BAC Information

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BAC

Clone NameB6Ng01-184I07
Chromosome2 (Build37)
Map Location 159,489,299 - 159,676,848
singlet/doubletdoublet
Overlap geneLOC100043689
Upstream genePpp1r16b, 2310007D09Rik, Dhx35, LOC100043891
Downstream geneGm826, Mafb, LOC100043892, Top1, Plcg1, Zhx3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184I07.bB6Ng01-184I07.g
ACCGA009873GA009874
length1,093418
definitionB6Ng01-184I07.b B6Ng01-184I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,489,299 - 159,490,391)(159,676,423 - 159,676,848)
sequence
gaattctatgtactaagacccttgttgagtggtaaatggataccactcca
ctgttctattctagtcagtgtctgtattaacaaagtagacatccttgaag
tgttcattaagataatatagtttcactagcagagtcagagggcaagaaaa
ccatcagatgcacaggtaccctacccaggtggattcttggcctatacctg
tttgtctgtctaaacttctgaacattctaggatatgtctgtatgttcagg
atgtacacattcttggctcttgctctaggacccctgtagacttggagcat
ttccaggtttgtactgtgatctaaaggagaatggcaaacggggaaagctc
aagatggggccaaagaggtttcattcattaaccccacttccctgctccat
atcttgaatctttgggaaaaaaaatcagacaaacctgtttgcaattctgt
tagaagaagaatacaaaaaaaaaaaacacctgcaggtcaagggttggttt
gctatcctacaagatgtgtctgtgtgagctttctaagcaaaatccattgt
ccttcattctctccttttaatttcaggaagacttcaggatcatgaaaact
ttatctgtactctcctcttcacaatttgacatgaccccaagagttaaaag
tagtggtgatattgctgtcttttttaaaaaattaatgttggttgagtatt
taatatcttcaagaccatatgtagtccggaaataacattgtaagaaaaaa
tgggagccgggcggtggtagcgcacgcctttaatctgagcacttgggagg
cagaaggcaggcggatttctgagtttgaagccagcctggtctacaaagtg
agttccaggacagccagggttatacagagaaaccctgtctcaaaaaaaaa
aaaatgtaaaccgaatcttacctgtaaccattgtacaaggcaaaatgatg
atttgagtctaagcatttggaattcagagtttcacatgctatcctatgta
ttcctgagcgaccagtactcttgtattttggatctacttgtatctttaat
ttagtagtactgacctatgcattatatttaaggtgtttgttaa

actgagtatcaaagcctttacagggagggagaaggaataatcaactctgt
tcccttgaggacagaaaggtagataatgagagtgagccgacagatcccat
acctccctaggatctgtgggcaattactggctactaggaaagaagagata
gtttctcgagtgggatagccactagtggggagaacgtgttcctgtaaata
aaataattcatcacccaaggctctgtaaacaactgtagtaaaactcactg
gatcattaaaataaataagtagatagtaaataaataaataaataaataaa
taaataaataaataaatagtgtaggagggatgagggtcatcggggaaggg
aagggagcaggagataaatatgatatatatatatatatatatatatatat
atatatatatatataatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_159489299_159490391
seq2: B6Ng01-184I07.b_42_1134

seq1  GAATTCTATGTACTAAGACCCTTGTTGAGTGGTAAATGGATACCACTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTACTAAGACCCTTGTTGAGTGGTAAATGGATACCACTCCA  50

seq1  CTGTTCTATTCTAGTCAGTGTCTGTATTAACAAAGTAGACATCCTTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTATTCTAGTCAGTGTCTGTATTAACAAAGTAGACATCCTTGAAG  100

seq1  TGTTCATTAAGATAATATAGTTTCACTAGCAGAGTCAGAGGGCAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTAAGATAATATAGTTTCACTAGCAGAGTCAGAGGGCAAGAAAA  150

seq1  CCATCAGATGCACAGGTACCCTACCCAGGTGGATTCTTGGCCTATACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGATGCACAGGTACCCTACCCAGGTGGATTCTTGGCCTATACCTG  200

seq1  TTTGTCTGTCTAAACTTCTGAACATTCTAGGATATGTCTGTATGTTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTCTAAACTTCTGAACATTCTAGGATATGTCTGTATGTTCAGG  250

seq1  ATGTACACATTCTTGGCTCTTGCTCTAGGACCCCTGTAGACTTGGAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACACATTCTTGGCTCTTGCTCTAGGACCCCTGTAGACTTGGAGCAT  300

seq1  TTCCAGGTTTGTACTGTGATCTAAAGGAGAATGGCAAACGGGGAAAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGTTTGTACTGTGATCTAAAGGAGAATGGCAAACGGGGAAAGCTC  350

seq1  AAGATGGGGCCAAAGAGGTTTCATTCATTAACCCCACTTCCCTGCTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGGGCCAAAGAGGTTTCATTCATTAACCCCACTTCCCTGCTCCAT  400

