BAC Information

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BAC

Clone NameB6Ng01-185E19
Chromosome2 (Build37)
Map Location 35,888,537 - 36,046,859
singlet/doubletdoublet
Overlap geneNdufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf
Upstream geneHc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194, Dab2ip, Ttll11
Downstream geneLOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50, Rpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185E19.bB6Ng01-185E19.g
ACCGA010451GA010452
length6361,101
definitionB6Ng01-185E19.b B6Ng01-185E19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,046,226 - 36,046,859)(35,888,537 - 35,889,645)
sequence
gaattcccactggctacttctcaccaggttccagcagtgtgggcagaggc
agcagcaggcttattagccagcccaggcacacacctcacacctagaacgg
gaacagaccttcctgcttgaggcactggcagggcaactcagttcagtgta
gcctttgtgttctagcacacaatagggcacccgataaacagctggtgccc
actaggtcctgaaagacagcgggtggcagtggcttcttcagattagagga
tctgtcagtgctaggaacatggccacccaaggtgcttcagagcagattcc
cacttcccagtacccccccaccccccgcccccgcctcccaaccccctgaa
tcttgctcatctgtactcttcagaacatgctttataaaaagccagtaaac
ctacctcccaagccccgagtagcatcctggctaattaaccggatcaaagg
agggggctgggaactaggtttgtgtggtccagacttgcgattgctgtcag
aaatagggcattttccagggtgcagtgccaaaccccagactctataggta
tttatgtctcagaactgactcagtatgggacacctggctggtatgcactg
gagaaccgctttggggtgtgtgtggtggtgggtggg
gaattccagagctcttgccctcagttatcatgctatccactgtgtcacgg
gaacaatggggcaggatgtaggaagacgatgcttcctggggaagacagca
ctagtgtctgccttgagagatggctcagggttcaagaggcagaggaggag
gaaggatggtttcctggcgagatagcagccagatagacttaaacgctaga
aagcatctaggcatccatcggcacaggccggtgatcccagttacctgaga
agctgagacaggaagatcaccaagttcaacaccagcctgagcaagttagt
cgagataatgtctcaaacatggaaggtaaaactgggactggagatgtaac
ttagctggagggcttaactagcatgcaggaagccctgggtttaactccca
gcacgggaggaaaaaaaaaaagtggaaatcagtctgggattggccttcta
cagagtgcagggttcattgtaagattaagataaacgtggggaaatgaggt
aggctaaaaccagattatggagtgtcaggatgctagcaagggctcaggcg
ttccctggcaggcatttgggagccactgaagattttgagcagcagaggca
cacacagcaatttgggagatggactagaccacagttaggaaacagttgta
ataatccaggcaagggaaacacggcagcctaggttgagggcagagagata
gagaggaagcagtcaatgtgagatgtgcaacagaagaaactcaagggggc
ttggtgttgggacatgaacaggacagaaatgagtggaaggagccaaagat
gcatctcgtgttttgacactaggaggatggagacaagtgtggactcagat
agggaagacaggaatgggcttggcaaggaaaggccagatatgtttccttt
gggaatgcaaagaatagtcttttctagcctcagccaagccagtttctgtt
gtttgaagccttgctcagggacctttcacactaacggctttcaatttgtt
ccgtgacttttacctactgtcactgagacatcattgtgtaagaattatta
tctttactactaggacccttctgtctagagcctatgatgtcgtgttgatc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36046226_36046859
seq2: B6Ng01-185E19.b_42_677 (reverse)

seq1  CCCA-CCACCACCACACACACCCC-AAGCGGTTCTCCAGTGCATACCAGC  48
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCCACCCACCACCACACACACCCCAAAGCGGTTCTCCAGTGCATACCAGC  50

seq1  CAGGTGTCCCATACTGAGTCAGTTCTGAGACATAAATACCTATAGAGTCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCCCATACTGAGTCAGTTCTGAGACATAAATACCTATAGAGTCT  100

