BAC Information

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BAC

Clone NameB6Ng01-184B08
Chromosome2 (Build37)
Map Location 114,579,990 - 114,740,383
singlet/doubletdoublet
Overlap geneLOC100043222
Upstream geneGrem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770, Atpbd4, LOC100043219
Downstream geneLOC100043232, LOC100043236, BC052040, Mrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184B08.bB6Ng01-184B08.g
ACCGA009548GA009549
length2801,123
definitionB6Ng01-184B08.b B6Ng01-184B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,579,990 - 114,580,269)(114,739,260 - 114,740,383)
sequence
ttggattccaaacttttgtgtagtagaaagccatctacctgtagatttca
gaacctctttctatatatacactttgtttatagtcacaacctccaaaaca
tgatgcttgacacactcattctcacatagccctcagcctagtcattctca
gaagattttccattgctttggtttctttgctcataatgttctccagtgga
catcactacatttctccttctcctccttctccttctccttctccttctcc
ttctccttctccttctcctcctcctcctcc
gaattccccccattatgcttctgagaagctgaggtccagatcgcatgaag
aacttagagtgacagatttggggttataagacagggttttagtttcctct
ttctttcttcttatattgtgtgatgatctttattatttactgtattcttc
ggtgactatgaccccacattatcaaaacaaaacaaaacaaaaaaacaaac
cacaacaataaacaaaacaatacaaaacaaaaacacaccaaattggagga
ggtaattaaacccacataaacaaatcactagaaaaaccactaatgagaat
gaaaaatgtttttcttcctgtaaggagaatgcaacagaaaaaaaaaaaac
ggtaactctgttgggcaagaccccaacatagaaaacacgcaaggatgctt
tgaattgaagactgaagtggaagtgagaggtgagaccacaaaatggagat
ttggaagtcacctctggatgtgaatctgagagtgaacaaggtcttagaaa
agatgtcagttgaaaagttaggatccattaactcaacatgatttattttg
cccacatttattatattactgaagttaggccggtaacacaaacagattac
ttcatgactttctcttatcaatcttaatgacccaggaacacaggatgaag
aaaatgagatagattaaggagaattttaaaccatcaaggctcaccatagg
ctgaatcctttctcataatgagcaggcacataaacataactggaaccaga
ctacagtgcatgctttgaataagaaaccatgccattctaaaataggaacc
tcctttcttttgaatgctttgccatcatggatgaaaaggaccagtgctga
tataaacacagtccagaaggatgatgtcatgggtattaattcttcattac
tatttgacttacttgggatcttttgttatcttgacattaagttttgctag
caacttgaacttagggttattattctcctctaatcaagtgtaaaggaaga
tatcagacattagtgcactatgggcggttactgtgctccactctgcaaca
gttcctttcactaaaagaatacgattaagggtttccttatagattcataa
acattctctacacaccttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114579990_114580269
seq2: B6Ng01-184B08.b_50_329

seq1  TTGGATTCCAAACTTTTGTGTAGTAGAAAGCCATCTACCTGTAGATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCCAAACTTTTGTGTAGTAGAAAGCCATCTACCTGTAGATTTCA  50

seq1  GAACCTCTTTCTATATATACACTTTGTTTATAGTCACAACCTCCAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTTTCTATATATACACTTTGTTTATAGTCACAACCTCCAAAACA  100

seq1  TGATGCTTGACACACTCATTCTCACATAGCCCTCAGCCTAGTCATTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTGACACACTCATTCTCACATAGCCCTCAGCCTAGTCATTCTCA  150

seq1  GAAGATTTTCCATTGCTTTGGTTTCTTTGCTCATAATGTTCTCCAGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTTTCCATTGCTTTGGTTTCTTTGCTCATAATGTTCTCCAGTGGA  200

seq1  CATCACTACATTTCTCCTTCTCCTCCTTCTCCTTCTCCTTCTCCTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTACATTTCTCCTTCTCCTCCTTCTCCTTCTCCTTCTCCTTCTCC  250

seq1  TTCTCCTTCTCCTTCTCCTCCTCCTCCTCC  280
      ||||||||||||||||||||||||||||||
seq2  TTCTCCTTCTCCTTCTCCTCCTCCTCCTCC  280

seq1: chr2_114739260_114740383
seq2: B6Ng01-184B08.g_65_1187 (reverse)

seq1  -AAAAAAAGTGTG-AGAG-ATGTTTATGAATTCTATAAAGAAACCCTTAA  47
       |||||| ||||| |||| ||||||||||| ||||||| |||||||||  
seq2  AAAAAAAGGTGTGTAGAGAATGTTTATGAA-TCTATAAGGAAACCCTT--  47

seq1  AATCGTA-TCTTTTAGTGGAAAGGAACTGTTTGCAGAGTGAAGCACAGGT  96
      ||||||| ||||||||| ||||||||||| |||||||||| |||||||  
seq2  AATCGTATTCTTTTAGT-GAAAGGAACTG-TTGCAGAGTGGAGCACAGTA  95

