BAC Information

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BAC

Clone NameB6Ng01-184E22
Chromosome2 (Build37)
Map Location 141,090,083 - 141,226,669
singlet/doubletdoublet
Overlap genenone
Upstream geneSel1l2, 2900006F19Rik, Flrt3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184E22.bB6Ng01-184E22.g
ACCGA009717GA009718
length1,1311,130
definitionB6Ng01-184E22.b B6Ng01-184E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,225,540 - 141,226,669)(141,090,083 - 141,091,221)
sequence
tgctgtctgtggatgtccacagaagcataagatgagcctgggctctgaaa
ttttgagaaaagtgccctatggctgttgtctgtctgtctttttggaaaga
tctcatatagatatggtgctccgttctaggttagctctccagttctagtc
tcaagagcctgcttaccagaaccacagatagctgcagtctccagtctgga
tttcttctccttgctcctttacagagcctttgtggcatttccctttcctt
cgctattgcagcatgagttcatctgctccccgtacccccaactcaaagct
ctgcaccctaatgcaattaattgcctgatatggagcaacagtcattttac
agctgtaagtgtgatttggggcaaatcccaactgtacacctgtaaagctt
tgggttttctctacaaacacgacgatgtccttaccaagcctcaaaggaac
atctttctgactcaagtagctgttaaccttatttccgctcacattctacc
tgtctggttttgctgagggaaactccaggagtccccctctctgtctcttc
cagtgcagaaagttcactcttgaactgtactttccctttctttttctaga
ttctttctccaaacctacttatagttttcagctgtgattcaaatctcaca
ccagtaccaagttcctttctacttactatctgcttctctttgaagcgttt
gggtgtttgttgctatttttatagactcatctatctctgggacaaattct
cttgtccattaatatcattctctcctgcaaagaatatctttgcttacaga
ttcctgaggccaggacacagacaggtacacaaggagcacaatgacatgac
agaagttttcttcactttgttgtgaaccactgacctctttttctcctttt
taacctatcaatctgttgttccagttgcccttgttgggtgtctggcataa
ggacagacatgtacccaggttggaggcaagagagtctcaggcatgatgat
ctttaagaggatcctactagctctattggcctaggttaggcacttggaca
acaaacctagagttatctcttcgtgggccaatgcctcaataaagaatcca
caagtgtaggtaggtctgtcagtaaatttct

gaattcaattatgtaagtttggaattcaatatatatatatatatatatat
atatatatatatatatatatattgcttatatatatatcaccagtttccct
aagtgcttagctttgtttttgatagcttctgaaacactggttttcctacc
catttgttgaaattggaaatgcctttgtgtttgtataatactgagaggag
atgaaaagaaaacacacatttcatcaaattatttcctggcctgttcttga
attataatattgaatagtaagtaggacaggtaagacagtgtggagaaaga
accccctaacctgccaaggcccagttgcaggtggtgacagcacctctgag
cggctgaggctgctgggcattgctctaaggaagctggagactcggtctat
aatcagcagggagaggcacagctgctgggagtcatatgcaccataggccc
agaagcagcagaggttgtaagactgccagggcttacccatccctctactg
gaggacattgccaacaccaatcaagagttttaattgattctgcctttgag
ttttctctgatcatattttcacacgcactcttacctacagctcatgttcc
gtttaaactgaactgtatgaagtagtgttggcactaactggatctcttta
gattctattttagaagctggagttgcacacagtcattgattttcacagat
tactagtacacatgtatattaggcattatgtatccactctgccagcacac
agatgctataaaggctcatatgatttaaatgtgtttgcatatgcatgata
ttaaaaatggaggaagattgcttacaaataagagaaaatggtcggctttt
aattgtaaggggttcttggcatggctcagttaggcatcttctagagaaat
ctagatttttaaacacacaaataaaggaagggatgcagaaccccatcccc
ccacatcctttttagaagttcatctgcatgtcctgttgcttcagacatgg
gtagagaacaaagaacccagccagcacagcctgcttagtatacagttaaa
cccagcttgcatttcttaaccagtccggccagtcagtcttgtcccagcca
ggattactttattggctctgtacactccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141225540_141226669
seq2: B6Ng01-184E22.b_52_1182 (reverse)

seq1  AGAAAATTACTTACAGACTTACCTACAC-TGT-GAT--CTTATGGAGGCA  46
      ||||| ||||| |||||| ||||||||| ||| |||   |||| ||||||
seq2  AGAAATTTACTGACAGACCTACCTACACTTGTGGATTCTTTATTGAGGCA  50

seq1  TTTGCCCAATTGAGAGATAACTCTA-GTTTG-TGTCAAGTTGCCCTAAAA  94
      || |||| |   ||||||||||||| ||||| |||| |  ||||   || 
seq2  TTGGCCC-ACGAAGAGATAACTCTAGGTTTGTTGTCCAAGTGCC--TAAC  97

seq1  CTA-GCCAATAGAGCTAGTAGGATCCTCTTTAAAGAATCATCATGCCTGA  143
      ||| |||||||||||||||||||||||| |||||| ||||||||||||||
seq2  CTAGGCCAATAGAGCTAGTAGGATCCTC-TTAAAG-ATCATCATGCCTGA  145

