BAC Information

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BAC

Clone NameB6Ng01-183P01
Chromosome2 (Build37)
Map Location 112,238,846 - 112,239,821
singlet/doubletsinglet
Overlap gene2410042D21Rik
Upstream geneLOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839
Downstream gene2900064A13Rik, Chrm5, Aven, Ryr3, 4930563P21Rik, Fmn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183P01.bB6Ng01-183P01.g
ACCGA009441GA009442
length1,196988
definitionB6Ng01-183P01.b B6Ng01-183P01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgaatggctgagaagcacctaaagaaatg
ttcaacatccttagtcatcagggaaatacaaatcaaaacaatcctgagat
tccacctcacaccattcagaatggctaagatcaaaaactcaagtgatagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagctggtacaatcactctggaaatcagtttggtggttactca
aaaaattggacaaagtacttactacctgaggacccagctataccactctt
gggcatatacccagaagacactccaacatgtaataaggacacattctcca
ctatgttcgtagcagtcttatttataagagccagaagctggaaagaactc
agatgcccctcaacataggaatggatacagaaaatgtgatacatttacac
aatggagtagtactcagctattaaaaacaatgaatttataaaattcttag
gcaaatggatggaactagaaaatatcatcctgagtgaggtaacccaatca
caaaagaacacacatgatatgaactcactagtaagtggatattagcccaa
aagtttggaatacccaagatacaattcacaagccacatgaaactcaagaa
gaaggaagaccaaagtgtggatagtttgatccttcttagaagggagtaca
aaacacccatggaggcaaaatgtggagcagagactgaaggaatgaccatc
cagagactgccccactggggatccatcccatatacaatcaccaaacccag
acacttttgtggacaccaacaagttcttgctgacagaagtctgttatagc
tgcctcctgagaggctccaccagtgcctgactaatacagaggtggatgct
cacagcctaccattggacttgagcacagggtccccaatgaaagaccaagg
agctgaaggggtttgcagccccataggaggaacacatatgaactaaccag
tacctcccaaagcttcccagggacttaagcactaacagagtacacatggt
tggggctcatgctacagctgcaatatgtagcagagatggttgaggtgccc
cttggtctgtgaagctcttatgcctcagtgtatgcaatgcgaggccagta
agcaggattgcgctggattctgtctgaagcgatcgcttagacaggc
gaattcttgtataaggagaagtgtgtctttctcaacagcttgttttgttt
tggtagagaaattgcctagttggattacgggttaagtacaacgtgaatag
tcaatgtagtatatgaatgtagagagaaagctaacttggtcttgaactgt
ccaggcatgtttcattcctgtgtaatgagtttcccttgttgtgagaaggc
agggagtatctgaacactttgagctgtttaatctcttggtttggcagcca
ttataagagtatatgaatagatccctttttatctttgaggtagaagacag
ctactgtataaagagaaatcatcccgtgagcttcattattatgctgttgt
ttttctcaatagagctactcattgaaagcattgtgatattgtaagaaaat
gcatgctatgtctgatgtttagaagttgtacacaatgttagaatagctgt
cccttctctgcttttattctcttagggtcctgcttatgttcttctttgct
tatgttcttctttgcttattaagagttgtttgtttgtttttttaatgagt
cttcaaccatttcagattcttttctttttgtgtcttatcaaatagaactt
caaaaacacagagagaacttgaaactagtttcagtagcattcctaagtgc
ttctgggggagaaagacaattctatctatattatgggtctagaaaggtgc
tattaaatgcatgagacatgggtaaaaaacagagtgtatagcttataaag
ccttattgtgatataaagtatacaccatgaaactttttaaatgtgcaatt
tactgattgtaaggacagactagaaacattctccagttcccagttagatc
tttagagcatttatttctgtcactgaaaaacctctgtgcccctgtgtagt
aactttccattccctactccaacttgagaagcaacaaacaattgggtttt
cctggctgtattttatttccctaataggtgggaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_112238846_112239821
seq2: B6Ng01-183P01.g_70_1057

seq1  GAATTCTTGTATAAGGAGAAGTGTGTCTTTCTCAACAGCTTGTTTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTATAAGGAGAAGTGTGTCTTTCTCAACAGCTTGTTTTGTTT  50

seq1  TGGTAGAGAAATTGCCTAGTTGGATTACGGGTTAAGTACAACGTGAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGAAATTGCCTAGTTGGATTACGGGTTAAGTACAACGTGAATAG  100

