BAC Information

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BAC

Clone NameB6Ng01-187L05
Chromosome2 (Build37)
Map Location 108,282,960 - 108,405,752
singlet/doubletdoublet
Overlap geneLOC100043078
Upstream genenone
Downstream geneLOC668790, LOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187L05.bB6Ng01-187L05.g
ACCGA012206GA012207
length9151,130
definitionB6Ng01-187L05.b B6Ng01-187L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,404,839 - 108,405,752)(108,282,960 - 108,284,100)
sequence
gaattcttttcaatgaaaatttcctaacataataaaaaaaaaaaactata
ttttgactttgtttaatgtctgactcggtttatataatggttagttttaa
atgtaagcttgacttagcctagagacagctgttaaggattctcaataagc
aattttgtagttcaggcaacctgtggacacatctgtgatttttgcttgct
tgcttgtttgtattgtttttgttctcattttgttttttgttttttgtttt
tgttttttgttttttgttttttttttgttgttgttgttgtttcaattatg
tggcttaaggtatgaagacttaccaactgtgaatatcactgtcatttggg
tagggggtcctggactctgcaagagcggagaatgtggcctgagcattaaa
acttaagcactctgctcttgactctaggtgtaatagaatgagctactttg
catatttgctcctttgagttcatctcagtgatggactgtaacctagattg
tggaaaaaagtaaacctttgtcgcttaagtaatttttgtcagaataattt
atcacagcatcaggttgaaactaagacaacgtaattttttctaagagtaa
gtttttgatatacttatctcttctaagatcttctatttttctctgatgat
tttgattttgtcaggccaatctttttccttcttaccatgtttttgttttt
ggattttttcctaaataatgaacttttaaaaaacgctgttttatattttt
tagctaacatttcctgtagattatgtttaagagactttaattttttcctt
tccaccctcacatcttacatttttttgtcagacattaaatttcttcataa
tactgctgatatatcttttgtactttactgctaattactatgatttattt
cttcatcactgtcaa

gaattccagaagtgaaacagcttcaaatttacttaagaagttctgcttct
tcttgttttagtgctccttaaactttagaaaacaactcccgggatcaaaa
ttggttgaccaccaatgctaaaattctgaagtgggccttgctgctttact
ttggcttctccaggtcccctaaccaggatccttaatgccaagatcaagag
tagaaaaagccctcctatgaacagagatacaacactaaatgacagaagac
atgtataatcttttccattcactttagttccaaactacaaactgtactct
gtgggagaaagaaatgaactctaaaaggaaagcaaatgatacagctttca
tagacgtgttggattacaaaaataaacaaacacaaaataagttctagtga
aaaatatgttttctagctatataatagtcactcatgttaattcatgatta
agaaagtaaagaagctagatagcataaactgggccaagaacctggaaatc
caacagcaaaaatacatttgttttcctttttcaaaatagtcttctatttt
attttttgctgtttgtctccttcaaagctcaatggctgtcttgagaaatc
ttgttttctataagcagagaaccaacttgttagctaatttaatttatctc
tatccaaatccttcatagcttagaatttgggtggttttttctccagggag
atagaggcaaacttcttcaagaagagtttgtgttaggaaaacattcagtg
tttcttataacaaagcattacacaaagaaaccagacttcagggtacatgc
acataccagcacttggaaaatctaagtcagatagataaccatcaactcaa
ccaaaggccagcataggtgacataatgtgtccacagccagccttagctac
aaggttacatcataacaaaccaagagaaaagaaagagacttcacaaagaa
agtggcatgaagtcagtgccaattgagtgtttttcagcaaaggttttcct
ttaagtttttattataatagcatgcatttattatgcatataggttggttt
tataactgattttatgcatgtcataatgtatctgatgaatcactcacatt
acacgctgttcatgtctgatctcgctgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108404839_108405752
seq2: B6Ng01-187L05.b_44_958 (reverse)

seq1  TGGACAGTGATGAAGAAAT-AATCCTAGT-ATTAGCAGTAAAGTAC-AAA  47
      | ||||||||||||||||| |||| |||| |||||||||||||||| |||
seq2  TTGACAGTGATGAAGAAATAAATCATAGTAATTAGCAGTAAAGTACAAAA  50

seq1  GATATATCAGCAGTTATTATGAAGAAATTTAATGTCTTGAC-AAAAAATG  96
      ||||||||||||| |||||||||||||||||||||| |||| ||||||||
seq2  GATATATCAGCAG-TATTATGAAGAAATTTAATGTC-TGACAAAAAAATG  98

