BAC Information

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BAC

Clone NameB6Ng01-188C09
Chromosome2 (Build37)
Map Location 48,037,443 - 48,038,627
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383691, LOC100041457, LOC383692, Acvr2a, Orc4l, LOC100041508
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188C09.bB6Ng01-188C09.g
ACCGA012531GA012532
length1,2291,174
definitionB6Ng01-188C09.b B6Ng01-188C09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctattgagaaggtgtgtttccctaatttctttctcagccctgtt
tattctttgtgtagagaaaggccattgaccttgtttgagttattttatat
ccagctacttcaccggagcctgtttatcaggttaggagttctctgttggg
aattttaggtccacttataatataaccattcatatccatctggcaaggga
tatatttggactccctttccaattggaatcccctggatcgctttggtggt
gcctgaatgggcactctgtggcatgcata
gaattcattcttttatgattaggcaatgtggagtcaaaagatgtaataga
gtctggggtttaagtgtccaagaatgcagaaaaccatgaagtgaatgaag
aggcaaatactcttgccagtacatgccagtactcttgtatggaaatagtt
aggctaagtaaaatctacctgttttaaataaggagcaagctcacttgcta
gccagaggttgccaacaggacgaatttcagcacttacattacttacatta
gtctaaggatttctgagtttgcaattgaagaatgaaaagttggaaagaag
gcagacatttcaactcatcagttatttatacagatgacaggtgatctcca
aaactgcttgtcttcttgccctgtgggaaggctgaagctaagtcatgcat
ccctgccaatgagccacaaatcacctgctgacaggaaaatgtaggtcacc
tacctggtcgttttgaaaggatacacaactacaaccatgaaatattcgtg
ttattgactgaacttgcctttggttgtgttggcattccagagatgctgga
ccaggcagcggtatatttgaaataagaagttgggttcactagttgagagg
tttctctgagacagcaaacagccgtaaggaactttttaaatgagtgattg
tcttagaagcattatcctgtaggacaaaactctgaactgtatttctgcct
gaacagagatcacaagatgggtttaaatgttctgaggttgagtcaaggta
cagatattttataagatatccctcaaattactgggtagcaccctgtcact
tgtgtgtcttgcttaagtatctagcatgagcaatgttgaatagttccaaa
acaggacattctaagatttttaagcactgaagcaggtatctagaagttac
aaaactgggatttggataatcagaatcttcaactattatataaaaaattg
aagctggtagctagaataagcaacaagagagcaactatgaacaacttgag
ttcagacagaaagggataaaggagccaagttgagtaggctaagtatagct
acggggtcagtggagagtgcagaccaccagagatggctctatgaggacat
tccagcattccctgcctgtgcgtagaagcagtaatgaattggtctggacc
tccgaagttcaagaactttcacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_48037443_48038627
seq2: B6Ng01-188C09.g_67_1240 (reverse)

seq1  TAGTG-AAGTCTTTGAACTTCTGAAGTTCAGACCATATCATTAACTTTGC  49
      ||||| ||||  ||||||||| || || |||||||  ||||||    |||
seq2  TAGTGAAAGTTCTTGAACTTCGGAGGTCCAGACCAATTCATTA---CTGC  47

seq1  TGTCTACGCAACAGGCAGGGGAAATGCTGGGAATGTCCTCATAGAGCCCA  99
      | ||||||| ||||||||||  |||||| ||||||||||||||||| |||
seq2  T-TCTACGC-ACAGGCAGGG--AATGCT-GGAATGTCCTCATAGAG-CCA  91

seq1  TCTCTGTGTGTCTGCACTCTTCCCACTGACCCCGTTAGCTATACTTAGCC  149
      ||||||   |||||||||||  |||||||||||| |||||||||||||||
seq2  TCTCTGGTGGTCTGCACTCT--CCACTGACCCCG-TAGCTATACTTAGCC  138

seq1  TACTCAACTTGGCTTCCTTTATCCCTTTCTGTCTGAACTC-AGTTGTTCA  198
      ||||||||||||| |||||||||||||||||||||||||| |||||||||
seq2  TACTCAACTTGGC-TCCTTTATCCCTTTCTGTCTGAACTCAAGTTGTTCA  187

