BAC Information

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BAC

Clone NameB6Ng01-183J06
Chromosome2 (Build37)
Map Location 81,644,948 - 81,645,681
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC103324, LOC668027, LOC100040624, LOC100040655, LOC100040704
Downstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183J06.bB6Ng01-183J06.g
ACCGA009166GA009167
length1,198889
definitionB6Ng01-183J06.b B6Ng01-183J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcctatacctcaacatgataaaggccatccacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctagaagaaatcccactaaa
atcagagactggacaaggctgtccactctctccctacctattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaatatcactttttgc
agatgatatgatagtatatataagtgaccctaaaaattccaccagaaaac
tcctaagcctgataaacagcttcaacgaaatagctggatataaaattaac
tctaacaagtcaattgcctttctgtacacacaggataaacaggctcagaa
agaaattagagaaacaacacccttctcaatagtcacaaataatataaaat
accttggcgtgactctaactaaggaagtgaaatatctgtatgataagaac
ttcaagtctctgaagaaagaaattaaagaaaatctcagaagatggaaaga
tctcccatgctcatggattggcaggatgaatatagtaaaaatgtctatct
tgccaaaagcaatcttcagattcaatgcaatccccatcaaaattccaact
caattcttcaaggaattagaaagggcaatcagcagattcatctggaataa
caaaaaacctaggatagcaaaaactcttctcaaggataaaagaacctctg
gtggaatcaccatgcctgacctaaagctgtactacagagcaattgtgata
aaaactgcatggtactggtatagcgacagacaagaagatcaatggaatag
aatcaaatacccagagatgaacccacacatctatggtcacttgatcttcg
acaagggagctaaaaccatccagtggaagaaagacagcattttcaacaat
tggtgctgtcacactggttgttatcgtgtagaagaatgggaatcgatcca
tacttattctccttgcactaaggtcaaatctacgtgatcaggaacttcca
ttaatcagagaacttaaacttaatgaggaaaagtggggtaaggccttgaa
gatttggtccaggaaaaattcctgaacagaacagcattgctgtgcctgta
agatcgagaatgacaattggacttatgaacttctataggttcgcaagcaa
agtaccgtctatggactaagtactcctacgtaatgtgtgatagggact
gaattcactttgtagaccaggctggcctcgaactcagagatcctcctgcc
tctgcctcccgagtgctgggattaaaggtgtgcgccaccatgcccggctt
gtatttgaaactttaatgctcacatttttttttgtatttggagaaaggca
atcccaagacagagggaaaagaggagaaatcccatgccaaagagtagaaa
tgtggggaattttggctactttagacaggtatacttatttttttattaga
tattttctttatttacatttcaaatgctatcccaaaagtcccctataccc
tcccctgccctgctcccctacccactcactcccacttcttggccctggca
ttcccctttactggggcatataaagtttgcaataccaaggggcctctctt
cccagtgatggctgactaggtcatcttctgatacatatgcagctagagac
atgagctctgggggtactgattagttcatattgttgtttcacctataggg
ttgcagaccccgtcagctcttgggtacattctctagctcctacattggag
gccctgggttccatcctatagatgactgtgagcatccacttctgtgtttg
ccaggcactggcaaagcctcacaaagacagctatatcagggtcctttcag
caaaatcttgctggcatatgcaataggtctgcatttgatggctgattatg
ggatggacccccagtcggggcagtctctggatggtccatcctttcgtctt
agtgccaaacttttgtctctgtaactcctttccatggatatttattccct
atttctagggaggaatgaagtatccacgtgttggtcttcattcttgattt
tcttctggttttagaagttgtatcttaggtattcgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81644948_81645681
seq2: B6Ng01-183J06.g_70_803

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAGATCCTCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAGATCCTCCTGCC  50

seq1  TCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCACCATGCCCGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCACCATGCCCGGCTT  100

seq1  GTATTTGAAACTTTAATGCTCACATTTTTTTTTGTATTTGGAGAAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGAAACTTTAATGCTCACATTTTTTTTTGTATTTGGAGAAAGGCA  150

seq1  ATCCCAAGACAGAGGGAAAAGAGGAGAAATCCCATGCCAAAGAGTAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAGACAGAGGGAAAAGAGGAGAAATCCCATGCCAAAGAGTAGAAA  200

seq1  TGTGGGGAATTTTGGCTACTTTAGACAGGTATACTTATTTTTTTATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGAATTTTGGCTACTTTAGACAGGTATACTTATTTTTTTATTAGA  250

seq1  TATTTTCTTTATTTACATTTCAAATGCTATCCCAAAAGTCCCCTATACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTTATTTACATTTCAAATGCTATCCCAAAAGTCCCCTATACCC  300

seq1  TCCCCTGCCCTGCTCCCCTACCCACTCACTCCCACTTCTTGGCCCTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGCCCTGCTCCCCTACCCACTCACTCCCACTTCTTGGCCCTGGCA  350

seq1  TTCCCCTTTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTT  400

seq1  CCCAGTGATGGCTGACTAGGTCATCTTCTGATACATATGCAGCTAGAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGATGGCTGACTAGGTCATCTTCTGATACATATGCAGCTAGAGAC  450

seq1  ATGAGCTCTGGGGGTACTGATTAGTTCATATTGTTGTTTCACCTATAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTCTGGGGGTACTGATTAGTTCATATTGTTGTTTCACCTATAGGG  500

seq1  TTGCAGACCCCGTCAGCTCTTGGGTACATTCTCTAGCTCCTACATTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACCCCGTCAGCTCTTGGGTACATTCTCTAGCTCCTACATTGGAG  550

seq1  GCCCTGGGTTCCATCCTATAGATGACTGTGAGCATCCACTTCTGTGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGTTCCATCCTATAGATGACTGTGAGCATCCACTTCTGTGTTTG  600

seq1  CCAGGCACTGGCAAAGCCTCACAAAGACAGCTATATCAGGGTCCTTTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCACTGGCAAAGCCTCACAAAGACAGCTATATCAGGGTCCTTTCAG  650

seq1  CAAAATCTTGCTGGCATATGCAATAGGTCTGCATTTGATGGCTGATTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCTTGCTGGCATATGCAATAGGTCTGCATTTGATGGCTGATTATG  700

seq1  GGATGGACCCCCAGTCGGGGCAGTCTCTGGATGG  734
      ||||||||||||||||||||||||||||||||||
seq2  GGATGGACCCCCAGTCGGGGCAGTCTCTGGATGG  734