttactt
ttcaacaaggtttctctgtgtagccctgactgtcctggaacttgcttttg
tagaccaggctggccacaaatttagagattgacttacctctgctcctagt
gctaggataaaagtctttattgccaccatgtttgacttgagaagccttgc
ctcaaaatttaatttatcaaactttattttatagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_9050201_9051327
seq2: B6Ng01-183I22.g_65_1199

seq1  GAATTCATAATAAACATATTTGAAAAACATTTATGTTGTACTGCCAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATAAACATATTTGAAAAACATTTATGTTGTACTGCCAAGGC  50

seq1  AATAAAAAGTAATGATTTGGCTATGATATGAAGTAAGTTTAACTCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAAGTAATGATTTGGCTATGATATGAAGTAAGTTTAACTCTGAGA  100

seq1  TATTCAAATCTTCACCTTATTCCCAGTGGCCAGTGTATCCATCCATGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATCTTCACCTTATTCCCAGTGGCCAGTGTATCCATCCATGGCA  150

seq1  CACTACAGTAACTAACATGAATAACTGACACTGAAAAACAGAGCCTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAGTAACTAACATGAATAACTGACACTGAAAAACAGAGCCTGCTC  200

seq1  ATTCTTGGTGAGCCCTTTGCTGCCACATCCTTACAGGAAGTGGAATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGGTGAGCCCTTTGCTGCCACATCCTTACAGGAAGTGGAATATGT  250

seq1  TCAGTCCACACTTTTAATAACCATAAGCATGAGGGCAAAACCGATTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCACACTTTTAATAACCATAAGCATGAGGGCAAAACCGATTATCT  300

seq1  TATCAAAATCTTTATATTTTAAATATGAACACAGCCGTAGGTATCAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAATCTTTATATTTTAAATATGAACACAGCCGTAGGTATCAGTCC  350

seq1  TTGGCTCACGATCATTTCAGTAATTAGACTTATCCGAAAACAATATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCACGATCATTTCAGTAATTAGACTTATCCGAAAACAATATTTAC  400

seq1  ATGCTTTGATGTTCAAAAGAATTTCCTAGATGCTTGGCCAATATGAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGATGTTCAAAAGAATTTCCTAGATGCTTGGCCAATATGAGGCT  450

seq1  CATCCAAAGGCAATTTTGGAGTTGACTACCTAATGTCTTTTTCAAAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAAAGGCAATTTTGGAGTTGACTACCTAATGTCTTTTTCAAAGTTG  500

seq1  GTTTCCCTGCCATGTTCCTGAAGCCAAGGAGTTCTTTTTTAGCCCAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCTGCCATGTTCCTGAAGCCAAGGAGTTCTTTTTTAGCCCAGTGC  550

seq1  AATCTTCTTTTTTATTTGGAGTTTGTGTCCATCTAACCTAATTATCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTTTTTTATTTGGAGTTTGTGTCCATCTAACCTAATTATCAAGA  600

seq1  ACAACTAATTCAGCTTAATCTCATAGTAAATACTCTAAAATGAAGATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAATTCAGCTTAATCTCATAGTAAATACTCTAAAATGAAGATAAT  650

seq1  TGTTAAAATCATCTTGGTAATGTATTTTATTATGTGTGTCAGATGTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAATCATCTTGGTAATGTATTTTATTATGTGTGTCAGATGTTGTT  700

seq1  TAGCAGGCAATATAATTACTACAATTTAGTTTCTTTGAGCGAATTTCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGCAATATAATTACTACAATTTAGTTTCTTTGAGCGAATTTCAAC  750

seq1  AAATATATCACTACTCAGTTCATAAATGCCAAAATAAATTCTCGTATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATCACTACTCAGTTCATAAATGCCAAAATAAATTCTCGTATACT  800

seq1  GAAATCTATTTGGTTTCAATGTATGTACTCAGATTCACTATAATTAAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTATTTGGTTTCAATGTATGTACTCAGATTCACTATAATTAAGAG  850

seq1  AAAGTTTGTCCTATTTTATAGAGG-TTTTTTTTTTCTTTTCTTTTTC-TT  898
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  AAAGTTTGTCCTATTTTATAGAGGTTTTTTTTTTTCTTTTCTTTTTCTTT  900

seq1  TTTTCCAATAGAGGACATAAG-AATCATGTTGAGAGTCTTGTTCTTACTT  947
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTTCCAATAGAGGACATAAGAAATCATGTTGAGAGTCTTGTTCTTACTT  950

seq1  TTCAACAAGGTTTCTCTGTGTAGCCCTGACTGTCCTGGAACTTGC-TTTG  996
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCAACAAGGTTTCTCTGTGTAGCCCTGACTGTCCTGGAACTTGCTTTTG  1000

seq1  TAGACCAGGCTGGCCACAAATTTAGAGATTGACTTACCTCTGCCTCCCAA  1046
      |||||||||||||||||||||||||||||||||||||||||||   || |
seq2  TAGACCAGGCTGGCCACAAATTTAGAGATTGACTTACCTCTGC--TCCTA  1048

seq1  GTGCTAGGAT-AAAGTCTT--ATGCCACCATGTTTGACTTGAG-AGCCTT  1092
      |||||||||| ||||||||   ||||||||||||||||||||| ||||||
seq2  GTGCTAGGATAAAAGTCTTTATTGCCACCATGTTTGACTTGAGAAGCCTT  1098

seq1  G-CTCAAATTTTAATTTATTAAAACTTTA--TTATAGC  1127
      | |||||| ||||||||| | ||||||||  |||||||
seq2  GCCTCAAAATTTAATTTA-TCAAACTTTATTTTATAGC  1135