seq1  GGGGTTTGGCACTGCACCCTGGAAAATGCCCTATTTCTGACAGCAATCGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTGGCACTGCACCCTGGAAAATGCCCTATTTCTGACAGCAATCGC  150

seq1  AAGTCTGGACCACACAAACCTAGTTCCCAGCCCCCTCCTTTGATCCGGTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGACCACACAAACCTAGTTCCCAGCCCCCTCCTTTGATCCGGTT  200

seq1  AATTAGCCAGGATGCTACTCGGGGCTTGGGAGGTAGGTTTACTGGCTTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCCAGGATGCTACTCGGGGCTTGGGAGGTAGGTTTACTGGCTTTT  250

seq1  TATAAAGCATGTTCTGAAGAGTACAGATGAGCAAGATTCAGGGGGTTGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCATGTTCTGAAGAGTACAGATGAGCAAGATTCAGGGGGTTGGG  300

seq1  AGGCGGGGGCGGGGGGTGGGGGGGTACTGGGAAGTGGGAATCTGCTCTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGGGGCGGGGGGTGGGGGGGTACTGGGAAGTGGGAATCTGCTCTGA  350

seq1  AGCACCTTGGGTGGCCATGTTCCTAGCACTGACAGATCCTCTAATCTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTGGGTGGCCATGTTCCTAGCACTGACAGATCCTCTAATCTGAA  400

seq1  GAAGCCACTGCCACCCGCTGTCTTTCAGGACCTAGTGGGCACCAGCTGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACTGCCACCCGCTGTCTTTCAGGACCTAGTGGGCACCAGCTGTT  450

seq1  TATCGGGTGCCCTATTGTGTGCTAGAACACAAAGGCTACACTGAACTGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGGGTGCCCTATTGTGTGCTAGAACACAAAGGCTACACTGAACTGAG  500

seq1  TTGCCCTGCCAGTGCCTCAAGCAGGAAGGTCTGTTCCCGTTCTAGGTGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTGCCAGTGCCTCAAGCAGGAAGGTCTGTTCCCGTTCTAGGTGTG  550

seq1  AGGTGTGTGCCTGGGCTGGCTAATAAGCCTGCTGCTGCCTCTGCCCACAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTGCCTGGGCTGGCTAATAAGCCTGCTGCTGCCTCTGCCCACAC  600

seq1  TGCTGGAACCTGGTGAGAAGTAGCCAGTGGGAATTC  634
      ||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAACCTGGTGAGAAGTAGCCAGTGGGAATTC  636

seq1: chr2_35888537_35889645
seq2: B6Ng01-185E19.g_67_1167

seq1  GAATTCCAGAGCTCTTGCCCTCAGTTATCATGCTATCCACTGTGTCACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGCTCTTGCCCTCAGTTATCATGCTATCCACTGTGTCACGG  50

seq1  GAACAATGGGGCAGGATGTAGGAAGACGATGCTTCCTGGGGAAGACAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATGGGGCAGGATGTAGGAAGACGATGCTTCCTGGGGAAGACAGCA  100

seq1  CTAGTGTCTGCCTTGAGAGATGGCTCAGGGTTCAAGAGGCAGAGGAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTCTGCCTTGAGAGATGGCTCAGGGTTCAAGAGGCAGAGGAGGAG  150

seq1  GAAGGATGGTTTCCTGGCGAGATAGCAGCCAGATAGACTTAAACGCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGGTTTCCTGGCGAGATAGCAGCCAGATAGACTTAAACGCTAGA  200

seq1  AAGCATCTAGGCATCCATCGGCACAGGCCGGTGATCCCAGTTACCTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTAGGCATCCATCGGCACAGGCCGGTGATCCCAGTTACCTGAGA  250

seq1  AGCTGAGACAGGAAGATCACCAAGTTCAACACCAGCCTGAGCAAGTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGACAGGAAGATCACCAAGTTCAACACCAGCCTGAGCAAGTTAGT  300

seq1  CGAGATAATGTCTCAAACATGGAAGGTAAAACTGGGACTGGAGATGTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATAATGTCTCAAACATGGAAGGTAAAACTGGGACTGGAGATGTAAC  350

