BAC Information

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BAC

Clone NameB6Ng01-186M18
Chromosome2 (Build37)
Map Location 88,100,774 - 88,229,907
singlet/doubletdoublet
Overlap geneOlfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177
Upstream geneOlfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1
Downstream geneOlfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186M18.bB6Ng01-186M18.g
ACCGA011547GA011548
length1,1651,125
definitionB6Ng01-186M18.b B6Ng01-186M18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,100,774 - 88,101,934)(88,228,776 - 88,229,907)
sequence
gaattcagcatggttgtatctcactatgatgcttgtgaattaaaccctaa
cttcacagatatatcatacccattgatacccattgatgcagcagtgacat
caatgctatcagggtaaccaactgctttctgattagtcttcagatctggc
catcccagaagagaactcatgtgtatagagtaaatatggaaaacaaacaa
acacatcaataaaaatctaacagctggggcatcataagtcctgggggaat
ctactactattattatgataaaaggacatgctgctaaactgtcttttatt
tacatttatttgagtagatttgtgttgcacttgattgtggttggggcagt
tctgtttataattggcaatgatttgcaaacagaattatctctacaaatac
atgagaatataggactattgagtgcacagccctaaactttttcagcacac
ccttaagacccctccttggctttttatttaaaatctttaagcactatgta
aaaatatgtgctgtctataccttgagtttctgatccatggccttctactt
tgtgtatcctcagttgaaattagctcagttcttcaatttatattccctct
tttacactcttttagcttttttctcatgcaaagggatgattatcccatga
ggatagtgatttttaaggaatattttaattagttttttgagaaattcata
caaaggaacccaatcttgatactgctaaactgaccaaaaaatttagacta
caaaggtcacaggcctaatgaaaacatagttatatgtttgtttctttgtg
tgtgtttctttttattattctctcacacaacatatcctgactcatctccc
tgtactgcttccagtcaacctcccccccacgttctctcactccagtttcc
tgcttctcagcttccctttaagaaggatcagtctttctgagtgatatcaa
ttaacaataacactagacacacaacattatattaaatttggtttagcaaa
caggagtagaggatgagtcgcaaaagcagcaaagagtaagttgcacccac
tactcctactgttatgagttcccaccaaaacaccaaggcaaacagcattc
atgcagaggacttcgcataagatgcatgaagatttccatgactgtttgca
ttcaggtctctgtga
gaattcctcacattctcccaattatttcacctactctttctacttttcat
tgtcttgaaataatgtaatcctgatatcatgagtgtttctgtgttcactg
tttgctaacattgttttggtgatacaaaggatagaactcaggcttcatat
acactgtgacactgttttatccacacaatcacatttgagttaggatgcat
aatcgctttcaaattgtagacttttagacgtcattgatataatagggaat
aatctagaagcaaactttcaatcagtctgctagataacacaagaaattca
ctaaacattctatgcaaaggagaactttgtaaaactaattgtgtatagta
ccagtgctgctgagtttaaaattaatttccatttcagtgaagttaaaaac
acagcgtatatctaaagagtgttttatcagaacaataatagaaagcaaac
aggaaaatagacaaaattctgaagaactcagttctttaaaaatgaagaat
tttgttaatttcaacagagtaattgcatacatgaactcatttgaatttat
tgagacgtcatgcatttagtttttactttacacaaaacttatacagtaga
tgaatcaaaagaataaccaatgatcttgaattacttgaatttattctgta
cacaattttatttatcccttaaaataatatatgttatgtaagtgaattgc
caatttttaaactcaatgagtcacaaaggagacatgaaagaaggaggcag
acagtttgagaaggagggttttgcaggagtgaaaggaagtaagagagagt
agcagggtaaatatgatcacagtaccttgcacatttctataaatttatta
aaatctatataacatctacaaaccattttatcactactttggcaaaaatt
ctgaactttatctctttcatctgcctgtaatttttcatgatttactaaac
ttaaataaaggaacatcacttttacataattctggcctaggtgtaagcag
gtgcaacagatcttctgagatcaatcacttgcctgtgttttcttcactta
taaagagaatctgagtgggcactactgctggaatgccttttctgtaaaca
atcaagggtacaaggacacctctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88100774_88101934
seq2: B6Ng01-186M18.b_47_1211

seq1  GAATTCAGCATGGTTGTATCTCACTATGATGCTTGTGAATTAAACCCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATGGTTGTATCTCACTATGATGCTTGTGAATTAAACCCTAA  50

seq1  CTTCACAGATATATCATACCCATTGATACCCATTGATGCAGCAGTGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGATATATCATACCCATTGATACCCATTGATGCAGCAGTGACAT  100

seq1  CAATGCTATCAGGGTAACCAACTGCTTTCTGATTAGTCTTCAGATCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATCAGGGTAACCAACTGCTTTCTGATTAGTCTTCAGATCTGGC  150

seq1  CATCCCAGAAGAGAACTCATGTGTATAGAGTAAATATGGAAAACAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAGAAGAGAACTCATGTGTATAGAGTAAATATGGAAAACAAACAA  200

