BAC Information

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BAC

Clone NameB6Ng01-189G15
Chromosome2 (Build37)
Map Location 143,767,136 - 143,912,651
singlet/doubletdoublet
Overlap geneDstn, Rrbp1, 4930517K23Rik
Upstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534
Downstream geneLOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097, Csrp2bp, LOC100043552, 6330439K17Rik, Polr3f, Rbbp9, Sec23b, Gm561, Dtd1, 1700010M22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189G15.bB6Ng01-189G15.g
ACCGA013442GA013443
length1,180738
definitionB6Ng01-189G15.b B6Ng01-189G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,767,136 - 143,768,312)(143,911,915 - 143,912,651)
sequence
gaattctctctgtagaccagacaggccagccacttgtctctttcaagtgc
tgggattaaaggtgttctccaccaccacccagcttctactttacatgtgc
atataagcatcagtgtgcagattcattgacaattgacatgtgagtgcagg
tgctctcagagtccagggcaccgtagtcacagctggctcatttgtgtggt
tggaagtcatcctgtgtgtgagtgctggggactgatctgcggtcctctga
cgatcataagcacgcttaaaccattcggccatgtctctagcctgtatttt
tacaatgactggcctgcttttttgttgaagcaccaccttagtaacgtgtg
ttcacagactgaacaatggattgtatccagttactagctcacaaatcctt
cctcaatgcttactttcccttgtaccattcccctgcctcttcctgaaccc
cagtagtaactggtatcctggcttctgactgcatacagtagcggggctga
tttagacttgaacagatggagtcataacggaatgtccacttgtgtttctg
gttgctttcaggcagcattacatttgttgacggggtcagtattttgttgc
atgtgcttatccatgatttcttcccgcaatcggattctgttctggaaaac
tgtaaattagttttggtaccttagagaaaggaatacgctgctgcataatc
ctaaacagaatttgttcttctctctaggtataaagcatgagtatcaagca
aatgggccagaagacctcaatcggacctgtattgctgaaaagctaggtgg
ctcctttatttgtagcctttgaaggatcccctgtgtagaccgccagtcag
tgccacgagttgaaagcttccatactgaacactatccctttcactatata
agtaaagcaaatatattagccaggatctcactgaggaatttgtctgtcat
cttttagagtaaactaaaaattgtatagtgtctgcaaacactaccctacc
taaatccagcctcctaagtctcactggtgtgaaattaaactcttattggc
caaatgcctgtttcatgaagtgacttgttaaagttttgttaagctcagat
tttaataaacacagttccaaaaacagatccaggcagtttgactgagaact
ctactcttttgcctacctcagcatgttact
gaattccaggatattccagtcagaagttaggaggctgaatctctgaggcc
aatctcggtgggaaccatattttatagaccttatgggggagggcaaggca
ctggctgtgcggggtagggcaggggtgtgcgggctgcgggtgggagcggg
gcgtggacccggtgagggaggaatgcagtgtgagtttgtgattcagatga
gcgctgagcttgtttttttttttttttttttttttttggtgcagatttga
ccctgagaccattcattgtgggactttgttcatcgacttgtgggcacttt
aaaaacatgaccatattgggcttgggaatttgctcctcagctacagtaga
aagtccaggggcttgggcggaagtgtggtacaatggggaggctccacagg
gactccctgcggtgcctggctgggccagggaagggatttccctgcgtctg
ctgagacctgcctttccggtccccaggcctgtgtttgcagcacagcctct
tccagaggctactgccttccaaggactgtgggcagccgtccttgtccaca
aggccaggggagccagcacggggaggtcccagggagacggatgccctggt
gggttcccctccccgagaacccaggatagcatctgcaccccttccagaag
ccgacctttgttctcccgggtcacagactggcttatctggcagggtttgc
ctagcccaagtttcattaaggagcaggacaaacaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143767136_143768312
seq2: B6Ng01-189G15.b_44_1223

seq1  GAATTCTCTCTGTAGACCAGACAGGCCAGCCACTTGTCTCTTTCAAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAGACCAGACAGGCCAGCCACTTGTCTCTTTCAAGTGC  50

seq1  TGGGATTAAAGGTGTTCTCCACCACCACCCAGCTTCTACTTTACATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAAAGGTGTTCTCCACCACCACCCAGCTTCTACTTTACATGTGC  100

