BAC Information

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BAC

Clone NameB6Ng01-189L24
Chromosome2 (Build37)
Map Location 134,319,069 - 134,442,269
singlet/doubletdoublet
Overlap geneHao1, Txndc13
Upstream geneBmp2
Downstream geneLOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189L24.bB6Ng01-189L24.g
ACCGA013688GA013689
length1,0491,153
definitionB6Ng01-189L24.b B6Ng01-189L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,441,737 - 134,442,269)(134,319,069 - 134,320,225)
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcagaagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtctaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattcttttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctacttcctcttgggtgaatttgctttcctttttttcta
gggctttttagatgttgttgtcaagctgctagtatgtgctgtctcccgtt
tcttctggaagcactcagagctatgagttttcctcttagaaatgcctttc
attgtgtccaataaggtttgggtaacgttgtggcttcattttccattaa

gaattccttagagaatgatttcatgctagctcctacttagccatttgaca
tactctctgttgggaattcttccttatgtctaacttatgctgttattctt
cttaggcttccaaggtctgtcatcacaggacatgccaaggttcttcttgc
tcctactttggtaagagcttgcacacacatcgcttcttacagtttgtgat
catgtcctactggtcagtaatattaccaggcacctagacaatgagctcta
acctccagggttgttttcttaaaatgatgtgtcccttcagtgtctggact
gatgatattaaacaaaattcttgcttttgcttcaatgaatcataactaaa
actcttaataagaaaacctacccaaggaaacaaaaaacaaagctaattta
gatcaactttctgtccaaataattttaaaatataattacatgtataattt
taattattaatcttgatgtgcaaataagttataaatcatattttatttac
tcttgtagtttatatacctgtgctgtgggaaatagcagttgtgataaatc
caaaagctacattgctcccagagactccacttctcatgccagcatctggg
attccccacttcctgacttctagaaggatctgggaaattttcagttgaac
attgtcattatctaggttcagaaaagtatccttagagaagcaaacaggaa
atgatttgtttgaaaaagcatccttttcttttccctcagctgtctatgga
gaatcagattgaggagagaagagccctattgcacaagttagatttggaaa
ggacaggaaattgtatcatttaaacagataaaagttttctgtcttataaa
catataatgatggcttgctatcacttgggtttaacatatcacttaaaata
aattgtcaccctgaagtctttctataattgccagatgacagagtgcacac
tataaagagtacaaggtcagagtgtgtcctccgtttctatgtaatacaaa
acttcatattttttatagacagacctttattttgtgctattgccacttac
atgcaacacagtgcatgtaataaactaatggaattacgagaagaaaaatc
tttcttctcattggaaacaggcacaaacctccttccatgcctatcctaat
gca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134441737_134442269
seq2: B6Ng01-189L24.b_572_1094 (reverse)

seq1  TTAATGACTTTTTAGAGTTTAAT-GAAAATGAAGCCACAACG-TACCCAA  48
                        ||||| |||||||||||||||||| |||||||
seq2  ------------------TTAATGGAAAATGAAGCCACAACGTTACCCAA  32

seq1  ACC-TATGGGACACAATGAAA-GCATTTCTAAGAGGGAAACTCATAGCTC  96
      ||| ||| ||||||||||||| |||||||||||||| |||||||||||||
seq2  ACCTTATTGGACACAATGAAAGGCATTTCTAAGAGGAAAACTCATAGCTC  82

seq1  TGAGTGCCTCCAAGAAGAAACGGGAGACAGCACATACTAGCAGCTTGACA  146
      ||||||| ||| ||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTTCC-AGAAGAAACGGGAGACAGCACATACTAGCAGCTTGACA  131

seq1  AC-ACATCT-AAAAGCCCTAGAAAAAAAGG-AAGCAAATTCACCCAAGAG  193
      || |||||| |||||||||||||||||||| |||||||||||||||||||
seq2  ACAACATCTAAAAAGCCCTAGAAAAAAAGGAAAGCAAATTCACCCAAGAG  181

seq1  G-AGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTG  242
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTG  231

seq1  GAAACAAGAAGAACTATTC-AAAGAATTAACCAAACGAGGAGTTGGTTCT  291
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAAACAAGAAGAACTATTCAAAAGAATTAACCAAACGAGGAGTTGGTTCT  281

seq1  TTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGG  331

seq1  CACAGGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGACAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGACAT  381

seq1  AACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAA  431

seq1  GGCTATACTCAACAAAACTGGAAAACCTAGACGAAATGGACAAATTTCTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATACTCAACAAAACTGGAAAACCTAGACGAAATGGACAAATTTCTG  481

seq1  GACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGAC  533
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGAC  523


seq1: chr2_134319069_134320225
seq2: B6Ng01-189L24.g_64_1216

seq1  GAATTCCTTAGAGAATGATTTCATGCTAGCTCCTACTTAGCCATTTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGAGAATGATTTCATGCTAGCTCCTACTTAGCCATTTGACA  50

seq1  TACTCTCTGTTGGGAATTCTTCCTTATGTCTAACTTATGCTGTTATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTGTTGGGAATTCTTCCTTATGTCTAACTTATGCTGTTATTCTT  100