seq1  TTAGCTGGAGGGCTTAACTAGCATGCAGGAAGCCCTGGGTTTAACTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGGAGGGCTTAACTAGCATGCAGGAAGCCCTGGGTTTAACTCCCA  400

seq1  GCACGGGAGGAAAAAAAAAAAGTGGAAATCAGTCTGGGATTGGCCTTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGGAGGAAAAAAAAAAAGTGGAAATCAGTCTGGGATTGGCCTTCTA  450

seq1  CAGAGTGCAGGGTTCATTGTAAGATTAAGATAAACGTGGGGAAATGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCAGGGTTCATTGTAAGATTAAGATAAACGTGGGGAAATGAGGT  500

seq1  AGGCTAAAACCAGATTATGGAGTGTCAGGATGCTAGCAAGGGCTCAGGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAAACCAGATTATGGAGTGTCAGGATGCTAGCAAGGGCTCAGGCG  550

seq1  TTCCCTGGCAGGCATTTGGGAGCCACTGAAGATTTTGAGCAGCAGAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGCAGGCATTTGGGAGCCACTGAAGATTTTGAGCAGCAGAGGCA  600

seq1  CACACAGCAATTTGGGAGATGGACTAGACCACAGTTAGGAAACAGTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCAATTTGGGAGATGGACTAGACCACAGTTAGGAAACAGTTGTA  650

seq1  ATAATCCAGGCAAGGGAAACACGGCAGCCTAGGTTGAGGGCAGAGAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCAGGCAAGGGAAACACGGCAGCCTAGGTTGAGGGCAGAGAGATA  700

seq1  GAGAGGAAGCAGTCAATGTGAGATGTGCAACAGAAGAAACTCAAGGGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAGCAGTCAATGTGAGATGTGCAACAGAAGAAACTCAAGGGGGC  750

seq1  TTGGTGTTGGGACATGAACAGGACAGAAATGAGTGGAAGGAGCCAAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTGGGACATGAACAGGACAGAAATGAGTGGAAGGAGCCAAAGAT  800

seq1  GCATCTCGTGTTTTGACACTAGGAGGATGGAGACAAGTGTGGACTCAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCGTGTTTTGACACTAGGAGGATGGAGACAAGTGTGGACTCAGAT  850

seq1  AGGGAAGACAGGAATGGGCTTGGCAGGGAAAGGCCAGATATGTTTCCTTT  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGGAAGACAGGAATGGGCTTGGCAAGGAAAGGCCAGATATGTTTCCTTT  900

seq1  GGGAATGCAAAGAATTAGTC-TTTCTAGCCTCAGGCCAAGCCAGTTTCTG  949
      |||||||||||||| ||||| |||||||||||| ||||||||||||||||
seq2  GGGAATGCAAAGAA-TAGTCTTTTCTAGCCTCA-GCCAAGCCAGTTTCTG  948

seq1  TTGTTTGAAGCCCTGCTCAGGGGACCTTCACACTAACGGCTTTCAAATTG  999
      |||||||||||| |||||||||  | |||||||||||||||||||| |||
seq2  TTGTTTGAAGCCTTGCTCAGGGACCTTTCACACTAACGGCTTTCAATTTG  998

seq1  TTCCGTGACCTTTTACCTACTGCCACTGAGACCTTCATTTGTTGTAAGAA  1049
      |||||||| ||||||||||||| |||||||| | |||||   |||||| |
seq2  TTCCGTGA-CTTTTACCTACTGTCACTGAGA-CATCATT--GTGTAAG-A  1043

seq1  ATTATTATCTTTAACTACCTAGACCCTTCTGTCCTAGAAGGCTATGGTGT  1099
      |||||||||||| |||||   ||||||||||| |||| || ||||| |||
seq2  ATTATTATCTTT-ACTACTAGGACCCTTCTGT-CTAG-AGCCTATGATGT  1090

seq1  CGTG-TGATCC  1109
      |||| ||||||
seq2  CGTGTTGATCC  1101