seq1  TAGTTGCTCTCTTGTTGCTTATTCTAGCTACCAGCTTCAATTTTTTAATA  248
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAGTTGCTCTCTTGTTGCTTATTCTAGCTACCAGCTTCAATTTTTT-ATA  236

seq1  TAATAGTTGAAGATTCTGATTATCCAAAT-CCAGTTTTGTAACTTCTAGA  297
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TAATAGTTGAAGATTCTGATTATCCAAATCCCAGTTTTGTAACTTCTAGA  286

seq1  TACCTGCTTCAGTGCTTAAAAATCTTAGAATGTCCTGTTTTGGAACTATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTTCAGTGCTTAAAAATCTTAGAATGTCCTGTTTTGGAACTATT  336

seq1  CAACATTGCTCATGCTAGATACTTAAGCAAGACACACAAGTGACAGGGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGCTCATGCTAGATACTTAAGCAAGACACACAAGTGACAGGGTG  386

seq1  CTACCCAGTAATTTGAGGGATATCTTATAAAATATCTGTACCTTGACTCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAGTAATTTGAGGGATATCTTATAAAATATCTGTACCTTGACTCA  436

seq1  ACCTCAGAACATTTAAACCCATCTTGTGATCTCTGTTCAGGCAGAAATAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAACATTTAAACCCATCTTGTGATCTCTGTTCAGGCAGAAATAC  486

seq1  AGTTCAGAGTTTTGTCCTACAGGATAATGCTTCTAAGACAATCACTCATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAGTTTTGTCCTACAGGATAATGCTTCTAAGACAATCACTCATT  536

seq1  TAAAAAGTTCCTTACGGCTGTTTGCTGTCTCAGAGAAACCTCTCAACTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTTCCTTACGGCTGTTTGCTGTCTCAGAGAAACCTCTCAACTAG  586

seq1  TGAACCCAACTTCTTATTTCAAATATACCGCTGCCTGGTCCAGCATCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAACTTCTTATTTCAAATATACCGCTGCCTGGTCCAGCATCTCT  636

seq1  GGAATGCCAACACAACCAAAGGCAAGTTCAGTCAATAACACGAATATTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCAACACAACCAAAGGCAAGTTCAGTCAATAACACGAATATTTC  686

seq1  ATGGTTGTAGTTGTGTATCCTTTCAAAACGACCAGGTAGGTGACCTACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTAGTTGTGTATCCTTTCAAAACGACCAGGTAGGTGACCTACAT  736

seq1  TTTCCTGTCAGCAGGTGATTTGTGGCTCATTGGCAGGGATGCATGACTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTCAGCAGGTGATTTGTGGCTCATTGGCAGGGATGCATGACTTA  786

seq1  GCTTCAGCCTTCCCACAGGGCAAGAAGACAAGCAGTTTTGGAGATCACCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGCCTTCCCACAGGGCAAGAAGACAAGCAGTTTTGGAGATCACCT  836

seq1  GTCATCTGTATAAATAACTGATGAGTTGAAATGTCTGCCTTCTTTCCAAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTGTATAAATAACTGATGAGTTGAAATGTCTGCCTTCTTTCCAAC  886

seq1  TTTTCATTCTTCAATTGCAAACTCAGAAATCCTTAGACTAATGTAAGTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTCTTCAATTGCAAACTCAGAAATCCTTAGACTAATGTAAGTAA  936

seq1  TGTAAGTGCTGAAATTCGTCCTGTTGGCAACCTCTGGCTAGCAAGTGAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGCTGAAATTCGTCCTGTTGGCAACCTCTGGCTAGCAAGTGAGC  986

seq1  TTGCTCCTTATTTAAAACAGGTAGATTTTACTTAGCCTAACTATTTCCAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCTTATTTAAAACAGGTAGATTTTACTTAGCCTAACTATTTCCAT  1036

seq1  ACAAGAGTACTGGCATGTACTGGCAAGAGTATTTGCCTCTTCATTCACTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTACTGGCATGTACTGGCAAGAGTATTTGCCTCTTCATTCACTT  1086

seq1  CATGGTTTTCTGCATTCTTGGACACTTAAACCCCAGACTCTATTACATCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTTTCTGCATTCTTGGACACTTAAACCCCAGACTCTATTACATCT  1136

seq1  TTTGACTCCACATTGCCTAATCATAAAAGAATGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCCACATTGCCTAATCATAAAAGAATGAATTC  1174