seq1  ACACATCAATAAAAATCTAACAGCTGGGGCATCATAAGTCCTGGGGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCAATAAAAATCTAACAGCTGGGGCATCATAAGTCCTGGGGGAAT  250

seq1  CTACTACTATTATTATGATAAAAGGACATGCTGCTAAACTGTCTTTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACTATTATTATGATAAAAGGACATGCTGCTAAACTGTCTTTTATT  300

seq1  TACATTTATTTGAGTAGATTTGTGTTGCACTTGATTGTGGTTGGGGCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATTTGAGTAGATTTGTGTTGCACTTGATTGTGGTTGGGGCAGT  350

seq1  TCTGTTTATAATTGGCAATGATTTGCAAACAGAATTATCTCTACAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTATAATTGGCAATGATTTGCAAACAGAATTATCTCTACAAATAC  400

seq1  ATGAGAATATAGGACTATTGAGTGCACAGCCCTAAACTTTTTCAGCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATATAGGACTATTGAGTGCACAGCCCTAAACTTTTTCAGCACAC  450

seq1  CCTTAAGACCCCTCCTTGGCTTTTTATTTAAAATCTTTAAGCACTATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGACCCCTCCTTGGCTTTTTATTTAAAATCTTTAAGCACTATGTA  500

seq1  AAAATATGTGCTGTCTATACCTTGAGTTTCTGATCCATGGCCTTCTACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTGCTGTCTATACCTTGAGTTTCTGATCCATGGCCTTCTACTT  550

seq1  TGTGTATCCTCAGTTGAAATTAGCTCAGTTCTTCAATTTATATTCCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCCTCAGTTGAAATTAGCTCAGTTCTTCAATTTATATTCCCTCT  600

seq1  TTTACACTCTTTTAGCTTTTTTCTCATGCAAAGGGATGATTATCCCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACTCTTTTAGCTTTTTTCTCATGCAAAGGGATGATTATCCCATGA  650

seq1  GGATAGTGATTTTTAAGGAATATTTTAATTAGTTTTTTGAGAAATTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTGATTTTTAAGGAATATTTTAATTAGTTTTTTGAGAAATTCATA  700

seq1  CAAAGGAACCCAATCTTGATACTGCTAAACTGACCAAAAAATTTAGACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAACCCAATCTTGATACTGCTAAACTGACCAAAAAATTTAGACTA  750

seq1  CAAAGGTCACAGGCCTAATGAAAACATAGTTATATGTTTGTTTCTTTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCACAGGCCTAATGAAAACATAGTTATATGTTTGTTTCTTTGTG  800

seq1  TGTGTTTCTTTTTATTATTCTCTCACACAACATATCCTGACTCATCTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTCTTTTTATTATTCTCTCACACAACATATCCTGACTCATCTCCC  850

seq1  TGTACTGCTTCCAGTCAACCTCCCCCCCACGTTCTCTCACTCCAGTTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGCTTCCAGTCAACCTCCCCCCCACGTTCTCTCACTCCAGTTTCC  900

seq1  TGCTTCTCAGCTTCCCTTTAAGAAGGATCAGTC-TTCTGAGTGATATCAA  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTTCTCAGCTTCCCTTTAAGAAGGATCAGTCTTTCTGAGTGATATCAA  950

seq1  TTAACAATAACACTAGACACACAACATTATATTAAATTTGGTTTAGGCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTAACAATAACACTAGACACACAACATTATATTAAATTTGGTTTA-GCAA  999

seq1  ACAAGGAGTAGAGGATGAGTCGCAAAAGCAGGCAAAGGAGTAAGTTGCA-  1048
      || ||||||||||||||||||||||||||| ||||| |||||||||||| 
seq2  AC-AGGAGTAGAGGATGAGTCGCAAAAGCA-GCAAA-GAGTAAGTTGCAC  1046

seq1  CCACTACTCCTACTGTTATGAG-TCCCACCAAAACACCAAGCCAAACAGC  1097
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  CCACTACTCCTACTGTTATGAGTTCCCACCAAAACACCAAGGCAAACAGC  1096

seq1  ATTCATGCAGAGGACCTCGCAT-AGATGCATGAAGA-TTCCATGACTG-T  1144
      ||||||||||||||| |||||| ||||||||||||| ||||||||||| |
seq2  ATTCATGCAGAGGACTTCGCATAAGATGCATGAAGATTTCCATGACTGTT  1146

seq1  TGCA-TCA-GTCTCTGTGA  1161
      |||| ||| ||||||||||
seq2  TGCATTCAGGTCTCTGTGA  1165

seq1: chr2_88228776_88229907
seq2: B6Ng01-186M18.g_65_1189 (reverse)

seq1  ATAGAGGTGGTCTTTGTAAACTTTGATTTGTTTACAGAAAA-GCA-TCCA  48
      |||||||| ||| |||| | | |||| |||||||||||||| ||| ||||
seq2  ATAGAGGT-GTCCTTGT-ACCCTTGA-TTGTTTACAGAAAAGGCATTCCA  47

