BAC Information

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BAC

Clone NameB6Ng01-189E10
Chromosome2 (Build37)
Map Location 119,734,825 - 119,807,406
singlet/doubletdoublet
Overlap geneMga, Mapkbp1
Upstream geneBahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403
Downstream genePla2g4b, Spnb5, Ehd4, Pla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39, Tmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189E10.bB6Ng01-189E10.g
ACCGA013342GA013343
length1,071816
definitionB6Ng01-189E10.b B6Ng01-189E10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,806,330 - 119,807,406)(119,734,825 - 119,735,631)
sequence
gaattctttccactgatctttctagggaagggatgggaaagggtgagtgc
gcctgtggtcacaatcgtttgggtttctgtttctgagactgaggaccgtg
tagcccaggctggattctctctggtcttgaagacaggatgatcttgaact
ccctacgtcctgtccacccccacttcccaagtgccgggattacagatctg
cgccactccaccaaactctgataaaaatgtgtatctaaaacaaaacagaa
caaaaataaaatgaaacaacacatcccctccaccaatgggctggaaagat
agctcagcagttaagagcactggttgttcttccagaggacccaggttcaa
ttcccagcacctacacagcagctcacagctgtctgtaaatccagcttcag
ggggtccaacaccctcacacggatatttatgctggaaaaacaccaattca
aataaaacaaaaataaataaatcattttaaaaaaccaaacctcaccttct
ccaacctgtacactgtacactggctatggaaattctagacgttcttttga
agatgaagattcccttgggagggatacagaataatgattacatttgggct
ttggaactatgtaagtcaaggtttgaactccagctcagctacctagtatc
catctgaagtgtcatcagtttccagcatgtatgatggaagcaattattca
tgatataccattatgcttcataaattcttctacatgttgcatttcatata
tttgtaggagttttgtttctctgttacatgccagcacctctaagggacca
ggcgaacatataaggagatggagcaagcaccgctgaagtgaggcagctct
cagacggtgagatggtaacacctcatcaaggaaaaggagtgctcacaccc
caaccagaggggaagctggctcccgggacagctcagtttattagaccaag
gccttagttccagcccggagcaccaataaaaagcacatttccaaagaaca
ccaactctctctcacgagcctctaaagagcatttgacaaagtgtgagtgt
gtgtgtgtgttggggggggag
gaattcaataggtccacttgactgggattaaaagcatgaacatctatctg
atctaatttttattgaggtagaattttgttagctcagtggagactgattt
ggtgcttctgatccggttcttttgcttctgtgtatcaagagctgtgatta
taggtgttgcactgctatgcctaattcttaacaataattttacagggttt
ttgtatttttgttatgtagttttggctggcctggaacccatagatatatc
tacctgcttctgtctctcaagttacaaggattaaaagtgcacatcaccga
acctgcctcactgagttttatgggagagggtgatgatggtagtactgggg
attgaatttaggtcctcccacattcttggcatgcatgcagacactaaggt
atatatcctttggtcgattctcactgagaaaaataggctaaaatctatac
tataattacagaattttgttctattactgtttgagataggatcttacttt
gtagttctgactcttctggaatttgtatagtgttaggcttacctcaaact
ttcagagattctcctttctctgtctctgagtattgagatttagaggcttt
ctgccagtttgtatgaacttctcttgttctcttttcaaaattgtcaaaat
tgtctcagaaaaattggttttccttttcctttccctttccctttcccttt
ccctttccctttccctttcccttttccttttcctttttccttttcctttt
tcctttttttctagacagggtttctctatgtagctcttggttgtcctgga
actcattctagacaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_119806330_119807406
seq2: B6Ng01-189E10.b_49_1119 (reverse)

seq1  CCCCCCCCCCCACACACACACACACTCACACTTTGTCAAATGCTCTTTTA  50
      | |||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  CTCCCCCCCCAACACACACACACACTCACACTTTGTCAAATGCTC-TTTA  49

seq1  GAGGCTTCGTGAGAAGAGAGGTTGGTGTTCTTTGGAAATGTTGCTTTTTT  100
      ||||| ||||||| ||||| |||||||||||||||||||| ||| |||||
seq2  GAGGC-TCGTGAG-AGAGA-GTTGGTGTTCTTTGGAAATG-TGC-TTTTT  94

