BAC Information

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BAC

Clone NameB6Ng01-184G15
Chromosome2 (Build37)
Map Location 53,712,772 - 53,713,955
singlet/doubletsinglet
Overlap genenone
Upstream geneFmnl2, Prpf40a, Arl6ip6, LOC666872, LOC666876, LOC207933
Downstream geneRprm, LOC666913, LOC626563, LOC100041792, LOC100042878, Galnt13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184G15.bB6Ng01-184G15.g
ACCGA009799GA009800
length6191,159
definitionB6Ng01-184G15.b B6Ng01-184G15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcaatttacctggatatggccgctcagggttctaggaaaaat
ttgtttctagatatagggagctggcattttgagttgggattgtatgggga
tacttcgacaaagcagaatgggaagcaggatggttcacaggctctgcata
gtcccctggaaatggggttatggatcgacaataggccatagcaagtttcc
cactacagaactgcagatgtccagtcgggaattgaatttgaaagagagga
aggagagtgaagacctcgacttttcccaccagctttgctagtctatttga
ttctctggcagacttttgtggtaggtcctgagagaatgcttactggagtt
aggcacttaaataacataatgagtgtgtacaggggattggagggaaagac
ctgtgtaaatcactggagatgggcacagggacggaggtgaatctgctaaa
gagcagagaatgagaatgtggttttaattcggagaagtggagggagggag
aggtctaacttcccagttagactataagtttccctgactggcctggtttt
tgtgcttccagggaatccctgatggcattgagagatgggataatgggatg
agtatggagatagaagttt

gaattctaaatatcaaaagggtgagatttgattttaaatattctgtaaaa
ttaagagagaaatatataaactcaaacatacacaaacttatttaaccaac
aaatatagcatctgattgtctccagtagagaaaagtaaaggagaatgcat
tcttcctgtgccgggcaataaaaatcatcagtagtttaatataatcctac
cccaacatgagacctttatgagcaagaccattttaaccttcatatattgt
cttaagaaatagccaaatattttcccaccaaccatgaccctatactttca
aagctataattatcatgcctatggcagccacctgcattgccttctttttg
gtatggcactgtgaaaacaggtatcaattgcagtgatcatcaaagactat
tgcctggactccagtaaagctcagagtgcagcacaaacagttcctcctgt
gaaaagagtcattgaattaatttaattaacttaatgaattaatggaatta
atgagagtcataaagatgatcacagacagagaagcagcattcagcagcaa
attctttaagcaggcccttcctattactcttcctaaccaaatctctactt
tctttattatgttgttagttcctttttaaccaccaggactgcaattctgt
agctctaacttgcatttggaggcaaatttttaaaatgcatgctctaagaa
gtaggcattttatgcagcacattggagtttgggtattgaagtggaaattt
ccgttttttttttttgtttttttttttttttggagactcagttgtgtcat
gttcttctggaaactgtgttaggagaggctgtttttctgaagcagacaca
tgtgaggatgttttgctgagaagagacacatgttttttttctgggaagca
gcctggaaaaggggcatgtgatggttttgctagagtcaatgtttggaaag
ggtataaataataacccaacagacaaagatgatgctatgtggtatggtca
ccttgtcactcttgctgggcttgctaatgttggtctccactgacctggtg
tgtaatgattgcttgcactctggctggtcatggttgtcatgacttccaga
agatgaacaaaaactctggtggcttgagctctgtaaccttgcaactggct
aattgcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53712772_53713955
seq2: B6Ng01-184G15.g_66_1224 (reverse)

seq1  CCTGACAATTAGCCAGAGTCTGCAGATGTACCAAGAAGCTACCAAACACC  50
      |||| |||||||||||    |||| | ||  ||   ||||  |||   ||
seq2  CCTG-CAATTAGCCAG---TTGCA-AGGTTACA--GAGCT--CAA--GCC  39

seq1  ACCAGAAGTTTTTTTGGTTCATTTCTCTCTGTGAAGTCATGACAAACAAT  100
      ||||| |||||||   |||||| |   |||| ||||||||||| ||| ||
seq2  ACCAG-AGTTTTT---GTTCATCT---TCTG-GAAGTCATGAC-AACCAT  80

seq1  GACCAGCAAAGAGTGGCAAAGCAAACCATTACCACACAGTGTCAGTGAAG  150
      |||||||  ||||||   |||| || ||||| |||||   ||||||| ||
seq2  GACCAGC-CAGAGTG--CAAGC-AATCATTA-CACACCAGGTCAGTGGAG  125

seq1  ACCAACATTAGCAAAGCCCAGCAAAGAGTGACAAGGTGAACCAATACCAC  200
      |||||||||||| ||||||||| ||||||||||||||||  | |||||||
seq2  ACCAACATTAGC-AAGCCCAGC-AAGAGTGACAAGGTGA--CCATACCAC  171