seq1  TAAGATGTGAGGGTTGAAAAGGAAAAAATTAAAGTCTCTTAAACATAATC  146
      ||||||||||||| || |||||||||||||||||||||||||||||||||
seq2  TAAGATGTGAGGG-TGGAAAGGAAAAAATTAAAGTCTCTTAAACATAATC  147

seq1  TACAGGAAATGTTAGCTAAAAAATATAAAACAGCGTTTTTTAAAAGTTCA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAATGTTAGCTAAAAAATATAAAACAGCGTTTTTTAAAAGTTCA  197

seq1  TTATTTAGGAAAAAATCCAAAAACAAAAACATGGTAAGAAGGAAAAAGAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGGAAAAAATCCAAAAACAAAAACATGGTAAGAAGGAAAAAGAT  247

seq1  TGGCCTGACAAAATCAAAATCATCAGAGAAAAATAGAAGATCTTAGAAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGACAAAATCAAAATCATCAGAGAAAAATAGAAGATCTTAGAAGA  297

seq1  GATAAGTATATCAAAAACTTACTCTTAGAAAAAATTACGTTGTCTTAGTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGTATATCAAAAACTTACTCTTAGAAAAAATTACGTTGTCTTAGTT  347

seq1  TCAACCTGATGCTGTGATAAATTATTCTGACAAAAATTACTTAAGCGACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTGATGCTGTGATAAATTATTCTGACAAAAATTACTTAAGCGACA  397

seq1  AAGGTTTACTTTTTTCCACAATCTAGGTTACAGTCCATCACTGAGATGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTACTTTTTTCCACAATCTAGGTTACAGTCCATCACTGAGATGAA  447

seq1  CTCAAAGGAGCAAATATGCAAAGTAGCTCATTCTATTACACCTAGAGTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGAGCAAATATGCAAAGTAGCTCATTCTATTACACCTAGAGTCA  497

seq1  AGAGCAGAGTGCTTAAGTTTTAATGCTCAGGCCACATTCTCCGCTCTTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGTGCTTAAGTTTTAATGCTCAGGCCACATTCTCCGCTCTTGC  547

seq1  AGAGTCCAGGACCCCCTACCCAAATGACAGTGATATTCACAGTTGGTAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCAGGACCCCCTACCCAAATGACAGTGATATTCACAGTTGGTAAG  597

seq1  TCTTCATACCTTAAGCCACATAATTGAAACAACAACAACAACAAAAAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATACCTTAAGCCACATAATTGAAACAACAACAACAACAAAAAAAA  647

seq1  AACAAAAAACAAAAAACAAAAACAAAAAACAAAAAACAAAATGAGAACAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAACAAAAAACAAAAACAAAAAACAAAAAACAAAATGAGAACAA  697

seq1  AAACAATACAAACAAGCAAGCAAGCAAAAATCACAGATGTGTCCACAGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATACAAACAAGCAAGCAAGCAAAAATCACAGATGTGTCCACAGGT  747

seq1  TGCCTGAACTACAAAATTGCTTATTGAGAATCCTTAACAGCTGTCTCTAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAACTACAAAATTGCTTATTGAGAATCCTTAACAGCTGTCTCTAG  797

seq1  GCTAAGTCAAGCTTACATTTAAAACTAACCATTATATAAACCGAGTCAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTCAAGCTTACATTTAAAACTAACCATTATATAAACCGAGTCAGA  847

seq1  CATTAAACAAAGTCAAAATATAGTTTTTTTTTTTTATTATGTTAGGAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAACAAAGTCAAAATATAGTTTTTTTTTTTTATTATGTTAGGAAAT  897

seq1  TTTCATTGAAAAGAATTC  914
      ||||||||||||||||||
seq2  TTTCATTGAAAAGAATTC  915


seq1: chr2_108282960_108284100
seq2: B6Ng01-187L05.g_64_1193

seq1  GAATTCCAGAAGTGAAACAGCTTCAAATTTACTTAAGAAGTTCTGCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGTGAAACAGCTTCAAATTTACTTAAGAAGTTCTGCTTCT  50

seq1  TCTTGTTTTAGTGCTCCTTAAACTTTAGAAAACAACTCCCGGGATCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTTAGTGCTCCTTAAACTTTAGAAAACAACTCCCGGGATCAAAA  100

seq1  TTGGTTGACCACCAATGCTAAAATTCTGAAGTGGGCCTTGCTGCTTTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGACCACCAATGCTAAAATTCTGAAGTGGGCCTTGCTGCTTTACT  150

seq1  TTGGCTTCTCCAGGTCCCCTAACCAGGATCCTTAATGCCAAGATCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTCTCCAGGTCCCCTAACCAGGATCCTTAATGCCAAGATCAAGAG  200