seq1  GCAGTTAGTGCCAACTTCAGATTCCTCTTTATAAGTGAAAGAAACACAGG  98
      |||| ||||||| || ||||||| |||||||||||||||  |||||||||
seq2  GCAG-TAGTGCCCAC-TCAGATT-CTCTTTATAAGTGAAGAAAACACAGG  94

seq1  CAAAGTTGAATTGATCTCAGAAGATCTGTTTGCACCTGCTTACACCTAGG  148
      | ||||   ||||||||||||||||||| |||||||||||||||||||||
seq2  C-AAGT--GATTGATCTCAGAAGATCTG-TTGCACCTGCTTACACCTAGG  140

seq1  -CAGAATTATGTAAAAGTGATGTT-CTTTATTTAAGTTTAGTAAATCATG  196
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAGAATTATGTAAAAGTGATGTTCCTTTATTTAAGTTTAGTAAATCATG  190

seq1  AAAAATTACAGGCAGATGAAAGAGATAAAGTTCAGAATTTTTGCCAAAGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACAGGCAGATGAAAGAGATAAAGTTCAGAATTTTTGCCAAAGT  240

seq1  AGTGATAAAATGGTTTGTAGATGTTATATAGATTTTAATAAATTTATAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAAAATGGTTTGTAGATGTTATATAGATTTTAATAAATTTATAGA  290

seq1  AATGTGCAAGGTACTGTGATCATATTTACCCCTGCTACTCTCTCTTACTT  346
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATGTGCAAGGTACTGTGATCATATTTA-CCCTGCTACTCTCTCTTACTT  339

seq1  CCTTTCACTCCTGCAAAACCCTCCTTCTCAAACTGTCTGCCTCCTTCTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACTCCTGCAAAACCCTCCTTCTCAAACTGTCTGCCTCCTTCTTT  389

seq1  CATGTCTCCTTTGTGACTCATTGAGTTTAAAAATTGGCAATTCACTTACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTCCTTTGTGACTCATTGAGTTTAAAAATTGGCAATTCACTTACA  439

seq1  TAACATATATTATTTTAAGGGATAAATAAAATTGTGTACAGAATAAATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATATTATTTTAAGGGATAAATAAAATTGTGTACAGAATAAATTC  489

seq1  AAGTAATTCAAGATCATTGGTTATTCTTTTGATTCATCTACTGTATAAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATTCAAGATCATTGGTTATTCTTTTGATTCATCTACTGTATAAGT  539

seq1  TTTGTGTAAAGTAAAAACTAAATGCATGACGTCTCAATAAATTCAAATGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAAAGTAAAAACTAAATGCATGACGTCTCAATAAATTCAAATGA  589

seq1  GTTCATGTATGCAATTACTCTGTTGAAATTAACAAAATTCTTCATTTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGTATGCAATTACTCTGTTGAAATTAACAAAATTCTTCATTTTTA  639

seq1  AAGAACTGAGTTCTTCAGAATTTTGTCTATTTTCCTGTTTGCTTTCTATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGAGTTCTTCAGAATTTTGTCTATTTTCCTGTTTGCTTTCTATT  689

seq1  ATTGTTCTGATAAAACACTCTTTAGATATACGCTGTGTTTTTAACTTCAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTGATAAAACACTCTTTAGATATACGCTGTGTTTTTAACTTCAC  739

seq1  TGAAATGGAAATTAATTTTAAACTCAGCAGCACTGGTACTATACACAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGAAATTAATTTTAAACTCAGCAGCACTGGTACTATACACAATT  789

seq1  AGTTTTACAAAGTTCTCCTTTGCATAGAATGTTTAGTGAATTTCTTGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACAAAGTTCTCCTTTGCATAGAATGTTTAGTGAATTTCTTGTGT  839

seq1  TATCTAGCAGACTGATTGAAAGTTTGCTTCTAGATTATTCCCTATTATAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGCAGACTGATTGAAAGTTTGCTTCTAGATTATTCCCTATTATAT  889

seq1  CAATGACGTCTAAAAGTCTACAATTTGAAAGCGATTATGCATCCTAACTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACGTCTAAAAGTCTACAATTTGAAAGCGATTATGCATCCTAACTC  939

seq1  AAATGTGATTGTGTGGATAAAACAGTGTCACAGTGTATATGAAGCCTGAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGATTGTGTGGATAAAACAGTGTCACAGTGTATATGAAGCCTGAG  989

seq1  TTCTATCCTTTGTATCACCAAAACAATGTTAGCAAACAGTGAACACAGAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCTTTGTATCACCAAAACAATGTTAGCAAACAGTGAACACAGAA  1039

seq1  ACACTCATGATATCAGGATTACATTATTTCAAGACAATGAAAAGTAGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATGATATCAGGATTACATTATTTCAAGACAATGAAAAGTAGAAA  1089

seq1  GAGTAGGTGAAATAATTGGGAGAATGTGAGGAATTC  1132
      ||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGTGAAATAATTGGGAGAATGTGAGGAATTC  1125