BAC Information

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BAC

Clone NameB6Ng01-184K10
Chromosome2 (Build37)
Map Location 134,692,089 - 134,811,312
singlet/doubletdoublet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184K10.bB6Ng01-184K10.g
ACCGA009973GA009974
length2881,188
definitionB6Ng01-184K10.b B6Ng01-184K10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,692,089 - 134,692,376)(134,810,118 - 134,811,312)
sequence
agtaataaccaacacttagatatctgtgacatagcttggccatttgttct
taatgtacatatttaaaagcaaaagatctactaatgtaccattcaaaata
tctttcaagttctacgcaagcctgccacatttttcagattaaggaatgga
ccacctttcgtcattgttcagccttattaaaatagaccactcttgatttg
gattgggtttgtcctgcctggtttggaattttacacacttgaaattataa
atggtatattattgggttttttttggggggtggggtgg

gaattcctggctttgtaatttatagagagaggagggtagagatcaattct
cagagaggaccaagtagggacagatgaatacaggtgggactgatgagcat
aaaacactcatacagcaaatatgaatatatatcagtccacatctattaaa
tgaccatttcccaagggtagggtaaaatctgtccataccccattgtatac
ttaacgaagtctgagagtaacactctctaccaaagcttttcctctcagtc
gaacaaatggactgaaacattgcttgcttgtttatacacaaaacccaaag
taagttctcaaagaactcagtaggcatcattacttttatattggagataa
tgaatattgttctgttctgccagaggtttcattcctcaagttgtggagtg
atagttaatgccagataccctagggattcattctgatagcacagagctaa
gaagcctctctcactggtgtgtaaaattgtgtgttcaggaaaagtatcaa
gggcaccatgcggtgggtaatgtggcatggggaagacccaggtggaagtg
ctgttcatgggcacgttcagctggaaagggatggttaaaatagcatcctc
cacatccattcacacaaaacaccattactctggggttttcttggcatctt
tttctctcctccgtgatgaagaaaatgcagaacccaaggcacagtacagc
agagatgtcactcgtgtcactgaaacttcttctgggcgaattttcctgag
ttaatagcgttaatgacccagtccattataaagcaccgtgtggtccctct
cttagctcatttgacagttggtgccttctagctttgaggaacttgctgaa
tgcaaattggaccgcctattaaatggtgacaacactgcatatacagtggc
tctaagaatgtaacctgcattagagtaacttggaaggcttaaggacattc
ggcctgagaatttgatattctaataaatttctactggtgctgatggtcaa
ggaccagcacttgagatatgctataaagaaaaacttacaggatgataata
aagctctataacagttataaatttgatgagactctctaacacatttttct
cataggggagctgtcatatacttactgatataaaaacctgtgactatatg
agttatctagaattgaattgtgctctacctaaggaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134692089_134692376
seq2: B6Ng01-184K10.b_51_338

seq1  AGTAATAACCAACACTTAGATATCTGTGACATAGCTTGGCCATTTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAACCAACACTTAGATATCTGTGACATAGCTTGGCCATTTGTTCT  50

seq1  TAATGTACATATTTAAAAGCAAAAGATCTACTAATGTACCATTCAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTACATATTTAAAAGCAAAAGATCTACTAATGTACCATTCAAAATA  100

seq1  TCTTTCAAGTTCTACGCAAGCCTGCCACATTTTTCAGATTAAGGAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAAGTTCTACGCAAGCCTGCCACATTTTTCAGATTAAGGAATGGA  150

seq1  CCACCTTTCGTCATTGTTCAGCCTTATTAAAATAGACCACTCTTGATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTTCGTCATTGTTCAGCCTTATTAAAATAGACCACTCTTGATTTG  200

seq1  GATTGGGTTTGTCCTGCCTGGTTTGGAATTTTACACACTTGAAATTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGTTTGTCCTGCCTGGTTTGGAATTTTACACACTTGAAATTATAA  250

seq1  ATGGTATATTATTGGGTTTTTTTTGGGGGGTGGGGTGG  288
      ||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATATTATTGGGTTTTTTTTGGGGGGTGGGGTGG  288


seq1: chr2_134810118_134811312
seq2: B6Ng01-184K10.g_66_1253 (reverse)

seq1  TTTTCCTTAGTTAGAGCA-AATCAAATTCTAGATTACTCATTATTAGTCA  49
      |||||||||| ||||||| |||  |||||||||| ||||||   ||||||
seq2  TTTTCCTTAGGTAGAGCACAATTCAATTCTAGATAACTCAT--ATAGTCA  48

seq1  CAG--TTTTATATCCAGTAAGTATTATTGACAGCT-CCCTAT-AGAAAAA  95
      |||  |||||||| ||||||||||   |||||||| |||||| |||||||
seq2  CAGGTTTTTATAT-CAGTAAGTAT--ATGACAGCTCCCCTATGAGAAAAA  95

seq1  TGTGTTAGAGAGTCTTCATACAATTTATAACTGTTATAGAGCCTTTATTT  145
      |||||||||||||| ||||  |||||||||||||||||||| ||||| ||
seq2  TGTGTTAGAGAGTC-TCATCAAATTTATAACTGTTATAGAG-CTTTA-TT  142