seq1  AACGGCCATAGTGCACTAAATGTCCTGATATCTTCC-TTACACTTGATTA  145
      | || |||||||||||| ||||| |||||||||||| |||||||||||||
seq2  ACCGCCCATAGTGCACT-AATGT-CTGATATCTTCCTTTACACTTGATTA  143

seq1  GAGGAGAAT-ATAACCCTAAGTTCAAGTGGCTAGCAAAACTTAATGTCAA  194
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  GAGGAGAATAATAACCCTAAGTTCAAGTTGCTAGCAAAACTTAATGTCAA  193

seq1  GATAACAAAAGATCCCAAGTAAGTCAAATAGTAATGAAGAATTAATACCC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACAAAAGATCCCAAGTAAGTCAAATAGTAATGAAGAATTAATACCC  243

seq1  ATGACATCATCCTTCTGGACTGTGTTTATATCAGCACTGGTCCTTTTCAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATCATCCTTCTGGACTGTGTTTATATCAGCACTGGTCCTTTTCAT  293

seq1  CCATGATGGCAAAGCATTCAAAAGAAAGGAGGTTCCTATTTTAGAATGGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGGCAAAGCATTCAAAAGAAAGGAGGTTCCTATTTTAGAATGGC  343

seq1  ATGGTTTCTTATTCAAAGCATGCACTGTAGTCTGGTTCCAGTTATGTTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTCTTATTCAAAGCATGCACTGTAGTCTGGTTCCAGTTATGTTTA  393

seq1  TGTGCCTGCTCATTATGAGAAAGGATTCAGCCTATGGTGAGCCTTGATGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCTCATTATGAGAAAGGATTCAGCCTATGGTGAGCCTTGATGG  443

seq1  TTTAAAATTCTCCTTAATCTATCTCATTTTCTTCATCCTGTGTTCCTGGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTCTCCTTAATCTATCTCATTTTCTTCATCCTGTGTTCCTGGG  493

seq1  TCATTAAGATTGATAAGAGAAAGTCATGAAGTAATCTGTTTGTGTTACCG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGATTGATAAGAGAAAGTCATGAAGTAATCTGTTTGTGTTACCG  543

seq1  GCCTAACTTCAGTAATATAATAAATGTGGGCAAAATAAATCATGTTGAGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAACTTCAGTAATATAATAAATGTGGGCAAAATAAATCATGTTGAGT  593

seq1  TAATGGATCCTAACTTTTCAACTGACATCTTTTCTAAGACCTTGTTCACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGATCCTAACTTTTCAACTGACATCTTTTCTAAGACCTTGTTCACT  643

seq1  CTCAGATTCACATCCAGAGGTGACTTCCAAATCTCCATTTTGTGGTCTCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATTCACATCCAGAGGTGACTTCCAAATCTCCATTTTGTGGTCTCA  693

seq1  CCTCTCACTTCCACTTCAGTCTTCAATTCAAAGCATCCTTGCGTGTTTTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCACTTCCACTTCAGTCTTCAATTCAAAGCATCCTTGCGTGTTTTC  743

seq1  TATGTTGGGGTCTTGCCCAACAGAGTTACCGTTTTTTTTTTTTCTGTTGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGGGGTCTTGCCCAACAGAGTTACCGTTTTTTTTTTTTCTGTTGC  793

seq1  ATTCTCCTTACAGGAAGAAAAACATTTTTCATTCTCATTAGTGGTTTTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTACAGGAAGAAAAACATTTTTCATTCTCATTAGTGGTTTTTC  843

seq1  TAGTGATTTGTTTATGTGGGTTTAATTACCTCCTCCAATTTGGTGTGTTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTTGTTTATGTGGGTTTAATTACCTCCTCCAATTTGGTGTGTTT  893

seq1  TTGTTTTGTATTGTTTTGTTTATTGTTGTGGTTTGTTTTTTTGTTTTGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTATTGTTTTGTTTATTGTTGTGGTTTGTTTTTTTGTTTTGTT  943

seq1  TTGTTTTGATAATGTGGGGTCATAGTCACCGAAGAATACAGTAAATAATA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGATAATGTGGGGTCATAGTCACCGAAGAATACAGTAAATAATA  993

seq1  AAGATCATCACACAATATAAGAAGAAAGAAAGAGGAAACTAAAACCCTGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATCACACAATATAAGAAGAAAGAAAGAGGAAACTAAAACCCTGT  1043

seq1  CTTATAACCCCAAATCTGTCACTCTAAGTTCTTCATGCGATCTGGACCTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAACCCCAAATCTGTCACTCTAAGTTCTTCATGCGATCTGGACCTC  1093

seq1  AGCTTCTCAGAAGCATAATGGGGGGAATTC  1124
      ||||||||||||||||||||||||||||||
seq2  AGCTTCTCAGAAGCATAATGGGGGGAATTC  1123