BAC Information

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BAC

Clone NameB6Ng01-184I22
Chromosome2 (Build37)
Map Location 100,141,502 - 100,258,971
singlet/doubletdoublet
Overlap geneLOC100042907
Upstream geneLOC621386, LOC668702
Downstream geneLOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184I22.bB6Ng01-184I22.g
ACCGA009903GA009904
length1,0721,149
definitionB6Ng01-184I22.b B6Ng01-184I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,257,951 - 100,258,971)(100,141,502 - 100,142,652)
sequence
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaaa
cgcattctcacgaccggccaggaaagacgcaacaaaccagaatcttctgc
ggcaaaactttattgcttacatcttcaggagcaagagtgtaagaagcaag
agagagagaaaacgaaaccccgtcccttttttaggagagttatatttcgc
ctaggacgtgtcactccctgattggctgcagcccatcggccgagttgacg
tcacggggaaggcagagcacatggagtggagaaccaccctcggcatatgc
gcagattatttgtttaccacttagaacacagctgtcagcgccatcttgta
acggcgaatgtgggcgcggctcccaacattctgctccattttctgctcca
taaagatccccaagcttagagagaagagtgtgttaccatttaggccttag
cactacagaggtatttttatttgttgtaggtacggtacatttttactttt
tgagattataatataattataacagttcctccttcaaacactacatatag
ttctacttgttctttttaaaatttatgattcttctttttaatttttgtta
tatacatatattcataaaattaatatgcctagttatataatattattttt
atgtatgtttcctgggctggtaattcagtattggataaccagaattattt
tggctacccagggtattttatatgaattttaggatattttcaatttctat
gaacaatagatacagattttaatttagattttattgaatctgaaaataat
tttggtaaaatgctcattttcacaaattttaattctaccaatacatgagc
atgttcccatcgtcctattctctcatgtctttctctactgttatctttag
atattgaagattgtagtatagtggtactcaacttccctggctagtttatc
ataggatatttttatttccctt

gaattctatggaaaccatcagagttttctactcaaggtgcagagaaaaaa
aacataacaaaaaacatgacccttactcagttaaattgcagataatattt
aattgtgatttacctccactcaagatcatgaaacctcaatgcctgcattt
tgatatcctttctaacaatagaaacatcatatttaccagaatttatctca
aattcttagactactggaagggttctgggtaatataatgctttttttcaa
agcctttggtagaagtagaaagaagcaggcacattgaaacagagcttaaa
aatctaacatacccccaaataagtaaggtatttacacatgaactcattga
ttgaggtttgaaaggccgttacatagatctttacttgatattcacagtga
taatattaagatcattggtgctgaatgaaagaattgtagcaatatataca
agaagaaatcagtcttcaagaagaattatagcaatagaaagaggctgact
gataaagataaatgtatagttaatagaaaggcagcttgcattgtgtgctc
aaaaacctttgtataactatcttgatatatttctagaaactgaaatttta
ttaagttttcttgacaagaaaaagcaaatttcaaaaagtaagtttaaaag
tccctaaaactccagatgataacatgtatgtacaaggaacgcaaacacca
cattacaatcactacttttccttagttgaaattttctaacctattttact
tctttcctcgtgaacctgacaggttagttttaatggcatcttttatgtga
atacacatatctccctgtgtgtagatgtttgtttagatttcaaaataatg
acactataataattacacagtattgagcatgacaatatgaactgtacaaa
atccttgacagaaatacaactacaagtttgaatggattatcacattcatc
atcatttaaaacttttagagacttctacctgtttgggttgtgttttctgt
tttttctttaaggacttgtaactctttagcagtgttctctgtattttctt
ttagtgagttattaatcatccttcatgtcctctacaatacatcatgagat
atgcttttaattccaagtctaactttcaaggtgttaggtgccctggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100257951_100258971
seq2: B6Ng01-184I22.b_96_1118 (reverse)

seq1  AAGGGAA--TAAAATATCCTATGATAAACTTAACCAGGGAAGTTGAGTAC  48
      |||||||   ||||||||||||||||||| || |||||||||||||||||
seq2  AAGGGAAATAAAAATATCCTATGATAAAC-TAGCCAGGGAAGTTGAGTAC  49

seq1  CACTATACTACAATCTTCAAATATCTAAAGATAACAGTAGAGAAAGACAT  98
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CACTATACTACAATCTTC-AATATCTAAAGATAACAGTAGAGAAAGACAT  98

