MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-187E22
Chromosome	X (Build37)	2 (Build37)
Map Location	11,538,840 - 11,539,795	97,457,603 - 97,457,681
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Ppia-psx_105.1, LOC100042922, LOC100042927, LOC100042929, LOC100042931, OTTMUSG00000016790, LOC100042939, LOC100042943, LOC100042944, LOC100042946, EG236663, 8430439B09Rik, LOC669520, Rpl23a-ps, LOC100043945
Downstream gene	Bcor, 2900008C10Rik, LOC385323, LOC100043946, LOC628441, Atp6ap2, LOC668986, EG245347, 1810030O07Rik, Crsp2, LOC668987, LOC245350, Ppia-psx_132.1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ppia-psx_105.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547156
definition	note : peptidylprolyl isomerase A pseudogene x_105.1 pseudo : _no_value

name	LOC100042922 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	LOC100042927 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	LOC100042929 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	LOC100042931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	OTTMUSG00000016790 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547160 MGI:3649617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042939 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	LOC100042943 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	LOC100042944 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	LOC100042946 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins

name	EG236663 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236663 MGI:3643273
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	8430439B09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78147 MGI:1925397
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC669520 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669520
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Rpl23a-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100043945 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	Bcor (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71458 MGI:1918708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	2900008C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72937 MGI:1920187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs

name	LOC385323 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043946 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC628441 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628441
definition	note : ribosomal protein L30 pseudogene pseudo : _no_value

name	Atp6ap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70495 MGI:1917745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668986 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 49 ESTs, 5 Proteins pseudo : _no_value

name	EG245347 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245347 MGI:3644533
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins

name	1810030O07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69155 MGI:1916405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crsp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26896 MGI:1349442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC668987 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668987
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC245350 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245350
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 17 Proteins

name	Ppia-psx_132.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606727
definition	note : peptidylprolyl isomerase A pseudogene x_132.1 pseudo : _no_value

name	LOC100042922 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270968 GeneID:100042922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001476992.1

name	LOC100042927 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270970 GeneID:100042927
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : hypothetical protein LOC100042927 transcript_id : XM_001477006.1

name	LOC100042929 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270972 GeneID:100042929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001477023.1

name	LOC100042931 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270974 GeneID:100042931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001477035.1

name	OTTMUSG00000016790 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347343 GeneID:547160 MGI:3649617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000016790 transcript_id : NM_001025260.2

name	LOC100042939 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270976 GeneID:100042939
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001477063.1

name	LOC100042943 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270978 GeneID:100042943
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001477078.1

name	LOC100042944 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270980 GeneID:100042944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001477092.1

name	LOC100042946 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270982 GeneID:100042946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 6 Proteins product : similar to 1700012L04Rik protein transcript_id : XM_001477106.1

name	EG236663 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20983169 GeneID:236663 MGI:3643273
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG236663 transcript_id : XM_141620.1

name	8430439B09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270984 GeneID:78147 MGI:1925397
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 8430439B09 gene transcript_id : XM_001477135.1

name	LOC669520 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271041 GeneID:669520
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC669520 transcript_id : XM_001481253.1

name	Bcor (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66792787 GeneID:71458 MGI:1918708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl6 interacting corepressor transcript_id : NM_175045.2

name	Bcor (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351506 GeneID:71458 MGI:1918708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl6 interacting corepressor transcript_id : NM_175046.2

name	Bcor (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365597 GeneID:71458 MGI:1918708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl6 interacting corepressor transcript_id : NM_175044.2

name	Bcor (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142346423 GeneID:71458 MGI:1918708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl6 interacting corepressor transcript_id : NM_029510.2

name	2900008C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270986 GeneID:72937 MGI:1920187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs product : RIKEN cDNA 2900008C10 gene transcript_id : XM_001477165.1

name	LOC100043946 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271044 GeneID:100043946
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100043946 transcript_id : XM_001481254.1

name	Atp6ap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801711 GeneID:70495 MGI:1917745
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal accessory protein 2 transcript_id : NM_027439.3

