BAC Information

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BAC

Clone NameB6Ng01-183L03
Chromosome2 (Build37)
Map Location 164,483,776 - 164,601,357
singlet/doubletdoublet
Overlap geneLOC629761, Wfdc13, Spint4, OTTMUSG00000016293, Wfdc3, Dnttip1, Ube2c
Upstream genePkig, Ada, Wisp2, Kcnk15, Rims4, Ywhab, LOC381404, Tomm34, Stk4, Kcns1, Wfdc5, Wfdc12, Wfdc15a, Wfdc15b, Svs2, Svs3b, Svs4, Svs3a, Svs6, Svs5, Slpi, Matn4, Rbpjl, Sdc4, 2610042O14Rik, 1700126L10Rik, Dbndd2, Pigt, LOC670507, Wfdc2, OTTMUSG00000016288, Wfdc6a, Spinlw1, Wfdc8, Wfdc6b, Wfdc16, OTTMUSG00000001088, Wfdc10
Downstream geneTnnc2, Snx21, Acot8, Zswim3, Zswim1, 1700020C07Rik, Neurl2, Ctsa, Pltp, F730014I05Rik, Zfp335, LOC629777, Mmp9, Slc12a5, Ncoa5, Cd40, Cdh22, Slc35c2, Elmo2, Gm1008, Zfp334, 4833422F24Rik, Slc13a3, 2810408M09Rik, Slc2a10, Eya2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183L03.bB6Ng01-183L03.g
ACCGA009255GA009256
length138883
definitionB6Ng01-183L03.b B6Ng01-183L03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(164,483,776 - 164,483,913)(164,600,477 - 164,601,357)
sequence
gaattcaagactgggaggtggctgcactggtttgtgacacttgtcaagat
tgaagcattatagcaggagaactcgtcaggaaccaggaaagggagagagg
gaagagagggagggaccgagggtgggagagagggggtg
gaattctctctcttgcccctcaacttaaaactacttgaaaatgacatgtc
tgttacatgtgtttgctggtgtgtacccatggtgtacccccaggtagaag
ctagaggacaacttctgggggccattttccctttgcactttgtggggact
gggattgaactcaatctggcttgcgggcaagcatggtacagcacctcttc
ctccttcatcatatacttcacagcttctgtcttcagcccagcctggtgct
ggggtctagaaatcaccaagggcctactatgtgctgtcagccttataact
caagccattgcttgcctggttcttataacaggtaatgtctcccctgctct
aaactacagccaagaggatccgttcgttctacacctctcatgccgctgct
gtgcccaaggattctttagcctctgttaccttcaagatgagtcttaatct
gctgcccgacccactcctctctgcagtcctggggactgaactagattctc
agtaacaggcattttgcccctggactcttccagccacctaagcattttga
tgtggctgcgagccccgaggaagtgctcttccccggaatgcttgtacccc
cggaaacacccccctttcctcccactgcagtgcttgctctacagcatctt
acactgagtccctacacgtattaagagaagatctcactctgtagcccaag
ctgggctccaactctcaatcctcctgcctcagtctgctgaatgatgggat
tacaggtgtctgctacagtacctgctcctttgctccatctctggagcatc
tctttcggcaatcccactagtaaacatttgcattctgtgtagaaaacttg
gatgtttatgtgtatgatggtgggtggtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_164483776_164483913
seq2: B6Ng01-183L03.b_40_177

seq1  GAATTCAAGACTGGGAGGTGGCTGCACTGGTTTGTGACACTTGTCAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACTGGGAGGTGGCTGCACTGGTTTGTGACACTTGTCAAGAT  50

seq1  TGAAGCATTATAGCAGGAGAACTCGTCAGGAACCAGGAAAGGGAGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCATTATAGCAGGAGAACTCGTCAGGAACCAGGAAAGGGAGAGAGG  100

seq1  GAAGAGAGGGAGGGACCGAGGGTGGGAGAGAGGGGGTG  138
      ||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGGGAGGGACCGAGGGTGGGAGAGAGGGGGTG  138

seq1: chr2_164600477_164601357
seq2: B6Ng01-183L03.g_66_948 (reverse)