seq1  GAGAGAATAGGACGAT-GGAACATGCTCATGTATTGGTAGAATTAAAA-T  146
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  GAGAGAATAGGACGATGGGAACATGCTCATGTATTGGTAGAATTAAAATT  148

seq1  TGTGAAAATGAGCATTTTACCAAAATTATTTTCAGATTCAATAAAATCTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATGAGCATTTTACCAAAATTATTTTCAGATTCAATAAAATCTA  198

seq1  AATTAAAATCTGTATCTATTGTTCATAGAAATTGAAAATATCCTAAAATT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAATCTGTATCTATTGTTCATAGAAATTGAAAATATCCTAAAATT  248

seq1  CATATAAAATACCCTGGGTAGCCAAAATAATTCTGGTTATCCAATACTGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAATACCCTGGGTAGCCAAAATAATTCTGGTTATCCAATACTGA  298

seq1  ATTACCAGCCCAGGAAACATACATAAAAATAATATTATATAACTAGGCAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCAGCCCAGGAAACATACATAAAAATAATATTATATAACTAGGCAT  348

seq1  ATTAATTTTATGAATATATGTATATAACAAAAATTAAAAAGAAGAATCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTATGAATATATGTATATAACAAAAATTAAAAAGAAGAATCAT  398

seq1  AAATTTTAAAAAGAACAAGTAGAACTATATGTAGTGTTTGAAGGAGGAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAAAAGAACAAGTAGAACTATATGTAGTGTTTGAAGGAGGAAC  448

seq1  TGTTATAATTATATTATAATCTCAAAAAGTAAAAATGTACCGTACCTACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAATTATATTATAATCTCAAAAAGTAAAAATGTACCGTACCTACA  498

seq1  ACAAATAAAAATACCTCTGTAGTGCTAAGGCCTAAATGGTAACACACTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAAAATACCTCTGTAGTGCTAAGGCCTAAATGGTAACACACTCT  548

seq1  TCTCTCTAAGCTTGGGGATCTTTATGGAGCAGAAAATGGAGCAGAATGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTAAGCTTGGGGATCTTTATGGAGCAGAAAATGGAGCAGAATGTT  598

seq1  GGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTT  648

seq1  CTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGTGGTTCTCCACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGTAAACAAATAATCTGCGCATATGCCGAGGGTGGTTCTCCACT  698

seq1  CCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGCTGCAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGCTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGCTGCAGC  748

seq1  CAATCAGGGAGTGACACGTCCTAGGCGAAATATAACTCTCCTAAAAAAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGGGAGTGACACGTCCTAGGCGAAATATAACTCTCCTAAAAAAGG  798

seq1  GACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTACACTCTTGCTCCTGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTACACTCTTGCTCCTGA  848

seq1  AGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCT  898

seq1  TTCCTGGCCGGTCGTGAGAATGCGTTTAATAACAATTGGTGCCGAATTCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCCGGTCGTGAGAATGCGTTTAATAACAATTGGTGCCGAATTCC  948

seq1  GGGACGAGAAAAAACTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGAGAAAAAACTCGGGACTGGCGCAAGGAAGATCCCTCATTCCAGA  998

seq1  ACCAGAACTGCGGGTCGCGGTAATA  1021
      |||||||||||||||||||||||||
seq2  ACCAGAACTGCGGGTCGCGGTAATA  1023


seq1: chr2_100141502_100142652
seq2: B6Ng01-184I22.g_64_1212

seq1  GAATTCTATGGAAACCATCAGAGTTTTCTACTCAAGGTGCAGAGAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGAAACCATCAGAGTTTTCTACTCAAGGTGCAGAGAAAAAA  50

seq1  AACATAACAAAAAACATGACCCTTACTCAGTTAAATTGCAGATAATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAACAAAAAACATGACCCTTACTCAGTTAAATTGCAGATAATATTT  100

seq1  AATTGTGATTTACCTCCACTCAAGATCATGAAACCTCAATGCCTGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGATTTACCTCCACTCAAGATCATGAAACCTCAATGCCTGCATTT  150

seq1  TGATATCCTTTCTAACAATAGAAACATCATATTTACCAGAATTTATCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCCTTTCTAACAATAGAAACATCATATTTACCAGAATTTATCTCA  200

seq1  AATTCTTAGACTACTGGAAGGGTTCTGGGTAATATAATGCTTTTTTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAGACTACTGGAAGGGTTCTGGGTAATATAATGCTTTTTTTCAA  250