seq1  GACCTCTTCTTGCCTCCAACCTGGGTACATGTCTGTCCTTATGCCAGACA  193
      || ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GA-CTC-TCTTGCCTCCAACCTGGGTACATGTCTGTCCTTATGCCAGACA  193

seq1  -CCAACAAGGGCAACTGGAACAACAGATTGATAGGTTAAAAAGGAGAAAA  242
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAAGGGCAACTGGAACAACAGATTGATAGGTTAAAAAGGAGAAAA  243

seq1  AGAGGTCAGTGGTTCACAACAAAGTGAAGAAAACTTCTGTCATGTCATTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCAGTGGTTCACAACAAAGTGAAGAAAACTTCTGTCATGTCATTG  293

seq1  TGCTCCTTGTGTACCTGTCTGTGTCCTGGCCTCAGGAATCTGTAAGCAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTGTGTACCTGTCTGTGTCCTGGCCTCAGGAATCTGTAAGCAAA  343

seq1  GATATTCTTTGCAGGAGAGAATGATATTAATGGACAAGAGAATTTGTCCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTTTGCAGGAGAGAATGATATTAATGGACAAGAGAATTTGTCCC  393

seq1  AGAGATAGATGAGTCTATAAAAATAGCAACAAACACCCAAACGCTTCAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGATGAGTCTATAAAAATAGCAACAAACACCCAAACGCTTCAAA  443

seq1  GAGAAGCAGATAGTAAGTAGAAAGGAACTTGGTACTGGTGTGAGATTTGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAGATAGTAAGTAGAAAGGAACTTGGTACTGGTGTGAGATTTGA  493

seq1  ATCACAGCTGAAAACTATAAGTAGGTTTGGAGAAAGAATCTAGAAAAAGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGCTGAAAACTATAAGTAGGTTTGGAGAAAGAATCTAGAAAAAGA  543

seq1  AAGGGAAAGTACAGTTCAAGAGTGAACTTTCTGCACTGGAAGAGACAGAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAGTACAGTTCAAGAGTGAACTTTCTGCACTGGAAGAGACAGAG  593

seq1  AGGGGGACTCCTGGAGTTTCCCTCAGCAAAACCAGACAGGTAGAATGTGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGACTCCTGGAGTTTCCCTCAGCAAAACCAGACAGGTAGAATGTGA  643

seq1  GCGGAAATAAGGTTAACAGCTACTTGAGTCAGAAAGATGTTCCTTTGAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAAATAAGGTTAACAGCTACTTGAGTCAGAAAGATGTTCCTTTGAGG  693

seq1  CTTGGTAAGGACATCGTCGTGTTTGTAGAGAAAACCCAAAGCTTTACAGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAGGACATCGTCGTGTTTGTAGAGAAAACCCAAAGCTTTACAGG  743

seq1  TGTACAGTTGGGATTTGCCCCAAATCACACTTACAGCTGTAAAATGACTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTTGGGATTTGCCCCAAATCACACTTACAGCTGTAAAATGACTG  793

seq1  TTGCTCCATATCAGGCAATTAATTGCATTAGGGTGCAGAGCTTTGAGTTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCATATCAGGCAATTAATTGCATTAGGGTGCAGAGCTTTGAGTTG  843

seq1  GGGGTACGGGGAGCAGATGAACTCATGCTGCAATAGCGAAGGAAAGGGAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTACGGGGAGCAGATGAACTCATGCTGCAATAGCGAAGGAAAGGGAA  893

seq1  ATGCCACAAAGGCTCTGTAAAGGAGCAAGGAGAAGAAATCCAGACTGGAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACAAAGGCTCTGTAAAGGAGCAAGGAGAAGAAATCCAGACTGGAG  943

seq1  ACTGCAGCTATCTGTGGTTCTGGTAAGCAGGCTCTTGAGACTAGAACTGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGCTATCTGTGGTTCTGGTAAGCAGGCTCTTGAGACTAGAACTGG  993

seq1  AGAGCTAACCTAGAACGGAGCACCATATCTATATGAGATCTTTCCAAAAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAACCTAGAACGGAGCACCATATCTATATGAGATCTTTCCAAAAA  1043

seq1  GACAGACAGACAACAGCCATAGGGCACTTTTCTCAAAATTTCAGAGCCCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGACAACAGCCATAGGGCACTTTTCTCAAAATTTCAGAGCCCA  1093

seq1  GGCTCATCTTATGCTTCTGTGGACATCCACAGACAGCA  1130
      ||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATCTTATGCTTCTGTGGACATCCACAGACAGCA  1131


seq1: chr2_141090083_141091221
seq2: B6Ng01-184E22.g_64_1193

seq1  GAATTCAATTATGTAAGTTTGGAATTCAATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTATGTAAGTTTGGAATTCAATATATATATATATATATATAT  50

