BAC Information

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BAC

Clone NameB6Ng01-190A01
Chromosome2 (Build37)
Map Location 113,557,541 - 113,558,661
singlet/doubletsinglet
Overlap genenone
Upstream geneRyr3, 4930563P21Rik, Fmn1
Downstream geneGrem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770, Atpbd4, LOC100043219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190A01.bB6Ng01-190A01.g
ACCGA013875GA013876
length1,1971,123
definitionB6Ng01-190A01.b B6Ng01-190A01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagtaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcaattgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaaatggtgctgg
cacaactgggttgttatcatgtagagatgcgaatcgatccatacttatct
ccttgtactaggtcaaatctaaatggatcaaagaacttcacataaaacca
gagacactgaaacttatagaggagaagtggggaaagccttgagatatggc
cagggaaactctgaacagaagcaatggccttgggctgtagatcgaacgca
tgacctaatgaactcaagttctgcaggcaagaactcgcgtctccatt
gaattcttgggacacgagaaaaaaaaatctcttcatctccagaaaaacca
atgaggtacaattgactcacagaaaactacatccagaatatgaactatat
caagactgagacttgatctcttggcaatgtcacaaaagcccactgattgc
ttgtcctctctatcctattaaattggcctccaaatactcctttgtggaga
atcttcctagggtgattattggaaaagaagtatctaaagcttgttgtttt
gattagagcatcttagtggggaggaggcttatgcatcctaaggacacagg
gaaagataccagactagcatagaaagactctcttgcctgcttgaaccata
acttattctcccatgatgaatttttacatgtgcagtttcttttttgtcct
ttaaattgcatagctaatgttctcattttcaaatttagactgttttgtgt
tattataacagtgcccagggctaggttatttacaagcacaaatatgtagg
ttcagagtacgagacattgacaaggaccagtatcacaccaccacaccctg
gcaagcaaaggccttcttgctgcatcatccaccacaacgcagaaggcaga
agagctgaagccaagtcaactgcttcataataggattgaccaccatcaat
cttgagaacagaagacccaatctctgaatgctattatagtagtgattacc
tatagtgccttttgaaaagggaaacatttaaaccatagcacagaccataa
gttcctgacactaaatcaactatccatttgactttctttcacttttacgt
ggtttataataatgagaataaaagactttagagttgacctatatgagttc
tgtctgttttcctttgatttggaatcctcttggcctaaaatttttaaaga
attaccaaattatctaagcactttacttggtcttctaatgttcagtgtag
ttgtaaagaccaaaatgctctggtatccttactgaaagatactgaaataa
actgaaactagaatgtaaaatttttgaaaaataagaataaaggactacaa
tgagtcagaactccattaacctatgaatagaacatcaggagtcaaaaatg
atgaaaggactctcttgacttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_113557541_113558661
seq2: B6Ng01-190A01.g_64_1186

seq1  GAATTCTTGGGACACGAGAAAAAAAAATCTCTTCATCTCCAGAAAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGACACGAGAAAAAAAAATCTCTTCATCTCCAGAAAAACCA  50

seq1  ATGAGGTACAATTGACTCACAGAAAACTACATCCAGAATATGAACTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTACAATTGACTCACAGAAAACTACATCCAGAATATGAACTATAT  100

seq1  CAAGACTGAGACTTGATCTCTTGGCAATGTCACAAAAGCCCACTGATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTGAGACTTGATCTCTTGGCAATGTCACAAAAGCCCACTGATTGC  150

seq1  TTGTCCTCTCTATCCTATTAAATTGGCCTCCAAATACTCCTTTGTGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTCTATCCTATTAAATTGGCCTCCAAATACTCCTTTGTGGAGA  200

seq1  ATCTTCCTAGGGTGATTATTGGAAAAGAAGTATCTAAAGCTTGTTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTAGGGTGATTATTGGAAAAGAAGTATCTAAAGCTTGTTGTTTT  250