seq1  AGCCTTTGGTAGAAGTAGAAAGAAGCAGGCACATTGAAACAGAGCTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGGTAGAAGTAGAAAGAAGCAGGCACATTGAAACAGAGCTTAAA  300

seq1  AATCTAACATACCCCCAAATAAGTAAGGTATTTACACATGAACTCATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAACATACCCCCAAATAAGTAAGGTATTTACACATGAACTCATTGA  350

seq1  TTGAGGTTTGAAAGGCCGTTACATAGATCTTTACTTGATATTCACAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTTGAAAGGCCGTTACATAGATCTTTACTTGATATTCACAGTGA  400

seq1  TAATATTAAGATCATTGGTGCTGAATGAAAGAATTGTAGCAATATATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAAGATCATTGGTGCTGAATGAAAGAATTGTAGCAATATATACA  450

seq1  AGAAGAAATCAGTCTTCAAGAAGAATTATAGCAATAGAAAGAGGCTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATCAGTCTTCAAGAAGAATTATAGCAATAGAAAGAGGCTGACT  500

seq1  GATAAAGATAAATGTATAGTTAATAGAAAGGCAGCTTGCATTGTGTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGATAAATGTATAGTTAATAGAAAGGCAGCTTGCATTGTGTGCTC  550

seq1  AAAAACCTTTGTATAACTATCTTGATATATTTCTAGAAACTGAAATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTTTGTATAACTATCTTGATATATTTCTAGAAACTGAAATTTTA  600

seq1  TTAAGTTTTCTTGACAAGAAAAAGCAAATTTCAAAAAGTAAGTTTAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTTCTTGACAAGAAAAAGCAAATTTCAAAAAGTAAGTTTAAAAG  650

seq1  TCCCTAAAACTCCAGATGATAACATGTATGTACAAGGAACGCAAACACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAAACTCCAGATGATAACATGTATGTACAAGGAACGCAAACACCA  700

seq1  CATTACAATCACTACTTTTCCTTAGTTGAAATTTTCTAACCTATTTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAATCACTACTTTTCCTTAGTTGAAATTTTCTAACCTATTTTACT  750

seq1  TCTTTCCTCGTGAACCTGACAGGTTAGTTTTAATGGCATCTTTTATGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCGTGAACCTGACAGGTTAGTTTTAATGGCATCTTTTATGTGA  800

seq1  ATACACATATCTCCCTGTGTGTAGATGTTTGTTTAGATTTCAAAATAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATATCTCCCTGTGTGTAGATGTTTGTTTAGATTTCAAAATAATG  850

seq1  ACACTATAATAATTACACAGTATTGAGCATGACAATATGAACTGTACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATAATAATTACACAGTATTGAGCATGACAATATGAACTGTACAAA  900

seq1  ATCCTTGACAGAAATACAACTACAAGTTTGAATGGATTATCACATTCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGACAGAAATACAACTACAAGTTTGAATGGATTATCACATTCATC  950

seq1  ATCA-TTAAAACTTTTAGAGACTTCTACCTGTTT-GGTTGTGTTTTCCTG  998
      |||| ||||||||||||||||||||||||||||| ||||||||||||   
seq2  ATCATTTAAAACTTTTAGAGACTTCTACCTGTTTGGGTTGTGTTTTCTGT  1000

seq1  TTTTTCTTTAAGGACTTGTAACTCTTTAGCAGTGTTCTCCTGTA-TTTCT  1047
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  TTTTTCTTTAAGGACTTGTAACTCTTTAGCAGTGTTCT-CTGTATTTTCT  1049

seq1  TTAAGTGAGTTATTAAATTCCTTCTTCATGTCCTCTACCAT-CATCATGA  1096
      || |||||||||||||  || | ||||||||||||||| || ||||||||
seq2  TTTAGTGAGTTATTAA--TCATCCTTCATGTCCTCTACAATACATCATGA  1097

seq1  GATATGCTTTTAAATCCAGGTCTAACTTTTCAGGTGTGTTAGGGTGCCCT  1146
      ||||||||||||| |||| ||||||||||  ||  |||||| ||||||||
seq2  GATATGCTTTTAATTCCAAGTCTAACTTTCAAG--GTGTTA-GGTGCCCT  1144

seq1  GGACT  1151
      |||||
seq2  GGACT  1149


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