BAC Information

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BAC

Clone NameB6Ng01-184C09
Chromosome2 (Build37)
Map Location 61,842,611 - 61,843,552
singlet/doubletsinglet
Overlap genenone
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneSlc4a10, Dpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C09.bB6Ng01-184C09.g
ACCGA009595GA009596
length1,1031,184
definitionB6Ng01-184C09.b B6Ng01-184C09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagccagtgtggtttatatggcaagtaccagggtagatgtggc
tatataaggaaactttatctcaatatcaacaacaacaaaaatagcccctc
ctctcaaaaaaatccccaaaacatcaaaatcttctaaaacctatgggtag
ataggtcacagttcctagtgaagaacctactactattgttctgctaaatg
aacatactattaaatagcctcctaagtacttaaacctgtacaatagtgca
tttctcagtcagcatctaggaagcttatttgttgttgttttcaatagatg
gtgattaagacagagtggttaatgtgaagagaatatgggactgtggagga
atcagccctaaatgggacacctatagcatgacccctcctttcaagcctca
gcgatcatcataaaaagggggatggaaagaaagtggatgcacatagtgaa
acaatgctttctagatacaacagacatataccacttgcatatacaagatg
tgcacaagatgtacccgcataagatcaagccaatcaaaattccagcatga
gggggagaaggaagtatttgtaaactgtcatcctttgttgagtagctatt
ggaaagtgatgctagcaaagggagaataagttttctgtaaagctgtgacc
cttgagagttagggctaaggttcagtttagacaaaaggttagtgatagga
tgaaaaaacaaaacaaaacaaaaaacagtaacagcagcaacaacaacaaa
accaaacaaacagggtagcccctggtaagtctaccatgttctactgggtg
ggctcataacaagtcttaggcagtctctaatctattttctatctttagtg
atttgaacatgatgtatgttttgtgtaagagcatgacctctccatgttca
atgagttgtgtgggagacacctttcagcaatggggccttgctctgagttt
gtggagtgcaacacagaggggtctatagggatttccacacacagggagat
ccatgtgtcaccctagtctcttccactatacctcaacttactgggtttaa
tagaattgtagatggtttatcaatttatttaatgactaatggtcgagcct
gag
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctatgcaa
atggatggacctggagggcatcatcctgagtgatgtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatgtaagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagctaaagggatctgcaacccta
tagatgaacacattatgagctaaccagtaccccgagctctgactctagct
gcatatatatcaaagatgtctagtcgtcaatcacttgaagaagaggtcca
atgacctgccaacttatattgcccagtacggtaatgcagtccaaaagggg
atggctggccaggtggcagtgcggctgcacatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61842611_61843552
seq2: B6Ng01-184C09.b_197_1143

seq1  CACAGTTCCTAGTGAAGAACCTACTACTATTGTTCTGCTAAATGAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTCCTAGTGAAGAACCTACTACTATTGTTCTGCTAAATGAACATA  50

seq1  CTATTAAATAGCCTCCTAAGTACTTAAACCTGTACAATAGTGCATTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAATAGCCTCCTAAGTACTTAAACCTGTACAATAGTGCATTTCTC  100

seq1  AGTCAGCATCTAGGAAGCTTATTTGTTGTTGTTTTCAATAGATGGTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCATCTAGGAAGCTTATTTGTTGTTGTTTTCAATAGATGGTGATT  150

seq1  AAGACAGAGTGGTTAATGTGAAGAGAATATGGGACTGTGGAGGAATCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAGTGGTTAATGTGAAGAGAATATGGGACTGTGGAGGAATCAGC  200

seq1  CCTAAATGGGACACCTATAGCATGACCCCTCCTTTCAAGCCTCAGCGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGGGACACCTATAGCATGACCCCTCCTTTCAAGCCTCAGCGATC  250

seq1  ATCATAAAAAGGGGGATGGAAAGAAAGTGGATGCACATAGTGAAACAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAAAAGGGGGATGGAAAGAAAGTGGATGCACATAGTGAAACAATG  300

seq1  CTTTCTAGATACAACAGACATATACCACTTGCATATACAAGATGTGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAGATACAACAGACATATACCACTTGCATATACAAGATGTGCACA  350

seq1  AGATGTACCCGCATAAGATCAAGCCAATCAAAATTCCAGCATGAGGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTACCCGCATAAGATCAAGCCAATCAAAATTCCAGCATGAGGGGGA  400

seq1  GAAGGAAGTATTTGTAAACTGTCATCCTTTGTTGAGTAGCTATTGGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGTATTTGTAAACTGTCATCCTTTGTTGAGTAGCTATTGGAAAG  450

seq1  TGATGCTAGCAAAGGGAGAATAAGTTTTCTGTAAAGCTGTGACCCTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTAGCAAAGGGAGAATAAGTTTTCTGTAAAGCTGTGACCCTTGAG  500

seq1  AGTTAGGGCTAAGGTTCAGTTTAGACAAAAGGTTAGTGATAGGATGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGGCTAAGGTTCAGTTTAGACAAAAGGTTAGTGATAGGATGAAAA  550

seq1  AACAAAACAAAACAAAAAACAGTAACAGCAGCAACAACAACAAAACCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAACAAAAAACAGTAACAGCAGCAACAACAACAAAACCAAA  600

seq1  CAAACAGGGTAGCCCCTGGTAAGTCTACCATGTTCTACTGGGTGGGCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGGGTAGCCCCTGGTAAGTCTACCATGTTCTACTGGGTGGGCTCA  650

seq1  TAACAAGTCTTAGGCAGTCTCTAATCTATTTTCTATCTTTAGTGATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGTCTTAGGCAGTCTCTAATCTATTTTCTATCTTTAGTGATTTGA  700

seq1  ACATGATGTATGTTTTGTGTAAGAGCATGACCTCTCCATGTTCAATGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATGTATGTTTTGTGTAAGAGCATGACCTCTCCATGTTCAATGAGT  750

seq1  TGTGTGGGAGACACC-TTCAGCAATGGGGCCTTGCTCTGAGTTTGTGGAG  799
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGAGACACCTTTCAGCAATGGGGCCTTGCTCTGAGTTTGTGGAG  800

seq1  TGCAACACAGAGGGTTCTATAGGGATTTCCCACACACAGGGAGATCCATG  849
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  TGCAACACAGAGGGGTCTATAGGGATTT-CCACACACAGGGAGATCCATG  849

seq1  TGTCACCCTAGTCTCTTCCACTATACCTCAACTTACTGGGTTT-ATAG-A  897
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  TGTCACCCTAGTCTCTTCCACTATACCTCAACTTACTGGGTTTAATAGAA  899

seq1  TTGTAGATGGTTTATC-ATTTATTTAATGACTAAT-GTCGAG-CTGAG  942
      |||||||||||||||| |||||||||||||||||| |||||| |||||
seq2  TTGTAGATGGTTTATCAATTTATTTAATGACTAATGGTCGAGCCTGAG  947