seq1  ATAGCATCATTCTTTGTCTGTTGGGTTA-TATTTATACCCTTTCCAAACA  249
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  ATAGCATCA-TCTTTGTCTGTTGGGTTATTATTTATACCCTTTCCAAACA  220

seq1  TTGACTCTAGCAAAA-CATCACATGCCCCTTTTCCAGGCTGCTTCC---A  295
      ||||||||||||||| ||||||||||||||||||||||||||||||   |
seq2  TTGACTCTAGCAAAACCATCACATGCCCCTTTTCCAGGCTGCTTCCCAGA  270

seq1  GAAAAAACATGTGTCTCTTCTCAGCAAAACATCCTCACATGTGTCTGCTT  345
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACATGTGTCTCTTCTCAGCAAAACATCCTCACATGTGTCTGCTT  320

seq1  CAGAAAAACAGCCTCTCCTAACACAGTTTCCAGAAGAACATGACACAACT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAACAGCCTCTCCTAACACAGTTTCCAGAAGAACATGACACAACT  370

seq1  GAGTCTCCAAAAAAAAAAAAAAACAAAAAAAAAAAACGGAAATTTCCACT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCCAAAAAAAAAAAAAAACAAAAAAAAAAAACGGAAATTTCCACT  420

seq1  TCAATACCCAAACTCCAATGTGCTGCATAAAATGCCTACTTCTTAGAGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACCCAAACTCCAATGTGCTGCATAAAATGCCTACTTCTTAGAGCA  470

seq1  TGCATTTTAAAAATTTGCCTCCAAATGCAAGTTAGAGCTACAGAATTGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTAAAAATTTGCCTCCAAATGCAAGTTAGAGCTACAGAATTGCA  520

seq1  GTCCTGGTGGTTAAAAAGGAACTAACAACATAATAAAGAAAGTAGAGATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGTGGTTAAAAAGGAACTAACAACATAATAAAGAAAGTAGAGATT  570

seq1  TGGTTAGGAAGAGTAATAGGAAGGGCCTGCTTAAAGAATTTGCTGCTGAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGGAAGAGTAATAGGAAGGGCCTGCTTAAAGAATTTGCTGCTGAA  620

seq1  TGCTGCTTCTCTGTCTGTGATCATCTTTATGACTCTCATTAATTCCATTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTCTCTGTCTGTGATCATCTTTATGACTCTCATTAATTCCATTA  670

seq1  ATTCATTAAGTTAATTAAATTAATTCAATGACTCTTTTCACAGGAGGAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAAGTTAATTAAATTAATTCAATGACTCTTTTCACAGGAGGAAC  720

seq1  TGTTTGTGCTGCACTCTGAGCTTTACTGGAGTCCAGGCAATAGTCTTTGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGCTGCACTCTGAGCTTTACTGGAGTCCAGGCAATAGTCTTTGA  770

seq1  TGATCACTGCAATTGATACCTGTTTTCACAGTGCCATACCAAAAAGAAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACTGCAATTGATACCTGTTTTCACAGTGCCATACCAAAAAGAAGG  820

seq1  CAATGCAGGTGGCTGCCATAGGCATGATAATTATAGCTTTGAAAGTATAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAGGTGGCTGCCATAGGCATGATAATTATAGCTTTGAAAGTATAG  870

seq1  GGTCATGGTTGGTGGGAAAATATTTGGCTATTTCTTAAGACAATATATGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGTTGGTGGGAAAATATTTGGCTATTTCTTAAGACAATATATGA  920

seq1  AGGTTAAAATGGTCTTGCTCATAAAGGTCTCATGTTGGGGTAGGATTATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAATGGTCTTGCTCATAAAGGTCTCATGTTGGGGTAGGATTATA  970

seq1  TTAAACTACTGATGATTTTTATTGCCCGGCACAGGAAGAATGCATTCTCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTACTGATGATTTTTATTGCCCGGCACAGGAAGAATGCATTCTCC  1020

seq1  TTTACTTTTCTCTACTGGAGACAATCAGATGCTATATTTGTTGGTTAAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTTCTCTACTGGAGACAATCAGATGCTATATTTGTTGGTTAAAT  1070

seq1  AAGTTTGTGTATGTTTGAGTTTATATATTTCTCTCTTAATTTTACAGAAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTGTATGTTTGAGTTTATATATTTCTCTCTTAATTTTACAGAAT  1120

seq1  ATTTAAAATCAAATCTCACCCTTTTGATATTTAGAATTC  1184
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATCAAATCTCACCCTTTTGATATTTAGAATTC  1159


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