BAC Information

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BAC

Clone NameB6Ng01-184D03
Chromosome2 (Build37)
Map Location 35,411,355 - 35,511,899
singlet/doubletdoublet
Overlap geneLOC100042194
Upstream geneMapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042
Downstream geneDab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184D03.bB6Ng01-184D03.g
ACCGA009631GA009632
length1,0921,141
definitionB6Ng01-184D03.b B6Ng01-184D03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,510,808 - 35,511,899)(35,411,355 - 35,412,464)
sequence
gaattccagatgcgtgatttcttcattcacccatttcaatcaattccaag
tgatgaggaggaggataaatgatgagttattgagcaagctcctgttttgc
caagttgctgtgtccgtgaaaatgcagagcgcaacgctcagcagggaggg
agccagcctaggaggctcaaggcctccgctaagagtccttgggggagtgt
gggcttcagtttcagagtgggaagtggaagctaggagagattaagatgct
tgctccaagtggctaggttgttatgcggcagagctaggacaaggagagtt
cggaatgtggggtgggcagagtggggccctcctttcttacagagacagct
catacacagctctacacgcaggattcacaagtgacttgaaggctcagagc
ttcttgaccagtcccatcctcccatgcactgtcctttagagaactgcaag
tgtgcatgccacaccaccctggaagctccttgtcaccaagggactccaac
ctgctatatctcctacagtgtgacgtactgggcccaggcctagtagacag
caagtattcagtcaagggcaacattctcctagcctcagcatccatctatc
cagtcatacaccttccacccaggccaaccttcgtcgccttctccccctcc
tgcagactagccactgaaaatgtgcaaatggcctggccgacctctgcctc
tctatctgttcaccctgggacactaagattgctcaggatgcaggcagaac
tccatggattcacactgggtggacccatgtcctacccatgccagttttaa
aagctcaaaccctaacaggaaagctttagggagcgaagctgttttcacag
acatctctctcaatgccatttctgggctctgtctgaatgccaagaacaca
tctaagcaagcaagacagataagtaggggaagatcccagacagatacagc
tacctctcggctccagagaggagagatgctgggcacacagcaagcaagca
gctggacaggcacctgggaatggcaaaagacttatttctaggtgcactag
tgagaatcaatatatccccatagtttacaaacaaagacactc
gaattccacataatgcactctgatcatttttttaaaaaaataagaactct
aatagcctaacttggccttgaactcattctgtagctgtgggaccttgaac
ttccaattctcctgcctctgtctcccaattgtaggcattaccaccacatc
tggttaacgtgctgctggggattgaatgtagagttttatgtacacacaca
catacacacacacacacacacacacacacacacacatacacacacacaca
cacacacacactcgtgttctacaagcatggagaggtcaaagtacaaattt
cagttgtttctttctgctgtgatttccgcaaatcaaactcaggctgtcgg
gcttaggtagcaagtgcttttaccaaaacactaagctagcatcttgttgc
cagcctgccccagtccagtttagattcccactaatgtggttaaggctggc
cttgaactcactaccctcctacctcagtctccccagtgtttgctgatctg
tagtgagtcctagagcccccaggatgccccaggaccggagagaactcacc
ttcttgctggggaaacatggtcccattccctatacttaactccccccagc
ccctgcagtatcccttccccaggcacccttaatgaggagatccagggagc
ctgctgcccacagtaggcttgggtagggcctggcctccctgtaattaagg
cagcaggaggctgggagccgggatcctgtcattcaaagtgtggaggaggg
gagaaggagcaggaggaacctccctgtggccaggctgaccacgtcagcag
ccactgggctctctgggagccgctaggtagcagctgggatagactgttat
ggatgcccgctaagctcagcatcacccctggtccaagcccagtgcaagcc
ctataccatgggacttagggcagaaaaaaactttgatctgagtccctgta
gaacgtatgtccccccatccctcctccctcttgatctctctacccaacct
ccacaggccattctttcaaaaaagcaggcccattgaacgggttcggatct
catcgtttcagcttaggcagaagggcccaaggtattcttctttctctcag
cagcagcacttgtgttggttgggggaaggttgggaaaggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_35510808_35511899
seq2: B6Ng01-184D03.b_44_1135 (reverse)