seq1  ATTGGTGCTCC-GGCTGGAACCTAAGGCCTTGGTCTAATAAACTGAGCTG  149
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  ATTGGTGCTCCGGGCTGGAA-CTAAGGCCTTGGTCTAATAAACTGAGCTG  143

seq1  TCCCGGGAGCCAGCTTCCCCTCTGGTTGGGGTGTGAGCACTCCTTTTCCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGAGCCAGCTTCCCCTCTGGTTGGGGTGTGAGCACTCCTTTTCCT  193

seq1  TGATGAGGTGTTACCATCTCACCGTCTGAGAGCTGCCTCACTTCAGCGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGTGTTACCATCTCACCGTCTGAGAGCTGCCTCACTTCAGCGGT  243

seq1  GCTTGCTCCATCTCCTTATATGTTCGCCTGGTCCCTTAGAGGTGCTGGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCCATCTCCTTATATGTTCGCCTGGTCCCTTAGAGGTGCTGGCA  293

seq1  TGTAACAGAGAAACAAAACTCCTACAAATATATGAAATGCAACATGTAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGAGAAACAAAACTCCTACAAATATATGAAATGCAACATGTAGA  343

seq1  AGAATTTATGAAGCATAATGGTATATCATGAATAATTGCTTCCATCATAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTATGAAGCATAATGGTATATCATGAATAATTGCTTCCATCATAC  393

seq1  ATGCTGGAAACTGATGACACTTCAGATGGATACTAGGTAGCTGAGCTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGAAACTGATGACACTTCAGATGGATACTAGGTAGCTGAGCTGGA  443

seq1  GTTCAAACCTTGACTTACATAGTTCCAAAGCCCAAATGTAATCATTATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAACCTTGACTTACATAGTTCCAAAGCCCAAATGTAATCATTATTC  493

seq1  TGTATCCCTCCCAAGGGAATCTTCATCTTCAAAAGAACGTCTAGAATTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCCTCCCAAGGGAATCTTCATCTTCAAAAGAACGTCTAGAATTTC  543

seq1  CATAGCCAGTGTACAGTGTACAGGTTGGAGAAGGTGAGGTTTGGTTTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCAGTGTACAGTGTACAGGTTGGAGAAGGTGAGGTTTGGTTTTTT  593

seq1  AAAATGATTTATTTATTTTTGTTTTATTTGAATTGGTGTTTTTCCAGCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATTTATTTATTTTTGTTTTATTTGAATTGGTGTTTTTCCAGCAT  643

seq1  AAATATCCGTGTGAGGGTGTTGGACCCCCTGAAGCTGGATTTACAGACAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCGTGTGAGGGTGTTGGACCCCCTGAAGCTGGATTTACAGACAG  693

seq1  CTGTGAGCTGCTGTGTAGGTGCTGGGAATTGAACCTGGGTCCTCTGGAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCTGCTGTGTAGGTGCTGGGAATTGAACCTGGGTCCTCTGGAAG  743

seq1  AACAACCAGTGCTCTTAACTGCTGAGCTATCTTTCCAGCCCATTGGTGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCAGTGCTCTTAACTGCTGAGCTATCTTTCCAGCCCATTGGTGGA  793

seq1  GGGGATGTGTTGTTTCATTTTATTTTTGTTCTGTTTTGTTTTAGATACAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGTGTTGTTTCATTTTATTTTTGTTCTGTTTTGTTTTAGATACAC  843

seq1  ATTTTTATCAGAGTTTGGTGGAGTGGCGCAGATCTGTAATCCCGGCACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCAGAGTTTGGTGGAGTGGCGCAGATCTGTAATCCCGGCACTT  893

seq1  GGGAAGTGGGGGTGGACAGGACGTAGGGAGTTCAAGATCATCCTGTCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTGGGGGTGGACAGGACGTAGGGAGTTCAAGATCATCCTGTCTTC  943

seq1  AAGACCAGAGAGAATCCAGCCTGGGCTACACGGTCCTCAGTCTCAGAAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGAGAGAATCCAGCCTGGGCTACACGGTCCTCAGTCTCAGAAAC  993

seq1  AGAAACCCAAACGATTGTGACCACAGGCGCACTCACCCTTTCCCATCCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCAAACGATTGTGACCACAGGCGCACTCACCCTTTCCCATCCCT  1043