name	EG245347 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407015 GeneID:245347 MGI:3644533
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 6 Proteins product : predicted gene, EG245347 transcript_id : XM_141624.4

name	1810030O07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372747 GeneID:69155 MGI:1916405
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810030O07 gene transcript_id : NM_175141.3

name	Crsp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115270976 GeneID:26896 MGI:1349442
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cofactor required for Sp1 transcriptional activation, subunit 2 transcript_id : NM_001048208.1

name	Crsp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115270971 GeneID:26896 MGI:1349442
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cofactor required for Sp1 transcriptional activation, subunit 2 transcript_id : NM_012005.3

name	LOC245350 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407016 GeneID:245350
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 17 Proteins product : similar to Ubiquitin-conjugating enzyme E2Q (putative) 2 transcript_id : XM_141626.5

name	LOC100042922 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270969 GeneID:100042922
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477042.1

name	LOC100042927 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270971 GeneID:100042927
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477056.1

name	LOC100042929 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270973 GeneID:100042929
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477073.1

name	LOC100042931 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270975 GeneID:100042931
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477085.1

name	OTTMUSG00000016790 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608196 GeneID:547160 MGI:3649617
definition	codon_start : 1 note : Novel protein similar to Histone H2A product : hypothetical protein LOC547160 protein_id : NP_001020431.1

name	LOC100042939 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270977 GeneID:100042939
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477113.1

name	LOC100042943 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270979 GeneID:100042943
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477128.1

name	LOC100042944 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270981 GeneID:100042944
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477142.1

name	LOC100042946 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270983 GeneID:100042946
definition	codon_start : 1 product : similar to 1700012L04Rik protein protein_id : XP_001477156.1

name	EG236663 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20983170 GeneID:236663 MGI:3643273
definition	codon_start : 1 product : hypothetical protein protein_id : XP_141620.1

name	8430439B09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270985 GeneID:78147 MGI:1925397
definition	codon_start : 1 product : hypothetical protein LOC78147 protein_id : XP_001477185.1

name	LOC669520 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271042 GeneID:669520
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481303.1

name	Bcor (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281849 CCDS:CCDS30022.1 GeneID:71458 MGI:1918708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform d is encoded by transcript variant d; BCL-6 corepressor product : BCL-6 interacting corepressor isoform d protein_id : NP_778211.1

name	Bcor (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281843 GeneID:71458 MGI:1918708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform b is encoded by transcript variant b; BCL-6 corepressor product : BCL-6 interacting corepressor isoform b protein_id : NP_778209.1

name	Bcor (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66792788 CCDS:CCDS30021.1 GeneID:71458 MGI:1918708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant c; BCL-6 corepressor product : BCL-6 interacting corepressor isoform c protein_id : NP_778210.2

name	Bcor (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28144863 GeneID:71458 MGI:1918708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant a; BCL-6 corepressor product : BCL-6 interacting corepressor isoform a protein_id : NP_083786.1

name	2900008C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270987 GeneID:72937 MGI:1920187
definition	codon_start : 1 product : hypothetical protein LOC72937 protein_id : XP_001477215.1

name	LOC100043946 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271045 GeneID:100043946
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481304.1

name	Atp6ap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21361250 CCDS:CCDS30023.1 GeneID:70495 MGI:1917745
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : ATPase, H+ transporting, lysosomal interacting protein 1; ATPase, H+ transporting, lysosomal interacting protein 2 product : ATPase, H+ transporting, lysosomal accessory protein 2 protein_id : NP_081715.1

name	EG245347 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82999881 GeneID:245347 MGI:3644533
definition	codon_start : 1 product : hypothetical protein protein_id : XP_141624.3

name	1810030O07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424732 CCDS:CCDS30024.1 GeneID:69155 MGI:1916405
definition	codon_start : 1 note : Novel transcript product : hypothetical protein LOC69155 protein_id : NP_780350.1