seq1  TAGAAAAAGCCCTCCTATGAACAGAGATACAACACTAAATGACAGAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAGCCCTCCTATGAACAGAGATACAACACTAAATGACAGAAGAC  250

seq1  ATGTATAATCTTTTCCATTCACTTTAGTTCCAAACTACAAACTGTACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATAATCTTTTCCATTCACTTTAGTTCCAAACTACAAACTGTACTCT  300

seq1  GTGGGAGAAAGAAATGAACTCTAAAAGGAAAGCAAATGATACAGCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGAAAGAAATGAACTCTAAAAGGAAAGCAAATGATACAGCTTTCA  350

seq1  TAGACGTGTTGGATTACAAAAATAAACAAACACAAAATAAGTTCTAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGTGTTGGATTACAAAAATAAACAAACACAAAATAAGTTCTAGTGA  400

seq1  AAAATATGTTTTCTAGCTATATAATAGTCACTCATGTTAATTCATGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTTTTCTAGCTATATAATAGTCACTCATGTTAATTCATGATTA  450

seq1  AGAAAGTAAAGAAGCTAGATAGCATAAACTGGGCCAAGAACCTGGAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTAAAGAAGCTAGATAGCATAAACTGGGCCAAGAACCTGGAAATC  500

seq1  CAACAGCAAAAATACATTTGTTTTCCTTTTTCAAAATAGTCTTCTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCAAAAATACATTTGTTTTCCTTTTTCAAAATAGTCTTCTATTTT  550

seq1  ATTTTTTGCTGTTTGTCTCCTTCAAAGCTCAATGGCTGTCTTGAGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGCTGTTTGTCTCCTTCAAAGCTCAATGGCTGTCTTGAGAAATC  600

seq1  TTGTTTTCTATAAGCAGAGAACCAACTTGTTAGCTAATTTAATTTATCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTATAAGCAGAGAACCAACTTGTTAGCTAATTTAATTTATCTC  650

seq1  TATCCAAATCCTTCATAGCTTAGAATTTGGGTGGTTTTTTCTCCAGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAATCCTTCATAGCTTAGAATTTGGGTGGTTTTTTCTCCAGGGAG  700

seq1  ATAGAGGCAAACTTCTTCAAGAAGAGTTTGTGTTAGGAAAACATTCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGCAAACTTCTTCAAGAAGAGTTTGTGTTAGGAAAACATTCAGTG  750

seq1  TTTCTTATAACAAAGCATTACACAAAGAAACCAGACTTCAGGGTACATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATAACAAAGCATTACACAAAGAAACCAGACTTCAGGGTACATGC  800

seq1  ACATACCAGCACTTGGAAAATCTAAGTCAGATAGATAACCATCAACTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCAGCACTTGGAAAATCTAAGTCAGATAGATAACCATCAACTCAA  850

seq1  CC-AAGGCCAGCATAGGTGACATAATGTGTCCACAGCCAGCCTTAGCTAC  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGCCAGCATAGGTGACATAATGTGTCCACAGCCAGCCTTAGCTAC  900

seq1  AAGGGTACATCATAACAAACCAAGAGAAAAGAAAGAGAACTTCACAAAGA  949
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGGTTACATCATAACAAACCAAGAGAAAAGAAAGAG-ACTTCACAAAGA  949

seq1  AAGTGGCATGAAGTCAGTGCCCAAATTGAGTG-TTTTCAGCAAAAGGTTT  998
      |||||||||||||||||||||  ||||||||| ||||||||||| | |||
seq2  AAGTGGCATGAAGTCAGTGCC--AATTGAGTGTTTTTCAGCAAAGGTTTT  997

seq1  TCTTTAAGTTTTTAATTATTAATAGCATGCATTTATTATGCATAATAGTT  1048
       |||||||||||| |||| |||||||||||||||||||||||||   |||
seq2  CCTTTAAGTTTTT-ATTA-TAATAGCATGCATTTATTATGCATATAGGTT  1045

seq1  GGTTTTAT-ACTGATTTTTAATGCATGTCTATAATGTATTCTGATGGTAT  1097
      |||||||| |||||||||  ||||||||| |||||||| |||||||  | 
seq2  GGTTTTATAACTGATTTT--ATGCATGTC-ATAATGTA-TCTGATG--AA  1089

seq1  TCACTCCACATTACACGCTTGTCCATGTCCTGCTCTCGCTGACA  1141
      ||||| |||||||||||| ||| ||||| ||| |||||||||||
seq2  TCACT-CACATTACACGC-TGTTCATGT-CTGATCTCGCTGACA  1130


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