BAC Information

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BAC

Clone NameB6Ng01-184L10
Chromosome2 (Build37)
Map Location 6,731,901 - 6,732,551
singlet/doubletsinglet
Overlap geneCugbp2
Upstream geneCdc123, Nudt5, Sec61a2, Dhtkd1, Upf2, LOC100040343, 5430407P10Rik, LOC634939, Echdc3, 1700014B07Rik, Usp6nl, LOC100040387, LOC100040659
Downstream geneLOC100040648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184L10.bB6Ng01-184L10.g
ACCGA010021GA010022
length216651
definitionB6Ng01-184L10.b B6Ng01-184L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctagtgagcgtatgttgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtctgtgtgtgtggcgtattcatggtgcagtac
atctttgtggatgatggagatcaacatcaggtgtcttcattgaccactct
ccatcctactttttggctgggtcccaggctgaacctgtagctcacagtca
gctaaactatctgtcc

atgcaagcctcatctggctcctcaggtgaatcagactcctaatttcagga
cttttgcactcgctgttttccctacctgctacggagtgggtgtggcatct
acctttatatactcacacagtgctgcctcgaaaattctttgcataccaga
gattcaaagagataaaggaacacaggacagtagatggctaagcaatgcca
agacaggataagctagtccttcataattcctgcttcacttaaggtctgtc
agatgtttggggaagaaaggctgaagatagatgctctaacattataagaa
atataggggttgtccaggtagtcagctatctctgtcatttctatgatttt
tggaagctatgtccctgtgcttcctgcattctcaaacaatatttattctt
tctcaaatctctgatggcattaaagactagatagttatattctcaaatta
aacttaagttgtttagtattaaagaaggtattgtaggttttagaatgata
acacaagttaaaatcaaagatgacttagacacagaattgtaaactcatta
aactagtatagataatactttaaataaattgccaaatataacaggctgga
tgttataaatgtatatcataccttataattttcataattgttataattca
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_6731901_6732551
seq2: B6Ng01-184L10.g_80_730

seq1  ATGCAAGCCTCATCTGGCTCCTCAGGTGAATCAGACTCCTAATTTCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGCCTCATCTGGCTCCTCAGGTGAATCAGACTCCTAATTTCAGGA  50

seq1  CTTTTGCACTCGCTGTTTTCCCTACCTGCTACGGAGTGGGTGTGGCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCACTCGCTGTTTTCCCTACCTGCTACGGAGTGGGTGTGGCATCT  100

seq1  ACCTTTATATACTCACACAGTGCTGCCTCGAAAATTCTTTGCATACCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATATACTCACACAGTGCTGCCTCGAAAATTCTTTGCATACCAGA  150

seq1  GATTCAAAGAGATAAAGGAACACAGGACAGTAGATGGCTAAGCAATGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGAGATAAAGGAACACAGGACAGTAGATGGCTAAGCAATGCCA  200

seq1  AGACAGGATAAGCTAGTCCTTCATAATTCCTGCTTCACTTAAGGTCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGATAAGCTAGTCCTTCATAATTCCTGCTTCACTTAAGGTCTGTC  250

seq1  AGATGTTTGGGGAAGAAAGGCTGAAGATAGATGCTCTAACATTATAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTTGGGGAAGAAAGGCTGAAGATAGATGCTCTAACATTATAAGAA  300

seq1  ATATAGGGGTTGTCCAGGTAGTCAGCTATCTCTGTCATTTCTATGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGGGTTGTCCAGGTAGTCAGCTATCTCTGTCATTTCTATGATTTT  350

seq1  TGGAAGCTATGTCCCTGTGCTTCCTGCATTCTCAAACAATATTTATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTATGTCCCTGTGCTTCCTGCATTCTCAAACAATATTTATTCTT  400

seq1  TCTCAAATCTCTGATGGCATTAAAGACTAGATAGTTATATTCTCAAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATCTCTGATGGCATTAAAGACTAGATAGTTATATTCTCAAATTA  450

seq1  AACTTAAGTTGTTTAGTATTAAAGAAGGTATTGTAGGTTTTAGAATGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGTTGTTTAGTATTAAAGAAGGTATTGTAGGTTTTAGAATGATA  500

seq1  ACACAAGTTAAAATCAAAGATGACTTAGACACAGAATTGTAAACTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTTAAAATCAAAGATGACTTAGACACAGAATTGTAAACTCATTA  550

seq1  AACTAGTATAGATAATACTTTAAATAAATTGCCAAATATAACAGGCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTATAGATAATACTTTAAATAAATTGCCAAATATAACAGGCTGGA  600

seq1  TGTTATAAATGTATATCATACCTTATAATTTTCATAATTGTTATAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAATGTATATCATACCTTATAATTTTCATAATTGTTATAATTCA  650

seq1  A  651
      |
seq2  A  651


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