name	Crsp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115270977 GeneID:26896 MGI:1349442
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0003713 - transcription coactivator activity [Evidence ISS] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : isoform a is encoded by transcript variant 1; cofactor required for Sp1 transcriptional activation subunit 2 (150 kDa) product : cofactor required for Sp1 transcriptional activation, subunit 2 isoform a protein_id : NP_001041673.1

name	Crsp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115270972 GeneID:26896 MGI:1349442
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0003713 - transcription coactivator activity [Evidence ISS] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS] codon_start : 1 note : isoform b is encoded by transcript variant 2; cofactor required for Sp1 transcriptional activation subunit 2 (150 kDa) product : cofactor required for Sp1 transcriptional activation, subunit 2 isoform b protein_id : NP_036135.3

name	LOC245350 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51830637 GeneID:245350
definition	codon_start : 1 product : similar to Ubiquitin-conjugating enzyme E2Q (putative) 2 protein_id : XP_141626.3

name	Rpl23a-ps (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628338
definition	number : 1 pseudo : _no_value

name	LOC385323 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385323
definition	number : 2 pseudo : _no_value

name	LOC385323 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385323
definition	number : 1 pseudo : _no_value

name	LOC668987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668987
definition	number : 1 pseudo : _no_value

name	LOC668987 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668987
definition	number : 2 pseudo : _no_value

name	LOC100043945 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271043 GeneID:100043945
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)-like pseudo : _no_value transcript_id : XR_035068.1

name	LOC668986 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271046 GeneID:668986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 49 ESTs, 5 Proteins product : similar to Nol5a protein pseudo : _no_value transcript_id : XR_035069.1