seq1  GATTAGAGCATCTTAGTGGGGAGGAGGCTTATGCATCCTAAGGACACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGAGCATCTTAGTGGGGAGGAGGCTTATGCATCCTAAGGACACAGG  300

seq1  GAAAGATACCAGACTAGCATAGAAAGACTCTCTTGCCTGCTTGAACCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATACCAGACTAGCATAGAAAGACTCTCTTGCCTGCTTGAACCATA  350

seq1  ACTTATTCTCCCATGATGAATTTTTACATGTGCAGTTTCTTTTTTGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTCTCCCATGATGAATTTTTACATGTGCAGTTTCTTTTTTGTCCT  400

seq1  TTAAATTGCATAGCTAATGTTCTCATTTTCAAATTTAGACTGTTTTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGCATAGCTAATGTTCTCATTTTCAAATTTAGACTGTTTTGTGT  450

seq1  TATTATAACAGTGCCCAGGGCTAGGTTATTTACAAGCACAAATATGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAACAGTGCCCAGGGCTAGGTTATTTACAAGCACAAATATGTAGG  500

seq1  TTCAGAGTACGAGACATTGACAAGGACCAGTATCACACCACCACACCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTACGAGACATTGACAAGGACCAGTATCACACCACCACACCCTG  550

seq1  GCAAGCAAAGGCCTTCTTGCTGCATCATCCACCACAACGCAGAAGGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAAGGCCTTCTTGCTGCATCATCCACCACAACGCAGAAGGCAGA  600

seq1  AGAGCTGAAGCCAAGTCAACTGCTTCATAATAGGATTGACCACCATCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAAGCCAAGTCAACTGCTTCATAATAGGATTGACCACCATCAAT  650

seq1  CTTGAGAACAGAAGACCCAATCTCTGAATGCTATTATAGTAGTGATTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAACAGAAGACCCAATCTCTGAATGCTATTATAGTAGTGATTACC  700

seq1  TATAGTGCCTTTTGAAAAGGGAAACATTTAAACCATAGCACAGACCATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGCCTTTTGAAAAGGGAAACATTTAAACCATAGCACAGACCATAA  750

seq1  GTTCCTGACACTAAATCAACTATCCATTTGACTTTCTTTCACTTTTACGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGACACTAAATCAACTATCCATTTGACTTTCTTTCACTTTTACGT  800

seq1  GGTTTATAATAATGAGAATAAAAGACTTTAGAGTTGACCTATATGAGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATAATAATGAGAATAAAAGACTTTAGAGTTGACCTATATGAGTTC  850

seq1  TGTCTGTTTTCCTTTGATTTGGAATCCTCTTGGCCTAAAATTTTTAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTTTCCTTTGATTTGGAATCCTCTTGGCCTAAAATTTTTAAAGA  900

seq1  ATTACCAAATTATCTAAGCACTTTACTTGGTCTTCTAATGTTCAGTGTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCAAATTATCTAAGCACTTTACTTGGTCTTCTAATGTTCAGTGTAG  950

seq1  TTGTAAAGACCAAAATGCTCTGGGTATCCTTACTGAAAGATACTGAAATA  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGTAAAGACCAAAATGCTCT-GGTATCCTTACTGAAAGATACTGAAATA  999

seq1  AACTGAAACTAGAATGTAAAATTTTTG-AAAATAAG-ATAAAGGAC-ACA  1047
      ||||||||||||||||||||||||||| |||||||| ||||||||| |||
seq2  AACTGAAACTAGAATGTAAAATTTTTGAAAAATAAGAATAAAGGACTACA  1049

seq1  ATGAGGCCAGAACTCCATT-ACTAATGATAAGACAATCAAGGAGTCAAAA  1096
      |||| | |||||||||||| ||  ||||  |||  ||| |||||||||||
seq2  ATGA-GTCAGAACTCCATTAACCTATGAATAGAACATC-AGGAGTCAAAA  1097

seq1  ATGATGAAA-GACTCTCTTGACTTCT  1121
      ||||||||| ||||||||||||||||
seq2  ATGATGAAAGGACTCTCTTGACTTCT  1123