BAC Information

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BAC

Clone NameB6Ng01-183K03
Chromosome2 (Build37)
Map Location 88,342,600 - 88,407,536
singlet/doubletdoublet
Overlap geneOlfr1186, Olfr1187-ps1, Olfr1188
Upstream genePramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1
Downstream geneLOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183K03.bB6Ng01-183K03.g
ACCGA009208GA009209
length1,142633
definitionB6Ng01-183K03.b B6Ng01-183K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,406,384 - 88,407,536)(88,342,600 - 88,343,179)
sequence
ggaattctcattttaatattacatgtcttccttagctcaacataattaat
tctcctctgttgattttttttacatcatgttgtgatttccctcactttga
catcaagtatttctcttgctacagaaaaaaacagctcagccttctttgta
cctttttttagagtaagcaagcatagttttctgttgtagggagacaatta
ttgacaactagacttccatcacttgtttgcctgctacccttttcattact
gtcatccatggcattttttacttaaacttgcagaggtggcatcttcctca
tacaacaataatattatattgccttccttcccccaatatcatggtgtgtt
tattatgtaataaagtttctaaggatggctaatttactatatttccattt
tcaattctgtaacatttgtataccaatcacataactgaactcaatttatt
ctttaaaattgatattattcaaggaaaactcttttcaaccatgaggcctt
agcaagcctggtgccagggttggctgttaatccacatgcatcctatttta
aaataccacataccattttcttctctactatttcagttaatatgtatgat
gtagctaatttccagagttgaaccatatcttgaactaccaattctgtgtt
aagccacaggcatcagatttctattatttaacaattttgaataacttgtt
aaagtatactaaaaaaaaacaatttataaattttttatctcagaattctt
cattaagagataattacacacatgaattttaatataatgtaatttatttg
cacattaaagtacaattacaaatatgtttggtgagttaaatattaaaaaa
tattaataacatctcatattagtggtaagatcaataatattcaagcaaat
gttaatatctctccagttttatctctattacctctttgacatccaaaaat
ccagttacctgataaatccagtgtaaaatataaaattataaatatgtaca
gtttaagttgcctaagccaaaatcaaaagacaaaaatcagccctggcaag
gatgttcttgtatgatgatcttcttgtgatgagttgcaatcaaaacagaa
aaacaacaatatgcatggggagtgatatagaaacagagttcc
gaattctatgtagttttccatgaatagtgagtggcatttgtcaatttctt
tctagtcctttgaataacactttacagtaggctcatagttttcaagggga
ggttccaaggctggacaatcttactgaggctatggaggacccaccgaaag
ggatctatcatgaatgccttctgaaagacttaacaagcagctgaaagagt
aagatgcagatatttgcacccaaccaatggacaaaaactgctgtcccctg
ttgttgaattgagaaaaggcaggaggaggctgaggaagagggcaaccctg
taggaagaccagcagtctcaattaatcttgacccctgaggtctctcaaac
actggactaccaaccaggcagcatacaccagctgatatgaacccgccccc
acccacccacccacacatacagtagaggactgctgggtctgagttcagtc
agagaagatccacctaaccctcaagaaactggaggccctagggaatttag
agttctggtggggtgggggttggggccatcctcatggagtcagagggcca
gggaggagatatgggatgtgtcacagttgggagcgcggaccttgagggga
atggggtctggagtgctaaataaatgactcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88406384_88407536
seq2: B6Ng01-183K03.b_48_1188 (reverse)

seq1  GGAACTCTGTTTC--TATCACTCCCCATGCATTATTTGTTGTTTTTTCCT  48
      |||||||||||||  |||||||||||||||||   |||||||||||  ||
seq2  GGAACTCTGTTTCTATATCACTCCCCATGCAT--ATTGTTGTTTTT--CT  46

seq1  GTTTTGATTTCCAACTCATCACAAGAAGGATTCATTCCATACAAGAACAT  98
      ||||||| || |||||||||||||||||   ||||  |||||||||||||
seq2  GTTTTGA-TTGCAACTCATCACAAGAAG--ATCAT--CATACAAGAACAT  91

seq1  CCCTGCCAGGGCTGGATTTTTGGTCTTTTTGATTTTGGCTTAGGCAACTT  148
      || |||||||||| ||||||| ||| ||||||||||||||||||||||||
seq2  CCTTGCCAGGGCT-GATTTTT-GTC-TTTTGATTTTGGCTTAGGCAACTT  138

seq1  AAACTGTACAATATTTATAATTTTATATTTTTACACTGGATTTATCAGGT  198
      ||||||||| ||||||||||||||||| ||||||||||||||||||||||
seq2  AAACTGTAC-ATATTTATAATTTTATA-TTTTACACTGGATTTATCAGGT  186

seq1  AACTGGATTTTTGGATGTCAAAGAGGTAATAGAGATAAAACTGGAGAGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATTTTTGGATGTCAAAGAGGTAATAGAGATAAAACTGGAGAGAT  236

seq1  ATTAACATTTGCTTGAATATTATTGATCTTACCACTAATATGAGATGTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATTTGCTTGAATATTATTGATCTTACCACTAATATGAGATGTTA  286

seq1  TTAATATTTTTTAATATTTAACTCACCAAACATATTTGTAATTGTACTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTTTTTAATATTTAACTCACCAAACATATTTGTAATTGTACTTT  336

seq1  AATGTGCAAATAAATTACATTATATTAAAATTCATGTGTGTAATTATCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCAAATAAATTACATTATATTAAAATTCATGTGTGTAATTATCTC  386

seq1  TTAATGAAGAATTCTGAGATAAAAAATTTATAAATTGTTTTTTTTTAGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAGAATTCTGAGATAAAAAATTTATAAATTGTTTTTTTTTAGTA  436