seq1  CTTAGGCTTCCAAGGTCTGTCATCACAGGACATGCCAAGGTTCTTCTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCTTCCAAGGTCTGTCATCACAGGACATGCCAAGGTTCTTCTTGC  150

seq1  TCCTACTTTGGTAAGAGCTTGCACACACATCGCTTCTTACAGTTTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTTTGGTAAGAGCTTGCACACACATCGCTTCTTACAGTTTGTGAT  200

seq1  CATGTCCTACTGGTCAGTAATATTACCAGGCACCTAGACAATGAGCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCTACTGGTCAGTAATATTACCAGGCACCTAGACAATGAGCTCTA  250

seq1  ACCTCCAGGGTTGTTTTCTTAAAATGATGTGTCCCTTCAGTGTCTGGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCAGGGTTGTTTTCTTAAAATGATGTGTCCCTTCAGTGTCTGGACT  300

seq1  GATGATATTAAACAAAATTCTTGCTTTTGCTTCAATGAATCATAACTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATATTAAACAAAATTCTTGCTTTTGCTTCAATGAATCATAACTAAA  350

seq1  ACTCTTAATAAGAAAACCTACCCAAGGAAACAAAAAACAAAGCTAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAATAAGAAAACCTACCCAAGGAAACAAAAAACAAAGCTAATTTA  400

seq1  GATCAACTTTCTGTCCAAATAATTTTAAAATATAATTACATGTATAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACTTTCTGTCCAAATAATTTTAAAATATAATTACATGTATAATTT  450

seq1  TAATTATTAATCTTGATGTGCAAATAAGTTATAAATCATATTTTATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAATCTTGATGTGCAAATAAGTTATAAATCATATTTTATTTAC  500

seq1  TCTTGTAGTTTATATACCTGTGCTGTGGGAAATAGCAGTTGTGATAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAGTTTATATACCTGTGCTGTGGGAAATAGCAGTTGTGATAAATC  550

seq1  CAAAAGCTACATTGCTCCCAGAGACTCCACTTCTCATGCCAGCATCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTACATTGCTCCCAGAGACTCCACTTCTCATGCCAGCATCTGGG  600

seq1  ATTCCCCACTTCCTGACTTCTAGAAGGATCTGGGAAATTTTCAGTTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCACTTCCTGACTTCTAGAAGGATCTGGGAAATTTTCAGTTGAAC  650

seq1  ATTGTCATTATCTAGGTTCAGAAAAGTATCCTTAGAGAAGCAAACAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATTATCTAGGTTCAGAAAAGTATCCTTAGAGAAGCAAACAGGAA  700

seq1  ATGATTTGTTTGAAAAAGCATCCTTTTCTTTTCCCTCAGCTGTCTATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTGTTTGAAAAAGCATCCTTTTCTTTTCCCTCAGCTGTCTATGGA  750

seq1  GAATCAGATTGAGGAGAGAAGAGCCCTATTGCACAAGTTAGATTTGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGATTGAGGAGAGAAGAGCCCTATTGCACAAGTTAGATTTGGAAA  800

seq1  GGACAGGAAATTGTATCATTTAAAACAGATAAAAGTTTTCTGTCTTATAA  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGACAGGAAATTGTATCATTT-AAACAGATAAAAGTTTTCTGTCTTATAA  849

seq1  ACATATAATGATGGCTTGCTATCACTTGGG-TTAACATATCACTTAAAAT  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACATATAATGATGGCTTGCTATCACTTGGGTTTAACATATCACTTAAAAT  899

seq1  AAATTGTCACCCTGAAGTCTTTCTATAATTGCCAGATGACAGAGTGCACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTCACCCTGAAGTCTTTCTATAATTGCCAGATGACAGAGTGCACA  949

seq1  CTATAAAAGAGTACAAGGTCAGAGTGTGTCCTCCGTTTCTATGTAATACA  999
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAT-AAAGAGTACAAGGTCAGAGTGTGTCCTCCGTTTCTATGTAATACA  998

seq1  AAACCTTCATA-TTTTTATAGACAGA-CTTTATTTTGTTGCTA-TGCAAC  1046
      ||| ||||||| |||||||||||||| |||||||||| ||||| ||| ||
seq2  AAA-CTTCATATTTTTTATAGACAGACCTTTATTTTG-TGCTATTGCCAC  1046

seq1  TTACATGCAACACAGTGCATGTAAATAAATTATGGATTTTACAGAGAAAG  1096
      ||||||||||||||||||||||||  || | |||||  |||| ||| |||
seq2  TTACATGCAACACAGTGCATGTAATAAACTAATGGA-ATTAC-GAG-AAG  1093

seq1  AAAAATCCTTTCTTCTTCATTGAGAACAAGCCACAACTTCCTTTCATG-C  1145
      |||||| |||||||| ||||||  |||| ||   ||| ||||| |||| |
seq2  AAAAAT-CTTTCTTC-TCATTGGAAACAGGCACAAACCTCCTTCCATGCC  1141

seq1  TATCCTAATGCA  1157
      ||||||||||||
seq2  TATCCTAATGCA  1153


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