seq1  GAGTGTC-TTGTTTGTAA--CATGTGGGTATATTGA-TCTCACCTATGCA  46
      ||||||| ||||||||||   ||| || |||||||| ||||||   ||||
seq2  GAGTGTCTTTGTTTGTAAACTATGGGGATATATTGATTCTCACTAGTGCA  50

seq1  CCTAGGAAATAAGTCTTTTGCCA-TCCCA-GTGCCTGTCCCAGCCTGCCT  94
      |||| |||||||||||||||||| ||||| |||||||| |||| |||| |
seq2  CCTA-GAAATAAGTCTTTTGCCATTCCCAGGTGCCTGT-CCAG-CTGCTT  97

seq1  GCCTGCCTGTGTGCCCAGCATCTCTCCTCTCCTGGGGCCGAGAGGTAGCT  144
      || || |||||||||||||||||||||||| |||| ||||||||||||||
seq2  GCTTG-CTGTGTGCCCAGCATCTCTCCTCT-CTGGAGCCGAGAGGTAGCT  145

seq1  GTATCTGTCTGGGATCTTCCCCTACCTTATCTGTCTTGCTTGCTTAGATG  194
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTATCTGTCTGGGATCTTCCCCTA-CTTATCTGTCTTGCTTGCTTAGATG  194

seq1  TGTTCTTGGCATTCAGACAGAGCCCAGAAATGGCATTGAGAGAGATGTCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGGCATTCAGACAGAGCCCAGAAATGGCATTGAGAGAGATGTCT  244

seq1  GTGAAAACAGCTTCGCTCCCTAAAGCTTTCCTGTTAGGGTTTGAGCTTTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACAGCTTCGCTCCCTAAAGCTTTCCTGTTAGGGTTTGAGCTTTT  294

seq1  AAAACTGGCATGGGTAGGACATGGGTCCACCCAGTGTGAATCCATGGAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGCATGGGTAGGACATGGGTCCACCCAGTGTGAATCCATGGAGT  344

seq1  TCTGCCTGCATCCTGAGCAATCTTAGTGTCCCAGGGTGAACAGATAGAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCATCCTGAGCAATCTTAGTGTCCCAGGGTGAACAGATAGAGA  394

seq1  GGCAGAGGTCGGCCAGGCCATTTGCACATTTTCAGTGGCTAGTCTGCAGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGTCGGCCAGGCCATTTGCACATTTTCAGTGGCTAGTCTGCAGG  444

seq1  AGGGGGAGAAGGCGACGAAGGTTGGCCTGGGTGGAAGGTGTATGACTGGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGAAGGCGACGAAGGTTGGCCTGGGTGGAAGGTGTATGACTGGA  494

seq1  TAGATGGATGCTGAGGCTAGGAGAATGTTGCCCTTGACTGAATACTTGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGATGCTGAGGCTAGGAGAATGTTGCCCTTGACTGAATACTTGCT  544

seq1  GTCTACTAGGCCTGGGCCCAGTACGTCACACTGTAGGAGATATAGCAGGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTAGGCCTGGGCCCAGTACGTCACACTGTAGGAGATATAGCAGGT  594

seq1  TGGAGTCCCTTGGTGACAAGGAGCTTCCAGGGTGGTGTGGCATGCACACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCCCTTGGTGACAAGGAGCTTCCAGGGTGGTGTGGCATGCACACT  644

seq1  TGCAGTTCTCTAAAGGACAGTGCATGGGAGGATGGGACTGGTCAAGAAGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTCTCTAAAGGACAGTGCATGGGAGGATGGGACTGGTCAAGAAGC  694

