BAC Information

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BAC

Clone NameB6Ng01-186H17
Chromosome2 (Build37)
Map Location 160,212,306 - 160,345,570
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043689, Gm826, Mafb
Downstream geneLOC100043892, Top1, Plcg1, Zhx3, Lpin3, Emilin3, Chd6, LOC100043693, LOC100043694, LOC383769, LOC629655, LOC383770
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186H17.bB6Ng01-186H17.g
ACCGA011313GA011314
length642394
definitionB6Ng01-186H17.b B6Ng01-186H17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,212,306 - 160,212,947)(160,345,171 - 160,345,570)
sequence
gaattcaagaggcagaggcaggtggacctctgagttcaagaccagcctgg
tctacaaagcaagttctaggacacccagcgctatacaaagcaaccctgtc
ccgaaaaaccaatgtttttacaaaagcagaaaataacaatgtggataaga
gtaactgccagacagtgagtcttcggataaacagggtgtcgttaccacac
ccctaccccaagactcagggtcctaggcaggaaagaaggaaagaaagatg
gtaagagaaagaggtggcagaggacttcacggaagcagcttcttccagac
acgagaggtttgccatacatatggtcacacagagactgagacagcatgaa
gttcaaacgagacaaaatcccagcactgagaaacagaagtggataagctc
ttgatcaggaagagatttgcaattgatatctcctaggaaagggaaattca
gctttcttcaacttagtgtcactgagtctgtctgtcaatcacactctagg
cccggctacatgctcaggagtagccaccaacacaaaacagattctgtgga
agttttttgtgtgttgttttgggttttgttttgttttgttttgttttgtt
ttgtttaagagaaagaaagaagttgcatggtgggggaggtaa

acagctccacaaatctcaacagacgtaccagagtctgtgccccaccgtgc
cgagcagctttggacactttctggattctcaagcctggtgttcttcctct
aaatgctacaaggtatggctgttttaggtgatcagacatgcatggcttcc
agctacccccttctggtccatgatgagagggtaggatgggagaagtgagg
gctagcctatagctgagctcagaactgcctgttcctccagcatctcaagt
cgggatcgccctgaccatgatgttccaaaggtcatttccaaggtcttgag
ttctgggaaggggtactcctcttgagggttgggtcccattaccattctat
cttacacctctggagctggagttggggagaaggagggagggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_160212306_160212947
seq2: B6Ng01-186H17.b_45_686

seq1  GAATTCAAGAGGCAGAGGCAGGTGGACCTCTGAGTTCAAGACCAGCCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGGCAGAGGCAGGTGGACCTCTGAGTTCAAGACCAGCCTGG  50

seq1  TCTACAAAGCAAGTTCTAGGACACCCAGCGCTATACAAAGCAACCCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAAGCAAGTTCTAGGACACCCAGCGCTATACAAAGCAACCCTGTC  100

seq1  CCGAAAAACCAATGTTTTTACAAAAGCAGAAAATAACAATGTGGATAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAAACCAATGTTTTTACAAAAGCAGAAAATAACAATGTGGATAAGA  150

seq1  GTAACTGCCAGACAGTGAGTCTTCGGATAAACAGGGTGTCGTTACCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGCCAGACAGTGAGTCTTCGGATAAACAGGGTGTCGTTACCACAC  200

seq1  CCCTACCCCAAGACTCAGGGTCCTAGGCAGGAAAGAAGGAAAGAAAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCCCAAGACTCAGGGTCCTAGGCAGGAAAGAAGGAAAGAAAGATG  250

seq1  GTAAGAGAAAGAGGTGGCAGAGGACTTCACGGAAGCAGCTTCTTCCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGAAAGAGGTGGCAGAGGACTTCACGGAAGCAGCTTCTTCCAGAC  300

seq1  ACGAGAGGTTTGCCATACATATGGTCACACAGAGACTGAGACAGCATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAGGTTTGCCATACATATGGTCACACAGAGACTGAGACAGCATGAA  350

seq1  GTTCAAACGAGACAAAATCCCAGCACTGAGAAACAGAAGTGGATAAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAACGAGACAAAATCCCAGCACTGAGAAACAGAAGTGGATAAGCTC  400

seq1  TTGATCAGGAAGAGATTTGCAATTGATATCTCCTAGGAAAGGGAAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAGGAAGAGATTTGCAATTGATATCTCCTAGGAAAGGGAAATTCA  450

seq1  GCTTTCTTCAACTTAGTGTCACTGAGTCTGTCTGTCAATCACACTCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTTCAACTTAGTGTCACTGAGTCTGTCTGTCAATCACACTCTAGG  500

seq1  CCCGGCTACATGCTCAGGAGTAGCCACCAACACAAAACAGATTCTGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCTACATGCTCAGGAGTAGCCACCAACACAAAACAGATTCTGTGGA  550

seq1  AGTTTTTTGTGTGTTGTTTTGGGTTTTGTTTTGTTTTGTTTTGTTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTGTGTGTTGTTTTGGGTTTTGTTTTGTTTTGTTTTGTTTTGTT  600

seq1  TTGTTTAAGAGAAAGAAAGAAGTTGCATGGTGGGGGAGGTAA  642
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAAGAGAAAGAAAGAAGTTGCATGGTGGGGGAGGTAA  642


seq1: chr2_160345171_160345570
seq2: B6Ng01-186H17.g_62_461 (reverse)

seq1  GCTCCCTCCCTCCTTCTCCCCAACTCCAGCTCCAGAGGTGTAAGATAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCCCTCCTTCTCCCCAACTCCAGCTCCAGAGGTGTAAGATAGAA  50

seq1  TGGTAATGGGACCCAACCCTCAAGAGGAGTACCCCTTCCCAGAACTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATGGGACCCAACCCTCAAGAGGAGTACCCCTTCCCAGAACTCAAG  100

seq1  ACCTTGGAAATGACCTTTGGAACATCATGGTCAGGGCGATCCCGACTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGAAATGACCTTTGGAACATCATGGTCAGGGCGATCCCGACTTGA  150

seq1  GATGCTGGAGGAACAGGCAGTTCTGAGCTCAGCTATAGGCTAGCCCTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGAGGAACAGGCAGTTCTGAGCTCAGCTATAGGCTAGCCCTCAC  200

seq1  TTCTCCCATCCTACCCTCTCATCATGGACCAGAAGGGGGTAGCTGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCATCCTACCCTCTCATCATGGACCAGAAGGGGGTAGCTGGAAGC  250

seq1  CATGCATGTCTGATCACCTAAAACAGCCATACCTTGTAGCATTTAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATGTCTGATCACCTAAAACAGCCATACCTTGTAGCATTTAGAGGA  300

seq1  AGAACACCAGGCTTGAGAATCCAGAAAGTGTCCAAAGCTGCTCGGCACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACCAGGCTTGAGAATCCAGAAAGTGTCCAAAGCTGCTCGGCACGG  350

seq1  TGGGGCACAGACTCTGGTACGTCTGTTGAGATTTGTGGAGCTGTGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACAGACTCTGGTACGTCTGTTGAGATTTGTGGAGCTGTGAATTC  400


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