clone name	MSMg01-047P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-381P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239F19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-187E22.b	B6Ng01-187E22.g
ACC	GA011919	GA011920
length	955	569
definition	B6Ng01-187E22.b	B6Ng01-187E22.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(11,538,840 - 11,539,795)	(97,457,603 - 97,457,681)
sequence	gaattctcaaaaaagaaaattcaaattgaataagagggagaatttcccga ttgcatttaaaattaagcctattctttaaagctctcgaatattctgtgat caagtggccagaacatttttaaagtagggcacagcatcagtgcaaccaac ctttaatataggaagggtttggtaactcttgttttctctgtagttgatag cccagacatagtccagtggtggccatatggtctggacaccaccctagaaa cccttaggaactgattggcaccccaaaatacattcaagatcctgaaagaa caggacccttaactagcaattaactaactcattgctattgcagccaacta ttttctccaccaggacactatgagctttgggggaggaaatgcttttcacc acacaggtttatttctggcattgtgacctccaaacacactcagtgaggac aacgcaccttgagtgtttcaagtggggatctccccccacccccgagtctc tgtcaggaagatggaagggtctggcgcttgtccccacaagcccagtttga aatggtacctgagtgtcagcccacagcaccgccacctcattcctcagccc cttctactaactcccatcaagggagcagccttctcctctcccccccttag agtgccactgccgccttcatctttaggacttcaaagaaccacctagaaaa attgtcccggcaccattttccaggattcaggaaagtagttgattcacttg cacccacactgcctggggtcccagctcgccccccaagcctgagccacacc taaccagcttcacctggacaccaacacacggttggtccctcagtagccag ggaagacccttcaaaggaccagaaatacatggtttcatttcaaggagtct ttcccctctaaatgtttcttctttgtttgttgttagtggtgggagagttg ttttg	gaattcatacctggtagtggagacctgatctaacccccatggctcagagg acataggccctagtgtggaacttactgctatggttttactgaatggacat gctgtcaaactgccttgtaaatatatatgttgatactgatagatctgctg tcaaccttggtcagggaaccttctttctgcagtgggcagcagtgagtaca gagactcagaactggtcatgtgataagaagtgactgttgagtgcttaggc ctacatgggacatctataccaaacccctaaggctcagtgaaaattgagga aaagggggttgaaaaaagatgtgaaagtagaaggatgaatggaaagaaat actatgaaaagtattgaggacatgacctggccattgtcctcatcacatca ctgcagttacggccacctgcacaagatctgttcaagattaagccaacaag atcagtcaacattccagtaggtgacactaattggattggatttaggggaa agaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag aagaagaagaagaagaaga
quality values	Open. Hide. 62 41 38 27 62 62 62 41 33 54 62 62 62 49 62 62 62 62 44 39 62 59 44 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 59 59 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 54 62 62 62 62 62 62 62 62 46 62 62 62 62 62 49 54 62 49 62 62 62 62 62 62 62 62 46 62 62 54 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 46 62 46 46 56 62 62 62 46 62 48 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 49 52 54 54 58 54 58 58 54 47 46 58 54 58 58 58 54 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 48 54 58 41 54 54 54 49 52 49 38 43 52 52 58 52 58 58 58 58 54 58 58 54 48 58 54 58 50 50 47 47 47 49 54 51 58 51 48 49 49 47 50 54 49 49 50 49 58 50 52 52 48 38 39 58 49 49 52 50 49 58 51 58 49 51 40 51 54 49 51 50 51 49 48 41 43 49 49 48 51 46 58 36 49 54 25 46 50 51 54 58 50 54 49 47 58 50 54 52 34 53 53 51 58 40 50 50 54 49 29 58 54 53 31 58 58 50 58 49 33 44 50 47 51 49 49 37 58 58 41 41 42 50 54 54 39 42 49 50 44 44 34 29 40 49 38 53 54 54 51 42 47 37 37 44 21 17 42 37 33 49 54 40 54 49 38 39 38 30 54 47 52 37 25 44 38 32 38 49 51 42 37 37 39 49 51 37 47 39 52 40 53 51 44 35 33 54 54 54 34 28 51 34 34 24 40 40 32 39 31 40 40 25 28 40 32 41 39 29 41 32 41 52 22 34 47 34 34 40 32 39 45 46 25 11 25 31 35 32 51 51 31 31 41 45 32 42 46 26 21 25 34 30 31 42 31 31 32 30 30 31 35 31 32 34 38 36 31 40 33 37 31 36 13 26 37 28 27 26 28 38 46 46 38 31 23 33 8 40 31 31 25 26 35 46 30 26 36 27 6 26 31 31 44 47 12 22 25 18 14 28 32 35 26 48 32 33 16 31 47 33 31 31 22 34 36 33 22 31 36 31 47 23 26 46 44 29 31 34 35 21 18 14 26 38 27 44 24 31 27 22 31 26 44 26 36 20 44 22 12 9 18 36 16 23 37 26 26 33 34 30 35 43 24 20 9 26 16 20 14 14 15 34 22 12 6	Open. Hide. 62 47 51 44 62 59 51 62 62 62 62 59 62 49 28 38 56 62 62 62 62 62 59 43 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 62 62 62 59 59 62 62 62 62 62 62 54 42 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 49 54 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 59 62 62 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 58 58 58 54 58 58 58 58 58 47 39 54 54 58 58 45 58 58 58 45 47 54 54 58 54 58 58 58 58 58 54 54 58 58 58 45 54 58 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 54 58 58 44 58 58 58 58 58 58 58 58 49 58 58 53 58 58 54 58 58 48 49 41 47 58 58 51 58 58 54 58 58 58 58 58 58 58 51 58 58 58 58 58 54 44 58 58 51 58 54 52 58 54 48 58 54 51 58 58 51 58

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_11538840_11539795
seq2: B6Ng01-187E22.b_43_997

seq1  GAATTCTCAAAAAAGAAAATTCAAATTGAATAAGAGGGAGAATTTCCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAAAAAGAAAATTCAAATTGAATAAGAGGGAGAATTTCCCGA  50

seq1  TTGCATTTAAAATTAAGCCTATTCTTTAAAGCTCTCGAATATTCTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTAAAATTAAGCCTATTCTTTAAAGCTCTCGAATATTCTGTGAT  100

seq1  CAAGTGGCCAGAACATTTTTAAAGTAGGGCACAGCATCAGTGCAACCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGCCAGAACATTTTTAAAGTAGGGCACAGCATCAGTGCAACCAAC  150