seq1  TCTGAGCCTTCAAGTCACTTGTGAATCCTGCGTGTAGAGCTGTGTATGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCTTCAAGTCACTTGTGAATCCTGCGTGTAGAGCTGTGTATGAG  744

seq1  CTGTCTCTGTAAGAAAGGAGGGCCCCACTCTGCCCACCCCACATTCCGAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTAAGAAAGGAGGGCCCCACTCTGCCCACCCCACATTCCGAA  794

seq1  CTCTCCTTGTCCTAGCTCTGCCGCATAACAACCTAGCCACTTGGAGCAAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTGTCCTAGCTCTGCCGCATAACAACCTAGCCACTTGGAGCAAG  844

seq1  CATCTTAATCTCTCCTAGCTTCCACTTCCCACTCTGAAACTGAAGCCCAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAATCTCTCCTAGCTTCCACTTCCCACTCTGAAACTGAAGCCCAC  894

seq1  ACTCCCCCAAGGACTCTTAGCGGAGGCCTTGAGCCTCCTAGGCTGGCTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCAAGGACTCTTAGCGGAGGCCTTGAGCCTCCTAGGCTGGCTCC  944

seq1  CTCCCTGCTGAGCGTTGCGCTCTGCATTTTCACGGACACAGCAACTTGGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGCTGAGCGTTGCGCTCTGCATTTTCACGGACACAGCAACTTGGC  994

seq1  AAAACAGGAGCTTGCTCAATAACTCATCATTTATCCTCCTCCTCATCACT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGAGCTTGCTCAATAACTCATCATTTATCCTCCTCCTCATCACT  1044

seq1  TGGAATTGATTGAAATGGGTGAATGAAGAAATCACGCATCTGGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTGATTGAAATGGGTGAATGAAGAAATCACGCATCTGGAATTC  1092

seq1: chr2_35411355_35412464
seq2: B6Ng01-184D03.g_67_1207

seq1  GAATTCCACATAATGCACTCTGATCATTTTTTTAAAAAAATAAGAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATAATGCACTCTGATCATTTTTTTAAAAAAATAAGAACTCT  50

seq1  AATAGCCTAACTTGGCCTTGAACTCATTCTGTAGCTGTGGGACCTTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCTAACTTGGCCTTGAACTCATTCTGTAGCTGTGGGACCTTGAAC  100

seq1  TTCCAATTCTCCTGCCTCTGTCTCCCAATTGTAGGCATTACCACCACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTCTCCTGCCTCTGTCTCCCAATTGTAGGCATTACCACCACATC  150

seq1  TGGTTAACGTGCTGCTGGGGATTGAATGTAGAGTTTTATGTACACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAACGTGCTGCTGGGGATTGAATGTAGAGTTTTATGTACACACACA  200

seq1  CATACACACACACACACACACACACACACACACACATACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACACACACACACACACACACACACACACACATACACACACACACA  250

seq1  CACACACACACTCGTGTTCTACAAGCATGGAGAGGTCAAAGTACAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACTCGTGTTCTACAAGCATGGAGAGGTCAAAGTACAAATTT  300

seq1  CAGTTGTTTCTTTCTGCTGTGATTTCCGCAAATCAAACTCAGGCTGTCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTTTCTTTCTGCTGTGATTTCCGCAAATCAAACTCAGGCTGTCGG  350

seq1  GCTTAGGTAGCAAGTGCTTTTACCAAAACACTAAGCTAGCATCTTGTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTAGCAAGTGCTTTTACCAAAACACTAAGCTAGCATCTTGTTGC  400

seq1  CAGCCTGCCCCAGTCCAGTTTAGATTCCCACTAATGTGGTTAAGGCTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGCCCCAGTCCAGTTTAGATTCCCACTAATGTGGTTAAGGCTGGC  450