seq1  ATCTTGAATCTTTGGGAAAAAAAATCAGACAAACCTGTTTGCAATTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAATCTTTGGGAAAAAAAATCAGACAAACCTGTTTGCAATTCTGT  450

seq1  TAGAAGAAGAATACAAAAAAAAAAAACACCTGCAGGTCAAGGGTTGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAGAATACAAAAAAAAAAAACACCTGCAGGTCAAGGGTTGGTTT  500

seq1  GCTATCCTACAAGATGTGTCTGTGTGAGCTTTCTAAGCAAAATCCATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTACAAGATGTGTCTGTGTGAGCTTTCTAAGCAAAATCCATTGT  550

seq1  CCTTCATTCTCTCCTTTTAATTTCAGGAAGACTTCAGGATCATGAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATTCTCTCCTTTTAATTTCAGGAAGACTTCAGGATCATGAAAACT  600

seq1  TTATCTGTACTCTCCTCTTCACAATTTGACATGACCCCAAGAGTTAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTACTCTCCTCTTCACAATTTGACATGACCCCAAGAGTTAAAAG  650

seq1  TAGTGGTGATATTGCTGTCTTTTTTAAAAAATTAATGTTGGTTGAGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTGATATTGCTGTCTTTTTTAAAAAATTAATGTTGGTTGAGTATT  700

seq1  TAATATCTTCAAGACCATATGTAGTCCGGAAATAACATTGTAAGAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTTCAAGACCATATGTAGTCCGGAAATAACATTGTAAGAAAAAA  750

seq1  TGGGAGCCGGGCGGTGGTAGCGCACGCCTTTAATCTGAGCACTTGGGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCCGGGCGGTGGTAGCGCACGCCTTTAATCTGAGCACTTGGGAGG  800

seq1  CAGAAGGCAGGCGGATTTCTGAGTTTGAAGCCAGCCTGGTCTACAAAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCAGGCGGATTTCTGAGTTTGAAGCCAGCCTGGTCTACAAAGTG  850

seq1  AGTTCCAGGACAGCCAGGGTTATACAGAGAAACCCTGTCTCAAAAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGGGTTATACAGAGAAACCCTGTCTCAAAAAAAAA  900

seq1  AAAATGTAAACCGAATCTTACCTGTAACCATTGTACAAGGCAAAATGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAAACCGAATCTTACCTGTAACCATTGTACAAGGCAAAATGATG  950

seq1  ATTTGAGTCTAAGCATTTGGAATTCAGAGTTTCACATGCTATTCCTATGT  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTTGAGTCTAAGCATTTGGAATTCAGAGTTTCACATGCTA-TCCTATGT  999

seq1  ATTCCTGAGCGACCAGTACTC-TGTATTTT-GATCTACTTGTATCTTTAA  1048
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  ATTCCTGAGCGACCAGTACTCTTGTATTTTGGATCTACTTGTATCTTTAA  1049

seq1  ATTTAAGTAGTACTGAACCTATGCA-TATA-TTAAAGTGTTTGTTAA  1093
        || |||||||||| ||||||||| |||| |||| |||||||||||
seq2  --TTTAGTAGTACTG-ACCTATGCATTATATTTAAGGTGTTTGTTAA  1093


seq1: chr2_159676423_159676848
seq2: B6Ng01-184I07.g_65_488 (reverse)

seq1  AATTATATATATATATATATATATATATATATATATATATATATATATCA  50
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT--TATATATATATATATATATATATATATATATATATATATATATCA  48

seq1  TATTTATCTCCTGCTCCCTTCCCTTCCCCGATGACCCTCATCCCTCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTCCTGCTCCCTTCCCTTCCCCGATGACCCTCATCCCTCCTAC  98

seq1  ACTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTATCT  148

seq1  ACTTATTTATTTTAATGATCCAGTGAGTTTTACTACAGTTGTTTACAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTATTTTAATGATCCAGTGAGTTTTACTACAGTTGTTTACAGAG  198

seq1  CCTTGGGTGATGAATTATTTTATTTACAGGAACACGTTCTCCCCACTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTGATGAATTATTTTATTTACAGGAACACGTTCTCCCCACTAGT  248

seq1  GGCTATCCCACTCGAGAAACTATCTCTTCTTTCCTAGTAGCCAGTAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCCCACTCGAGAAACTATCTCTTCTTTCCTAGTAGCCAGTAATTG  298

seq1  CCCACAGATCCTAGGGAGGTATGGGATCTGTCGGCTCACTCTCATTATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGATCCTAGGGAGGTATGGGATCTGTCGGCTCACTCTCATTATCT  348

seq1  ACCTTTCTGTCCTCAAGGGAACAGAGTTGATTATTCCTTCTCCCTCCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTGTCCTCAAGGGAACAGAGTTGATTATTCCTTCTCCCTCCCTG  398

seq1  TAAAGGCTTTGATACTCAGTGAATTC  426
      ||||||||||||||||||||||||||
seq2  TAAAGGCTTTGATACTCAGTGAATTC  424


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