seq1  TCCCTAGAAAGATCAGTGGAAAGAATTC  1077
      ||||||||||||||||||||||||||||
seq2  TCCCTAGAAAGATCAGTGGAAAGAATTC  1071

seq1: chr2_119734825_119735631
seq2: B6Ng01-189E10.g_65_880

seq1  GAATTCAATAGGTCCACTTGACTGGGATTAAAAGCATGAACATCTATCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGGTCCACTTGACTGGGATTAAAAGCATGAACATCTATCTG  50

seq1  ATCTAATTTTTATTGAGGTAGAATTTTGTTAGCTCAGTGGAGACTGATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTTTTATTGAGGTAGAATTTTGTTAGCTCAGTGGAGACTGATTT  100

seq1  GGTGCTTCTGATCCGGTTCTTTTGCTTCTGTGTATCAAGAGCTGTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTCTGATCCGGTTCTTTTGCTTCTGTGTATCAAGAGCTGTGATTA  150

seq1  TAGGTGTTGCACTGCTATGCCTAATTCTTAACAATAATTTTACAGGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTTGCACTGCTATGCCTAATTCTTAACAATAATTTTACAGGGTTT  200

seq1  TTGTATTTTTGTTATGTAGTTTTGGCTGGCCTGGAACCCATAGATATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTTGTTATGTAGTTTTGGCTGGCCTGGAACCCATAGATATATC  250

seq1  TACCTGCTTCTGTCTCTCAAGTTACAAGGATTAAAAGTGCACATCACCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTTCTGTCTCTCAAGTTACAAGGATTAAAAGTGCACATCACCGA  300

seq1  ACCTGCCTCACTGAGTTTTATGGGAGAGGGTGATGATGGTAGTACTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTCACTGAGTTTTATGGGAGAGGGTGATGATGGTAGTACTGGGG  350

seq1  ATTGAATTTAGGTCCTCCCACATTCTTGGCATGCATGCAGACACTAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTTAGGTCCTCCCACATTCTTGGCATGCATGCAGACACTAAGGT  400

seq1  ATATATCCTTTGGTCGATTCTCACTGAGAAAAATAGGCTAAAATCTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCTTTGGTCGATTCTCACTGAGAAAAATAGGCTAAAATCTATAC  450

seq1  TATAATTACAGAATTTTGTTCTATTACTGTTTGAGATAGGATCTTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTACAGAATTTTGTTCTATTACTGTTTGAGATAGGATCTTACTTT  500

seq1  GTAGTTCTGACTCTTCTGGAATTTGTATAGTGTTAGGCTTACCTCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTGACTCTTCTGGAATTTGTATAGTGTTAGGCTTACCTCAAACT  550

seq1  TTCAGAGATTCTCCTTTCTCTGTCTCTGAGTATTGAGATTTAGAGGC-TT  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCAGAGATTCTCCTTTCTCTGTCTCTGAGTATTGAGATTTAGAGGCTTT  600

seq1  CTGCCAGTTTGTATGAACTTCTCTTGTTCTCTTTTCAAAATTGTCAAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGTTTGTATGAACTTCTCTTGTTCTCTTTTCAAAATTGTCAAAAT  650

seq1  TGTCTCAGAAAAATTGGTTTTCCTTTTCCTTTCCCTTTCCCTTTCCCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGAAAAATTGGTTTTCCTTTTCCTTTCCCTTTCCCTTTCCCTTT  700

seq1  CCCTTTCCCTTTCCCTTTCCCTTTTCCTTTTCC-TTTTCCTTTTCCT---  745
      ||||||||||||||||||||||||||||||||| |||||||||||||   
seq2  CCCTTTCCCTTTCCCTTTCCCTTTTCCTTTTCCTTTTTCCTTTTCCTTTT  750

seq1  ---TTTTTTTCTAGACAGGGTTTCTCTATGTAGCTC-TGGCTGTCCTGGA  791
         ||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  TCCTTTTTTTCTAGACAGGGTTTCTCTATGTAGCTCTTGGTTGTCCTGGA  800

seq1  ACTCACTCTAGACCAG  807
      ||||| ||||||| ||
seq2  ACTCATTCTAGACAAG  816