seq1  CTTGAACTCACTACCCTCCTACCTCAGTCTCCCCAGTGTTTGCTGATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACTCACTACCCTCCTACCTCAGTCTCCCCAGTGTTTGCTGATCTG  500

seq1  TAGTGAGTCCTAGAGCCCCCAGGATGCCCCAGGACCGGAGAGAACTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGTCCTAGAGCCCCCAGGATGCCCCAGGACCGGAGAGAACTCACC  550

seq1  TTCTTGCTGGGGAAACATGGTCCCATTCCCTATACTTAACTCCCCCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTGGGGAAACATGGTCCCATTCCCTATACTTAACTCCCCCCAGC  600

seq1  CCCTGCAGTATCCCTTCCCCAGGCACCCTTAATGAGGAGATCCAGGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGTATCCCTTCCCCAGGCACCCTTAATGAGGAGATCCAGGGAGC  650

seq1  CTGCTGCCCACAGTAGGCTTGGGTAGGGCCTGGCCTCCCTGTAATTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCCACAGTAGGCTTGGGTAGGGCCTGGCCTCCCTGTAATTAAGG  700

seq1  CAGCAGGAGGCTGGGAGCCGGGATCCTGTCATTCAAAGTGTGGAGGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGAGGCTGGGAGCCGGGATCCTGTCATTCAAAGTGTGGAGGAGGG  750

seq1  GAGAAGGAGCAGGAGGAACCTCCCTGTGGCCAGGCTGACCACGTCAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAGCAGGAGGAACCTCCCTGTGGCCAGGCTGACCACGTCAGCAG  800

seq1  CCACT-GGCTCTCTGGGAGCCGCTAGGTAGCAGCTGGGATAGACTG-TAT  848
      ||||| |||||||||||||||||||||||||||||||||||||||| |||
seq2  CCACTGGGCTCTCTGGGAGCCGCTAGGTAGCAGCTGGGATAGACTGTTAT  850

seq1  GGATG-CCGCT-AGCTCAGCATCA-CCCTGGTCCAAG-CCAGTGCAAGCC  894
      ||||| ||||| |||||||||||| |||||||||||| ||||||||||||
seq2  GGATGCCCGCTAAGCTCAGCATCACCCCTGGTCCAAGCCCAGTGCAAGCC  900

seq1  C-ATACCAT-GGACTTAGGGCAGAAAAAA--CTTGATCTGAGT-CCTGTA  939
      | ||||||| |||||||||||||||||||   ||||||||||| ||||||
seq2  CTATACCATGGGACTTAGGGCAGAAAAAAACTTTGATCTGAGTCCCTGTA  950

seq1  G-ACGTATGT-CCCCCATCCCTC--TCCTCTTGATCTCTCTACCCAA-CT  984
      | |||||||| ||||||||||||   ||||||||||||||||||||| ||
seq2  GAACGTATGTCCCCCCATCCCTCCTCCCTCTTGATCTCTCTACCCAACCT  1000

seq1  CCACA-GCCATTCCTCCAAAAAAGCAGG-CCAATGA--CGGCTCGGATCT  1030
      ||||| ||||||| | |||||||||||| ||| |||   || ||||||||
seq2  CCACAGGCCATTCTTTCAAAAAAGCAGGCCCATTGAACGGGTTCGGATCT  1050

seq1  CAGCG-TTCAGC-TAGGCAG-AGGGCCAAAGGTATCTCTTCT-----TCA  1072
      || || |||||| ||||||| |||||| ||||||| ||||||     |||
seq2  CATCGTTTCAGCTTAGGCAGAAGGGCCCAAGGTAT-TCTTCTTTCTCTCA  1099

seq1  GCAGGCAGCAC-TGTGT--GTTGGGG--AGGTTGGGAAAGGGC  1110
      ||| ||||||| |||||  |||||||  ||||||||||||| |
seq2  GCA-GCAGCACTTGTGTTGGTTGGGGGAAGGTTGGGAAAGGTC  1141