BAC Information

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BAC

Clone NameB6Ng01-188J13
Chromosome2 (Build37)
Map Location 84,089,964 - 84,090,369
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545429, Ppia-ps2_981.1, LOC100040818, LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725
Downstream geneCalcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188J13.bB6Ng01-188J13.g
ACCGA012857GA012858
length249400
definitionB6Ng01-188J13.b B6Ng01-188J13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctctgcttggcttcatactagctttggcaatgtgttctaatcttctggcc
ccttctcatcctctggttcattctgccttcacctgtgtctagcttgcttt
ctctgcaacttattgctgtaaaactgtcccggtaaaactgccacacatat
actcctcaccaccttttttacaatacacagtacaaaaccaaacctcagca
ccagctccaccaaacctcccttcccttcccttcccttcccttaccttac
tgttagctgtgcaaaatgcagagaatggtgcaaagaatgttctcaaacta
tttcaaacaaattatatcaaagaggaaactgtagaaatgagaaccccaca
gggaaatctccagctggggtatttcctactattgtcaggattcgctggcc
ctcttgaggaattccagactagtcacaatgttacgttgacccgtgttcat
aagaacacagttaaaagtaatggattgtggtttaagggacctttgtagtg
tcatttacagtaacaaccatttttccctaagaaggtttattagaaaatgt
tgggttttttttttaaactttgtatgttcattagattagggaaatgcaac
tggtatatttgttttcttgatagcactggggagaggaagggagggaggga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_84089964_84090369
seq2: B6Ng01-188J13.g_68_473 (reverse)

seq1  TCCCTCCCTCCCTTCCTCTCCCCAGTGCTATCAAGAAAACAAATATACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCCCTTCCTCTCCCCAGTGCTATCAAGAAAACAAATATACCA  50

seq1  GTTGCATTTCCCTAATCTAATGAACATACAAAGTTTAAAAAAAAAACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATTTCCCTAATCTAATGAACATACAAAGTTTAAAAAAAAAACCCA  100

seq1  ACATTTTCTAATAAACCTTCTTAGGGAAAAATGGTTGTTACTGTAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTAATAAACCTTCTTAGGGAAAAATGGTTGTTACTGTAAATGA  150

seq1  CACTACAAAGGTCCCTTAAACCACAATCCATTACTTTTAACTGTGTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAAAGGTCCCTTAAACCACAATCCATTACTTTTAACTGTGTTCTT  200

seq1  ATGAACACGGGTCAACGTAACATTGTGACTAGTCTGGAATTCCTCAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACACGGGTCAACGTAACATTGTGACTAGTCTGGAATTCCTCAAGAG  250

seq1  GGCCAGCGAATCCTGACAATAGTAGGAAATACCCCAGCTGGAGATTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCGAATCCTGACAATAGTAGGAAATACCCCAGCTGGAGATTTCCC  300

seq1  TGTGGGGTTCTCATTTCTACAGTTTCCTCTTTGATATAATTTGTTTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTTCTCATTTCTACAGTTTCCTCTTTGATATAATTTGTTTGAAA  350

seq1  TAGTTTGAGAACATTCTTTGCACCATTCTCTGCATTTTGCACAGCTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGAGAACATTCTTTGCACCATTCTCTGCATTTTGCACAGCTAACA  400

seq1  GAATTC  406
      ||||||
seq2  GAATTC  406