seq1  CTTTAATATAGGAAGGGTTTGGTAACTCTTGTTTTCTCTGTAGTTGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATATAGGAAGGGTTTGGTAACTCTTGTTTTCTCTGTAGTTGATAG  200

seq1  CCCAGACATAGTCCAGTGGTGGCCATATGGTCTGGACACCACCCTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACATAGTCCAGTGGTGGCCATATGGTCTGGACACCACCCTAGAAA  250

seq1  CCCTTAGGAACTGATTGGCACCCCAAAATACATTCAAGATCCTGAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGGAACTGATTGGCACCCCAAAATACATTCAAGATCCTGAAAGAA  300

seq1  CAGGACCCTTAACTAGCAATTAACTAACTCATTGCTATTGCAGCCAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCTTAACTAGCAATTAACTAACTCATTGCTATTGCAGCCAACTA  350

seq1  TTTTCTCCACCAGGACACTATGAGCTTTGGGGGAGGAAATGCTTTTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCACCAGGACACTATGAGCTTTGGGGGAGGAAATGCTTTTCACC  400

seq1  ACACAGGTTTATTTCTGGCATTGTGACCTCCAAACACACTCAGTGAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTTTATTTCTGGCATTGTGACCTCCAAACACACTCAGTGAGGAC  450

seq1  AACGCACCTTGAGTGTTTCAAGTGGGGATCTCCCCCCACCCCCGAGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCACCTTGAGTGTTTCAAGTGGGGATCTCCCCCCACCCCCGAGTCTC  500

seq1  TGTCAGGAAGATGGAAGGGTCTGGCGCTTGTCCCCACAAGCCCAGTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGAAGATGGAAGGGTCTGGCGCTTGTCCCCACAAGCCCAGTTTGA  550

seq1  AATGGTACCTGAGTGTCAGCCCACAGCACCGCCACCTCATTCCTCAGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTACCTGAGTGTCAGCCCACAGCACCGCCACCTCATTCCTCAGCCC  600

seq1  CTTCTACTAACTCCCATCAAGGGAGCAGCCTTCTCCTCTCCCCCCCTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACTAACTCCCATCAAGGGAGCAGCCTTCTCCTCTCCCCCCCTTAG  650

seq1  AGTGCCACTGCCGCCTTCATCTTTAGGACTTCAAAGAACCACCTAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACTGCCGCCTTCATCTTTAGGACTTCAAAGAACCACCTAGAAAA  700

seq1  ATTGTCCCGGCACCATTTTCCAGGATTCAGGAAAGTAGTTGATTCACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCCCGGCACCATTTTCCAGGATTCAGGAAAGTAGTTGATTCACTTG  750

seq1  CACCCACACTGCCTGGGGTCCCAGCTCGCCCCCCAAGCCTGAGCCACACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACTGCCTGGGGTCCCAGCTCGCCCCCCAAGCCTGAGCCACACC  800

seq1  TAACCAGCTTCACCTGGACACCAACACACGGTTGGTCCCTCAGTAGCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGCTTCACCTGGACACCAACACACGGTTGGTCCCTCAGTAGCCAG  850

seq1  GGAAGACCCTTCAAAGGACCAGAAATACATGGTTTCATTTCAAGGAGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACCCTTCAAAGGACCAGAAATACATGGTTTCATTTCAAGGAGTCT  900

seq1  TTCCCCTCTAAAATGTTTCTTCTTTGTTTGTTGTTAGTGGTGGGAGAGTT  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCT-AAATGTTTCTTCTTTGTTTGTTGTTAGTGGTGGGAGAGTT  949

seq1  GTTTTG  956
      ||||||
seq2  GTTTTG  955

seq1: chr2_97457603_97457681
seq2: B6Ng01-187E22.g_561_631 (reverse)

seq1  TCTTCTTTTTGTCTTTGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  50
      ||||||| |        |||||||||||||||||||||||||||||||||
seq2  TCTTCTTCT--------TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  42

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTT  79
      |||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTT  71

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information