seq1  TCAATGTAGTATATGAATGTAGAGAGAAAGCTAACTTGGTCTTGAACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTAGTATATGAATGTAGAGAGAAAGCTAACTTGGTCTTGAACTGT  150

seq1  CCAGGCATGTTTCATTCCTGTGTAATGAGTTTCCCTTGTTGTGAGAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATGTTTCATTCCTGTGTAATGAGTTTCCCTTGTTGTGAGAAGGC  200

seq1  AGGGAGTATCTGAACACTTTGAGCTGTTTAATCTCTTGGTTTGGCAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTATCTGAACACTTTGAGCTGTTTAATCTCTTGGTTTGGCAGCCA  250

seq1  TTATAAGAGTATATGAATAGATCCCTTTTTATCTTTGAGGTAGAAGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGAGTATATGAATAGATCCCTTTTTATCTTTGAGGTAGAAGACAG  300

seq1  CTACTGTATAAAGAGAAATCATCCCGTGAGCTTCATTATTATGCTGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTATAAAGAGAAATCATCCCGTGAGCTTCATTATTATGCTGTTGT  350

seq1  TTTTCTCAATAGAGCTACTCATTGAAAGCATTGTGATATTGTAAGAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAATAGAGCTACTCATTGAAAGCATTGTGATATTGTAAGAAAAT  400

seq1  GCATGCTATGTCTGATGTTTAGAAGTTGTACACAATGTTAGAATAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTATGTCTGATGTTTAGAAGTTGTACACAATGTTAGAATAGCTGT  450

seq1  CCCTTCTCTGCTTTTATTCTCTTAGGGTCCTGCTTATGTTCTTCTTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCTGCTTTTATTCTCTTAGGGTCCTGCTTATGTTCTTCTTTGCT  500

seq1  TATGTTCTTCTTTGCTTATTAAGAGTTGTTTGTTTGTTTTTTTAATGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTTCTTTGCTTATTAAGAGTTGTTTGTTTGTTTTTTTAATGAGT  550

seq1  CTTCAACCATTTCAGATTCTTTTCTTTTTGTGTCTTATCAAATAGAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACCATTTCAGATTCTTTTCTTTTTGTGTCTTATCAAATAGAACTT  600

seq1  CAAAAACACAGAGAGAACTTGAAACTAGTTTCAGTAGCATTCCTAAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACACAGAGAGAACTTGAAACTAGTTTCAGTAGCATTCCTAAGTGC  650

seq1  TTCTGGGGGAGAAAGACAATTCTATCTATATTATGGGTCTAGAAAGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGGAGAAAGACAATTCTATCTATATTATGGGTCTAGAAAGGTGC  700

seq1  TATTAAATGCATGAGACATGGGTAAAAAACAGAGTGTATAGCTTATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATGCATGAGACATGGGTAAAAAACAGAGTGTATAGCTTATAAAG  750

seq1  CCTTATTGTGATATAAAGTATACACCATGAAAC-TTTTAAATGTGCAATT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCTTATTGTGATATAAAGTATACACCATGAAACTTTTTAAATGTGCAATT  800

seq1  TACTGATTGTAAGGACAGACTAG-AACATTCTCCAG-TCCCAG-TAGATC  846
      ||||||||||||||||||||||| |||||||||||| |||||| ||||||
seq2  TACTGATTGTAAGGACAGACTAGAAACATTCTCCAGTTCCCAGTTAGATC  850

seq1  TTTAGAGCATTTATTTCTGTCACTGAAAAA-CTCTGTGCCCCTGTGTAGT  895
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTAGAGCATTTATTTCTGTCACTGAAAAACCTCTGTGCCCCTGTGTAGT  900

seq1  AAC-TTCCATT-CCTACTCCAACTTGAGAAGCAACAAACAATTGG--TTT  941
      ||| ||||||| |||||||||||||||||||||||||||||||||  |||
seq2  AACTTTCCATTCCCTACTCCAACTTGAGAAGCAACAAACAATTGGGTTTT  950

seq1  TCTGGCTGTATTTTATTTCC--TATAAGT-GGAATTTT  976
       |||||||||||||||||||   ||| || ||||||||
seq2  CCTGGCTGTATTTTATTTCCCTAATAGGTGGGAATTTT  988