seq1  ATATAAGCATCAGTGTGCAGATTCATTGACAATTGACATGTGAGTGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCATCAGTGTGCAGATTCATTGACAATTGACATGTGAGTGCAGG  150

seq1  TGCTCTCAGAGTCCAGGGCACCGTAGTCACAGCTGGCTCATTTGTGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAGAGTCCAGGGCACCGTAGTCACAGCTGGCTCATTTGTGTGGT  200

seq1  TGGAAGTCATCCTGTGTGTGAGTGCTGGGGACTGATCTGCGGTCCTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCATCCTGTGTGTGAGTGCTGGGGACTGATCTGCGGTCCTCTGA  250

seq1  CGATCATAAGCACGCTTAAACCATTCGGCCATGTCTCTAGCCTGTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCATAAGCACGCTTAAACCATTCGGCCATGTCTCTAGCCTGTATTTT  300

seq1  TACAATGACTGGCCTGCTTTTTTGTTGAAGCACCACCTTAGTAACGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGACTGGCCTGCTTTTTTGTTGAAGCACCACCTTAGTAACGTGTG  350

seq1  TTCACAGACTGAACAATGGATTGTATCCAGTTACTAGCTCACAAATCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGACTGAACAATGGATTGTATCCAGTTACTAGCTCACAAATCCTT  400

seq1  CCTCAATGCTTACTTTCCCTTGTACCATTCCCCTGCCTCTTCCTGAACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGCTTACTTTCCCTTGTACCATTCCCCTGCCTCTTCCTGAACCC  450

seq1  CAGTAGTAACTGGTATCCTGGCTTCTGACTGCATACAGTAGCGGGGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTAACTGGTATCCTGGCTTCTGACTGCATACAGTAGCGGGGCTGA  500

seq1  TTTAGACTTGAACAGATGGAGTCATAACGGAATGTCCACTTGTGTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACTTGAACAGATGGAGTCATAACGGAATGTCCACTTGTGTTTCTG  550

seq1  GTTGCTTTCAGGCAGCATTACATTTGTTGACGGGGTCAGTATTTTGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTTCAGGCAGCATTACATTTGTTGACGGGGTCAGTATTTTGTTGC  600

seq1  ATGTGCTTATCCATGATTTCTTCCCGCAATCGGATTCTGTTCTGGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTTATCCATGATTTCTTCCCGCAATCGGATTCTGTTCTGGAAAAC  650

seq1  TGTAAATTAGTTTTGGTACCTTAGAGAAAGGAATACGCTGCTGCATAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTAGTTTTGGTACCTTAGAGAAAGGAATACGCTGCTGCATAATC  700

seq1  CTAAACAGAATTTGTTCTTCTCTCTAGGTATAAAGCATGAGTATCAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAGAATTTGTTCTTCTCTCTAGGTATAAAGCATGAGTATCAAGCA  750

seq1  AATGGGCCAGAAGACCTCAATCGGACCTGTATTGCTGAAAAGCTAGGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGCCAGAAGACCTCAATCGGACCTGTATTGCTGAAAAGCTAGGTGG  800

seq1  CTCC-TTAATTGTAGCCTTTGAAGGATCCCCTGTGTAGACCGCCAGTCAG  849
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTATTTGTAGCCTTTGAAGGATCCCCTGTGTAGACCGCCAGTCAG  850

seq1  TGCCACGAGTTGAAAGCTTCCATACTGAACACTAT-CCTTTCACTATATA  898
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGCCACGAGTTGAAAGCTTCCATACTGAACACTATCCCTTTCACTATATA  900

seq1  AGTAAAGCAAATATATTAGGCCAGGATCTCACTGAGGAATTTGTCTTGTC  948
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  AGTAAAGCAAATATATTA-GCCAGGATCTCACTGAGGAATTTGTC-TGTC  948

seq1  ATCTTTTAGAGTAAACTAAAAATTGTATAGTGTCTGCAAACACTACCCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAGAGTAAACTAAAAATTGTATAGTGTCTGCAAACACTACCCTA  998

seq1  CCTAAATCCAGCCTCTAAGGTCTCACTGGTGTGGAATTAAACTCTTATTG  1048
      |||||||||||||||  | |||||||||||||| ||||||||||||||||
seq2  CCTAAATCCAGCCTCCTAAGTCTCACTGGTGTGAAATTAAACTCTTATTG  1048