seq1  CACACACCA-CCACCATCATACACAT-AACATCCAAGTTTTCTACACAGA  48
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  CACACACCACCCACCATCATACACATAAACATCCAAGTTTTCTACACAGA  50

seq1  ATGCAAATGTTTACTAGTGGGATTGCCGAAAGAGATGCTCCAGAGATGGA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATGTTTACTAGTGGGATTGCCGAAAGAGATGCTCCAGAGATGGA  100

seq1  GCAAAGGAGCAGGTACTGTAGCAGACACCTGTAATCCCATCATTCAGCAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGAGCAGGTACTGTAGCAGACACCTGTAATCCCATCATTCAGCAG  150

seq1  ACTGAGGCAGGAGGATTGAGAGTTGGAGCCCAGCTTGGGCTACAGAGTGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCAGGAGGATTGAGAGTTGGAGCCCAGCTTGGGCTACAGAGTGA  200

seq1  GATCTTCTCTTAATACGTGTAGGGACTCAGTGTAAGATGCTGTAGAGCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCTCTTAATACGTGTAGGGACTCAGTGTAAGATGCTGTAGAGCAA  250

seq1  GCACTGCAGTGGGAGGAAAGGGGGGTGTTTCCGGGGGTACAAGCATTCCG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCAGTGGGAGGAAAGGGGGGTGTTTCCGGGGGTACAAGCATTCCG  300

seq1  GGGAAGAGCACTTCCTCGGGGCTCGCAGCCACATCAAAATGCTTAGGTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGCACTTCCTCGGGGCTCGCAGCCACATCAAAATGCTTAGGTGG  350

seq1  CTGGAAGAGTCCAGGGGCAAAATGCCTGTTACTGAGAATCTAGTTCAGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGTCCAGGGGCAAAATGCCTGTTACTGAGAATCTAGTTCAGTC  400

seq1  CCCAGGACTGCAGAGAGGAGTGGGTCGGGCAGCAGATTAAGACTCATCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACTGCAGAGAGGAGTGGGTCGGGCAGCAGATTAAGACTCATCTT  450

seq1  GAAGGTAACAGAGGCTAAAGAATCCTTGGGCACAGCAGCGGCATGAGAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAACAGAGGCTAAAGAATCCTTGGGCACAGCAGCGGCATGAGAGG  500

seq1  TGTAGAACGAACGGATCCTCTTGGCTGTAGTTTAGAGCAGGGGAGACATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACGAACGGATCCTCTTGGCTGTAGTTTAGAGCAGGGGAGACATT  550

seq1  ACCTGTTATAAGAACCAGGCAAGCAATGGCTTGAGTTATAAGGCTGACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTATAAGAACCAGGCAAGCAATGGCTTGAGTTATAAGGCTGACAG  600

seq1  CACATAGTAGGCCCTTGGTGATTTCTAGACCCCAGCACCAGGCTGGGCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGTAGGCCCTTGGTGATTTCTAGACCCCAGCACCAGGCTGGGCTG  650

seq1  AAGACAGAAGCTGTGAAGTATATGATGAAGGAGGAAGAGGTGCTGTACCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAAGCTGTGAAGTATATGATGAAGGAGGAAGAGGTGCTGTACCA  700

seq1  TGCTTGCCCGCAAGCCAGATTGAGTTCAATCCCAGTCCCCACAAAGTGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCCCGCAAGCCAGATTGAGTTCAATCCCAGTCCCCACAAAGTGCA  750

seq1  AAGGGAAAATGGCCCCCAGAAGTTGTCCTCTAGCTTCTACCTGGGGGTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAATGGCCCCCAGAAGTTGTCCTCTAGCTTCTACCTGGGGGTAC  800

seq1  ACCATGGGTACACACCAGCAAACACATGTAACAGACATGTCATTTTCAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGTACACACCAGCAAACACATGTAACAGACATGTCATTTTCAAG  850

seq1  TAGTTTTAAGTTGAGGGGCAAGAGAGAGAATTC  881
      |||||||||||||||||||||||||||||||||
seq2  TAGTTTTAAGTTGAGGGGCAAGAGAGAGAATTC  883