seq1  ATATATATATATATATATATATTGCTTATATATATATCACCAGTTTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATTGCTTATATATATATCACCAGTTTCCCT  100

seq1  AAGTGCTTAGCTTTGTTTTTGATAGCTTCTGAAACACTGGTTTTCCTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTAGCTTTGTTTTTGATAGCTTCTGAAACACTGGTTTTCCTACC  150

seq1  CATTTGTTGAAATTGGAAATGCCTTTGTGTTTGTATAATACTGAGAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGAAATTGGAAATGCCTTTGTGTTTGTATAATACTGAGAGGAG  200

seq1  ATGAAAAGAAAACACACATTTCATCAAATTATTTCCTGGCCTGTTCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGAAAACACACATTTCATCAAATTATTTCCTGGCCTGTTCTTGA  250

seq1  ATTATAATATTGAATAGTAAGTAGGACAGGTAAGACAGTGTGGAGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATATTGAATAGTAAGTAGGACAGGTAAGACAGTGTGGAGAAAGA  300

seq1  ACCCCCTAACCTGCCAAGGCCCAGTTGCAGGTGGTGACAGCACCTCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTAACCTGCCAAGGCCCAGTTGCAGGTGGTGACAGCACCTCTGAG  350

seq1  CGGCTGAGGCTGCTGGGCATTGCTCTAAGGAAGCTGGAGACTCGGTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGAGGCTGCTGGGCATTGCTCTAAGGAAGCTGGAGACTCGGTCTAT  400

seq1  AATCAGCAGGGAGAGGCACAGCTGCTGGGAGTCATATGCACCATAGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCAGGGAGAGGCACAGCTGCTGGGAGTCATATGCACCATAGGCCC  450

seq1  AGAAGCAGCAGAGGTTGTAAGACTGCCAGGGCTTACCCATCCCTCTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGCAGAGGTTGTAAGACTGCCAGGGCTTACCCATCCCTCTACTG  500

seq1  GAGGACATTGCCAACACCAATCAAGAGTTTTAATTGATTCTGCCTTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACATTGCCAACACCAATCAAGAGTTTTAATTGATTCTGCCTTTGAG  550

seq1  TTTTCTCTGATCATATTTTCACACGCACTCTTACCTACAGCTCATGTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTGATCATATTTTCACACGCACTCTTACCTACAGCTCATGTTCC  600

seq1  GTTTAAACTGAACTGTATGAAGTAGTGTTGGCACTAACTGGATCTCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAACTGAACTGTATGAAGTAGTGTTGGCACTAACTGGATCTCTTTA  650

seq1  GATTCTATTTTAGAAGCTGGAGTTGCACACAGTCATTGATTTTCACAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTATTTTAGAAGCTGGAGTTGCACACAGTCATTGATTTTCACAGAT  700

seq1  TACTAGTACACATGTATATTAGGCATTATGTATCCACTCTGCCAGCACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTACACATGTATATTAGGCATTATGTATCCACTCTGCCAGCACAC  750

seq1  AGATGCTATAAAGGCTCATATGATTTAAATGTGTTTGCATATGCATGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTATAAAGGCTCATATGATTTAAATGTGTTTGCATATGCATGATA  800

seq1  TTAAAAATGGAGGAAGATTGCTTACAAATAAGAGAAAATGGTCGGCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGGAGGAAGATTGCTTACAAATAAGAGAAAATGGTCGGCTTTT  850

seq1  AATTGTAA-GGGTTCTTGGCATGGCTCAGTTAGGCATCTTCTAGAGAAAT  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAGGGGTTCTTGGCATGGCTCAGTTAGGCATCTTCTAGAGAAAT  900

seq1  CTAGATTTTTAAACACACAAATAAAAGGAAGGGATGCAGAACCCCAT-CC  948
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  CTAGATTTTTAAACACACAAAT-AAAGGAAGGGATGCAGAACCCCATCCC  949

seq1  CCCACATCCTTTTTAGAAGTTCATCTGCATGTCCTGTTTGCTTCAGACAT  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCACATCCTTTTTAGAAGTTCATCTGCATGTCCTG-TTGCTTCAGACAT  998

seq1  GGGTAAGAGAACAAAGAACCCAGCCAGCACAGCCTGCTTTAGTATAAACA  1048
      |||| |||||||||||||||||||||||||||||||| |||||||  |||
seq2  GGGT-AGAGAACAAAGAACCCAGCCAGCACAGCCTGC-TTAGTAT--ACA  1044

seq1  GGTAAACCAAGGCTTGCATTTCCTAAACAAGTCCCGGCAAGTCAGTCTTG  1098
      | |||||| | |||||||||| || ||| ||| ||||| |||||||||||
seq2  GTTAAACCCA-GCTTGCATTT-CTTAACCAGT-CCGGCCAGTCAGTCTTG  1091

seq1  TCCAAGCCAGGATTATCTTTATTTGGCTCTGTACCCTCCCT  1139
      ||| ||||||||||| ||||| |||||||||||| ||||||
seq2  TCCCAGCCAGGATTA-CTTTA-TTGGCTCTGTACACTCCCT  1130


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