BAC Information

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BAC

Clone NameB6Ng01-186C01
Chromosome2 (Build37)
Map Location 60,105,409 - 60,105,988
singlet/doubletsinglet
Overlap geneCd302
Upstream genePkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7
Downstream geneLOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1, ENSMUSG00000075325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186C01.bB6Ng01-186C01.g
ACCGA011053GA011054
length1,180574
definitionB6Ng01-186C01.b B6Ng01-186C01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagtatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacacgcctccattgttggtg
ggattgcaagcttatacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcttgcaatacctctcctgggt
atatatccagaagatgttccaactggtaagaaggacacatgctccactaa
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaatagaggaatggatacagaaagtgtgatacatttacataatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctagagggtatcatcctgagtgaggtaacccaatcacaaa
agaactcacataatatgtactcactgataagtggatattagcccagaaac
ttagactatccaagatacaggatacaatttgcaaaacacatgaaactcaa
gaagaacaaagaccaaagtgtggacactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagaccaagtttggagctgaaaca
aaaggatggaccatccagagactgcctcccctgccccccagggatccatc
ccataaccagcctccaaacactgacaccattgcatacgccagcaagattt
tgctgaaaggaccctgatatagctgtctcttgtgaggctatgcccggtgt
ctggcaaacacagaagtggatgctcacagtcagctattggatgggaacac
aggccccaatggaggagctagagaaagtacccaaggagctaaagggtctg
caccctatagtggaacaacatatgaactacagtaccccagagctcgtttt
tctagctgcatattgtagcagagatggcctagtcgcatcattgggcaaag
agaggccctggatctttcaaactttaatatgcccaagtacaggacgcaac
gcccaaagtagaaattagggtgggtaatag
tctctgtaggcccaagtccccacacatgtgtgtgctccaccagtgaactg
cttacccgtcctgttaaaggtgtgcttggagtagagacagctcatgtatc
tggctctgtcccaaagacaagcttctgttaccctcttgttgtcttgacat
tcctttagttaaatctaaaaccaccagacctcagggtgaaatatgagctg
gtgggactggccttgagttccttaaaggggctttttcttctgtggtggaa
ctaagaatccacctgattacctcatcacacttttttgaaactcccaactc
cattacttagagaggcctccctgcctttaatccctgcacttggtggcaaa
ggcaggcagatccaggctaccaaggttacaaagtgaaagggggtaaaggg
gaggggacaaggaagtgtctgggtgtggtgacgcccagctataatcccaa
caattagaaaatagaagcaggatgaccaggggttccaacagacagttgtg
agctgtcatggtgaaaccctgtctcaaaaaataagggctacttcagtccc
caatgtcactgggggtggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60105409_60105988
seq2: B6Ng01-186C01.g_65_644 (reverse)

seq1  CCCACCCCACCCCCAGTGACATTGGGGACTGAAGTAGCCCTTATTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCACCCCCAGTGACATTGGGGACTGAAGTAGCCCTTATTTTTTG  50

seq1  AGACAGGGTTTCACCATGACAGCTCACAACTGTCTGTTGGAACCCCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCACCATGACAGCTCACAACTGTCTGTTGGAACCCCTGGT  100

seq1  CATCCTGCTTCTATTTTCTAATTGTTGGGATTATAGCTGGGCGTCACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGCTTCTATTTTCTAATTGTTGGGATTATAGCTGGGCGTCACCAC  150

seq1  ACCCAGACACTTCCTTGTCCCCTCCCCTTTACCCCCTTTCACTTTGTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACACTTCCTTGTCCCCTCCCCTTTACCCCCTTTCACTTTGTAAC  200

seq1  CTTGGTAGCCTGGATCTGCCTGCCTTTGCCACCAAGTGCAGGGATTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAGCCTGGATCTGCCTGCCTTTGCCACCAAGTGCAGGGATTAAAG  250

seq1  GCAGGGAGGCCTCTCTAAGTAATGGAGTTGGGAGTTTCAAAAAAGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAGGCCTCTCTAAGTAATGGAGTTGGGAGTTTCAAAAAAGTGTGA  300

seq1  TGAGGTAATCAGGTGGATTCTTAGTTCCACCACAGAAGAAAAAGCCCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAATCAGGTGGATTCTTAGTTCCACCACAGAAGAAAAAGCCCCTT  350

seq1  TAAGGAACTCAAGGCCAGTCCCACCAGCTCATATTTCACCCTGAGGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAACTCAAGGCCAGTCCCACCAGCTCATATTTCACCCTGAGGTCTG  400

seq1  GTGGTTTTAGATTTAACTAAAGGAATGTCAAGACAACAAGAGGGTAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTAGATTTAACTAAAGGAATGTCAAGACAACAAGAGGGTAACAG  450

seq1  AAGCTTGTCTTTGGGACAGAGCCAGATACATGAGCTGTCTCTACTCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGTCTTTGGGACAGAGCCAGATACATGAGCTGTCTCTACTCCAAG  500

seq1  CACACCTTTAACAGGACGGGTAAGCAGTTCACTGGTGGAGCACACACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTTAACAGGACGGGTAAGCAGTTCACTGGTGGAGCACACACATG  550

seq1  TGTGGGGACTTGGGCCTACAGAGAGAATTC  580
      ||||||||||||||||||||||||||||||
seq2  TGTGGGGACTTGGGCCTACAGAGAGAATTC  580