seq1  ATCATCCTGTAAGTTTTTCTTTATTAGCATATCTCAAAGTGCTGGTCCTT  195
      ||||||||||||||||||||||| ||||||||||| |||||||||||| |
seq2  ATCATCCTGTAAGTTTTTCTTTA-TAGCATATCTC-AAGTGCTGGTCC-T  189

seq1  TGACCATCAGCACCAGTTAGAAATTTATTAG-ATATCAAATTCTCAGGCC  244
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  TGACCATCAGCACCAG-TAGAAATTTATTAGAATATCAAATTCTCAGGCC  238

seq1  GAATGTCCTTAAGCCTTCCAAGTTACTCTAATGCAGGTTACATTCTTAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCCTTAAGCCTTCCAAGTTACTCTAATGCAGGTTACATTCTTAGA  288

seq1  GCCACTGGTATATGCAGTGTTGTCACCATTTAATAGGCGGTCCAATTTGC  344
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACT-GTATATGCAGTGTTGTCACCATTTAATAGGCGGTCCAATTTGC  337

seq1  ATTCAGCAAGTTCCTCAAAGCTAGAAGGCACCAACTGTCAAATGAGCTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCAAGTTCCTCAAAGCTAGAAGGCACCAACTGTCAAATGAGCTAA  387

seq1  GAGAGGGACCACACGGTGCTTTATAATGGACTGGGTCATTAACGCTATTA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGACCACACGGTGCTTTATAATGGACTGGGTCATTAACGCTATTA  437

seq1  ACTCAGGAAAATTCGCCCAGAAGAAGTTTCAGTGACACGAGTGACATCTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGAAAATTCGCCCAGAAGAAGTTTCAGTGACACGAGTGACATCTC  487

seq1  TGCTGTACTGTGCCTTGGGTTCTGCATTTTCTTCATCACGGAGGAGAGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTACTGTGCCTTGGGTTCTGCATTTTCTTCATCACGGAGGAGAGAA  537

seq1  AAAGATGCCAAGAAAACCCCAGAGTAATGGTGTTTTGTGTGAATGGATGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCCAAGAAAACCCCAGAGTAATGGTGTTTTGTGTGAATGGATGT  587

seq1  GGAGGATGCTATTTTAACCATCCCTTTCCAGCTGAACGTGCCCATGAACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGCTATTTTAACCATCCCTTTCCAGCTGAACGTGCCCATGAACA  637

seq1  GCACTTCCACCTGGGTCTTCCCCATGCCACATTACCCACCGCATGGTGCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCCACCTGGGTCTTCCCCATGCCACATTACCCACCGCATGGTGCC  687

seq1  CTTGATACTTTTCCTGAACACACAATTTTACACACCAGTGAGAGAGGCTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATACTTTTCCTGAACACACAATTTTACACACCAGTGAGAGAGGCTT  737

seq1  CTTAGCTCTGTGCTATCAGAATGAATCCCTAGGGTATCTGGCATTAACTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTCTGTGCTATCAGAATGAATCCCTAGGGTATCTGGCATTAACTA  787

seq1  TCACTCCACAACTTGAGGAATGAAACCTCTGGCAGAACAGAACAATATTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCACAACTTGAGGAATGAAACCTCTGGCAGAACAGAACAATATTC  837

seq1  ATTATCTCCAATATAAAAGTAATGATGCCTACTGAGTTCTTTGAGAACTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCCAATATAAAAGTAATGATGCCTACTGAGTTCTTTGAGAACTT  887

seq1  ACTTTGGGTTTTGTGTATAAACAAGCAAGCAATGTTTCAGTCCATTTGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGTTTTGTGTATAAACAAGCAAGCAATGTTTCAGTCCATTTGTT  937

seq1  CGACTGAGAGGAAAAGCTTTGGTAGAGAGTGTTACTCTCAGACTTCGTTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGAGAGGAAAAGCTTTGGTAGAGAGTGTTACTCTCAGACTTCGTTA  987

seq1  AGTATACAATGGGGTATGGACAGATTTTACCCTACCCTTGGGAAATGGTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACAATGGGGTATGGACAGATTTTACCCTACCCTTGGGAAATGGTC  1037

seq1  ATTTAATAGATGTGGACTGATATATATTCATATTTGCTGTATGAGTGTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAGATGTGGACTGATATATATTCATATTTGCTGTATGAGTGTTT  1087

seq1  TATGCTCATCAGTCCCACCTGTATTCATCTGTCCCTACTTGGTCCTCTCT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCATCAGTCCCACCTGTATTCATCTGTCCCTACTTGGTCCTCTCT  1137

seq1  GAGAATTGATCTCTACCCTCCTCTCTCTATAAATTACAAAGCCAGGAATT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGATCTCTACCCTCCTCTCTCTATAAATTACAAAGCCAGGAATT  1187

seq1  C  1195
      |
seq2  C  1188


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