seq1  GCCAAATGCCTGTTTTCATGAGGTGACTTGTAAAGATTTTGTTAAGCTCA  1098
      |||||||||||| |||||||| ||||||||| ||  ||||||||||||||
seq2  GCCAAATGCCTG-TTTCATGAAGTGACTTGTTAAAGTTTTGTTAAGCTCA  1097

seq1  GGATTTTTAATAACACAGTTCACAAAACAGTACAAGGCAGTATGAC-GAG  1147
       |||||| |  ||||||||||  |||||||  | ||||||| |||| |||
seq2  -GATTTTAATAAACACAGTTCCAAAAACAGATCCAGGCAGTTTGACTGAG  1146

seq1  AACTCATC---TTTGCTAACCTCAGCA-GTTACT  1177
      |||||  |   |||||  ||||||||| ||||||
seq2  AACTCTACTCTTTTGCCTACCTCAGCATGTTACT  1180

seq1: chr2_143911915_143912651
seq2: B6Ng01-189G15.g_64_801 (reverse)

seq1  GAGTTGTTTGTCCTGCTCCTTAATGAAACTTGGACTAGGCAAACCCTGCC  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAGTTGTTTGTCCTGCTCCTTAATGAAACTTGGGCTAGGCAAACCCTGCC  50

seq1  AGATAAGCCAGTCTGTGACCCGGGAGAACAAAGGTCGGCTTCTGGAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGCCAGTCTGTGACCCGGGAGAACAAAGGTCGGCTTCTGGAAGGG  100

seq1  GTGCAGATGCT-TCCTGGGTTCTCGGGGAGGGGAACCCACCAGGGCATCC  149
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGATGCTATCCTGGGTTCTCGGGGAGGGGAACCCACCAGGGCATCC  150

seq1  GTCTCCCTGGGACCTCCCCGTGCTGGCTCCCCTGGCCTTGTGGACAAGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCTGGGACCTCCCCGTGCTGGCTCCCCTGGCCTTGTGGACAAGGA  200

seq1  CGGCTGCCCACAGTCCTTGGAAGGCAGTAGCCTCTGGAAGAGGCTGTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGCCCACAGTCCTTGGAAGGCAGTAGCCTCTGGAAGAGGCTGTGCT  250

seq1  GCAAACACAGGCCTGGGGACCGGAAAGGCAGGTCTCAGCAGACGCAGGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACACAGGCCTGGGGACCGGAAAGGCAGGTCTCAGCAGACGCAGGGA  300

seq1  AATCCCTTCCCTGGCCCAGCCAGGCACCGCAGGGAGTCCCTGTGGAGCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTTCCCTGGCCCAGCCAGGCACCGCAGGGAGTCCCTGTGGAGCCT  350

seq1  CCCCATTGTACCACACTTCCGCCCAAGCCCCTGGACTTTCTACTGTAGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTGTACCACACTTCCGCCCAAGCCCCTGGACTTTCTACTGTAGCT  400

seq1  GAGGAGCAAATTCCCAAGCCCAATATGGTCATGTTTTTAAAGTGCCCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCAAATTCCCAAGCCCAATATGGTCATGTTTTTAAAGTGCCCACA  450

seq1  AGTCGATGAACAAAGTCCCACAATGAATGGTCTCAGGGTCAAATCTGCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGATGAACAAAGTCCCACAATGAATGGTCTCAGGGTCAAATCTGCAC  500

seq1  CAAAAAAAAAAAAAAAAAAAAAAAAACAAGCTCAGCGCTCATCTGAATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAAAAAAAAAAACAAGCTCAGCGCTCATCTGAATCA  550

seq1  CAAACTCACACTGCATTCCTCCCTCACCGGGTCCACGCCCCGCTCCCACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCACACTGCATTCCTCCCTCACCGGGTCCACGCCCCGCTCCCACC  600

seq1  CGCAGCCCGCACACCCCTGCCCTACCCCGCACAGCCAGTGCCTTGCCCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGCCCGCACACCCCTGCCCTACCCCGCACAGCCAGTGCCTTGCCCTC  650

seq1  CCCCATAAGGTCTATAAAATATGGTTCCCACCGAGATTGGCCTCAGAGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATAAGGTCTATAAAATATGGTTCCCACCGAGATTGGCCTCAGAGAT  700

seq1  TCAGCCTCCTAACTTCTGACTGGAATATCCTGGAATTC  737
      ||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCCTAACTTCTGACTGGAATATCCTGGAATTC  738