seq1  TACTTTAACAAGTTATTCAAAATTGTTAAATAATAGAAATCTGATGCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAACAAGTTATTCAAAATTGTTAAATAATAGAAATCTGATGCCTG  486

seq1  TGGCTTAACACAGAATTGGTAGTTCAAGATATGGTTCAACTCTGGAAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAACACAGAATTGGTAGTTCAAGATATGGTTCAACTCTGGAAATT  536

seq1  AGCTACATCATACATATTAACTGAAATAGTAGAGAAGAAAATGGTATGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATCATACATATTAACTGAAATAGTAGAGAAGAAAATGGTATGTG  586

seq1  GTATTTTAAAATAGGATGCATGTGGATTAACAGCCAACCCTGGCACCAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAAATAGGATGCATGTGGATTAACAGCCAACCCTGGCACCAGG  636

seq1  CTTGCTAAGGCCTCATGGTTGAAAAGAGTTTTCCTTGAATAATATCAATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAAGGCCTCATGGTTGAAAAGAGTTTTCCTTGAATAATATCAATT  686

seq1  TTAAAGAATAAATTGAGTTCAGTTATGTGATTGGTATACAAATGTTACAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATAAATTGAGTTCAGTTATGTGATTGGTATACAAATGTTACAG  736

seq1  AATTGAAAATGGAAATATAGTAAATTAGCCATCCTTAGAAACTTTATTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAAATGGAAATATAGTAAATTAGCCATCCTTAGAAACTTTATTAC  786

seq1  ATAATAAACACACCATGATATTGGGGGAAGGAAGGCAATATAATATTATT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAACACACCATGATATTGGGGGAAGGAAGGCAATATAATATTATT  836

seq1  GTTGTATGAGGAAGATGCCACCTCTGCAAGTTTAAGTAAAAAATGCCATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATGAGGAAGATGCCACCTCTGCAAGTTTAAGTAAAAAATGCCATG  886

seq1  GATGACAGTAATGAAAAGGGTAGCAGGCAAACAAGTGATGGAAGTCTAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAGTAATGAAAAGGGTAGCAGGCAAACAAGTGATGGAAGTCTAGT  936

seq1  TGTCAATAATTGTCTCCCTACAACAGAAAACTATGCTTGCTTACTCTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATAATTGTCTCCCTACAACAGAAAACTATGCTTGCTTACTCTAAA  986

seq1  AAAAGGTACAAAGAAGGCTGAGCTGTTTTTTTCTGTAGCAAGAGAAATAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTACAAAGAAGGCTGAGCTGTTTTTTTCTGTAGCAAGAGAAATAC  1036

seq1  TTGATGTCAAAGTGAGGGAAATCACAACATGATGTAAAAAAAATCAACAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTCAAAGTGAGGGAAATCACAACATGATGTAAAAAAAATCAACAG  1086

seq1  AGGAGAATTAATTATGTTGAGCTAAGGAAGACATGTAATATTAAAATGAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATTAATTATGTTGAGCTAAGGAAGACATGTAATATTAAAATGAG  1136

seq1  AATTC  1153
      |||||
seq2  AATTC  1141

seq1: chr2_88342600_88343179
seq2: B6Ng01-183K03.g_62_641

seq1  GAATTCTATGTAGTTTTCCATGAATAGTGAGTGGCATTTGTCAATTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTAGTTTTCCATGAATAGTGAGTGGCATTTGTCAATTTCTT  50

seq1  TCTAGTCCTTTGAATAACACTTTACAGTAGGCTCATAGTTTTCAAGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCTTTGAATAACACTTTACAGTAGGCTCATAGTTTTCAAGGGGA  100

seq1  GGTTCCAAGGCTGGACAATCTTACTGAGGCTATGGAGGACCCACCGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAAGGCTGGACAATCTTACTGAGGCTATGGAGGACCCACCGAAAG  150

seq1  GGATCTATCATGAATGCCTTCTGAAAGACTTAACAAGCAGCTGAAAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTATCATGAATGCCTTCTGAAAGACTTAACAAGCAGCTGAAAGAGT  200

seq1  AAGATGCAGATATTTGCACCCAACCAATGGACAAAAACTGCTGTCCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAGATATTTGCACCCAACCAATGGACAAAAACTGCTGTCCCCTG  250

seq1  TTGTTGAATTGAGAAAAGGCAGGAGGAGGCTGAGGAAGAGGGCAACCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATTGAGAAAAGGCAGGAGGAGGCTGAGGAAGAGGGCAACCCTG  300

seq1  TAGGAAGACCAGCAGTCTCAATTAATCTTGACCCCTGAGGTCTCTCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGACCAGCAGTCTCAATTAATCTTGACCCCTGAGGTCTCTCAAAC  350

seq1  ACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAACCCGCCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACTACCAACCAGGCAGCATACACCAGCTGATATGAACCCGCCCCC  400

seq1  ACCCACCCACCCACACATACAGTAGAGGACTGCTGGGTCTGAGTTCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCACCCACACATACAGTAGAGGACTGCTGGGTCTGAGTTCAGTC  450

seq1  AGAGAAGATCCACCTAACCCTCAAGAAACTGGAGGCCCTAGGGAATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGATCCACCTAACCCTCAAGAAACTGGAGGCCCTAGGGAATTTAG  500

seq1  AGTTCTGGTGGGGTGGGGGTTGGGGCCATCCTCATGGAGTCAGAGGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGTGGGGTGGGGGTTGGGGCCATCCTCATGGAGTCAGAGGGCCA  550

seq1  GGGAGGAGATATGGGATGTGGAACAGTTGG  580
      ||||||||||||||||||||  ||||||||
seq2  GGGAGGAGATATGGGATGTGTCACAGTTGG  580