BAC Information

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BAC

Clone NameB6Ng01-190B14
Chromosome2 (Build37)
Map Location 114,182,681 - 114,331,403
singlet/doubletdoublet
Overlap genenone
Upstream geneFmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1, Aqr, Zfp770
Downstream geneAtpbd4, LOC100043219, LOC100043222, LOC100043232
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190B14.bB6Ng01-190B14.g
ACCGA013941GA013942
length1,1891,131
definitionB6Ng01-190B14.b B6Ng01-190B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,330,197 - 114,331,403)(114,182,681 - 114,183,833)
sequence
gaattcttccaatttcttaatagaaattaaatctcttttccctgtttact
aggttatttttggttttgtttagtgtatttatatgatgataatggaacat
tcaaaaaatgactaagtgtatcttaagcattacagcacacgaacagatga
gctagaatttttgctctgagtatttgaatttgactattggccttacatat
tacatttcactcaattttgacataaacatttaagaaacattttaggtatg
atattagttttcaggtttttattaaaagaacaaaatggagttctctatct
tttcttattgatatgaatgcagatgggtactaggaagtattggatttcca
tctgtgtaattactgtaggaataaaggaaaatgaagagagtacagacagg
aagaccagccttgaatagagagctcttaagccagcttgcaacaagagtat
actgagggcaatttgcattcaactatgtccaggtatgaatgaattcaaat
gtttaataaatgacttaatttcagcttcaaataacagcagaaatccaggt
gatcattaattaatctgcttcatttttctaaaatctctaaattatttatt
gaaaatgtttaacatttttattaacattcatgttactatttttatagaaa
aatccaggttaaagtctatttagaaatttattttaataattatggagaaa
ttctactttatttctcagttatatgatacttattttcaaaactatttgaa
acccaactatgtttgaagtttaggggtctggaaccatggctcagtgatta
agagacagagccttactgctcttatagacagaactagagttccattctta
gtatccacaaggcagctcacaaatgggtcagactctagttttagggcatg
caatgcaacctttgggcctctgtgacataaacataccttcatgcaaacag
atgcatataatgttttaatgaaagagtttgttagatagagtacctatgga
agtgatctataagtaaactaatttctttaaaatgtcacttagtgctgtaa
taaagaaaagaatgtatctgctcattccactataaatataaaaataaatg
ataaaatggaatatatctatgttggtgcctattgaatctaggttatccca
catacccacggtattggaaatggccaattgccaaattat
gaattcaaaccacaggatccacatgagagaagaagagaatttactatgtc
cagttagtccctggcttccattcactcaccgacagaggcatcaacacaca
gacacactctaaataataaaacaaaataaagataagctatttagcaagat
atgatactgtacaccattaaccctatcactcagggggctgacaattaaga
gtaagtaccaagagtctgtggccagcctgggctacatagtttattagaat
tgtctttgcttgagcatctaatatgacacagccaaaaaaaaaaggattat
tactttatcactttagtgggatttgctaagttatgtcaacttcatgagaa
aaatataggggctagttcttcattaaataaaagaaaatcaatggtaatac
aatcaatgatgaatcgataatatttttgatacatttaccttctgcaatag
ccatttagcaagttcttgtacaaattcagctttaagctttttgtttttca
aaatttgaatacaaattgatctttccttctggcattttcatacatatttt
cggttgttccccaccactgttcttccttatctgtcagccctcagtacctg
tttgtacttgcccttttcaccttcagtatccttcctctgtctacattcat
gttacatgtgttttcttggtctcaacacccctccctgtgttttctagtat
tttattttttcctttcacacagtaattaaaatggttatggaaattctcgt
ttcccaggaagaagttcaatgtaggggaaaaaaaataagaggaaatgtat
tctacaagatgctgtcatcacttttgttctgtatttaataggcaaagaaa
tgtcaggctaaacaactaacagtctgactttagaaatgacacctacgagt
tagccaaggacagaatttactatccccctccctaaatggtgagagatatc
agaaaagttaccaattagtcacactcacaacagatggactgattgtccca
cccacttgtctgggacttcaaggggctgaaagatcacaggagcacactgt
tgaacgtgatgagctacccaggggagagaacaacagaatgtcgtggcagc
tctcagaaatgctggcacagtgcttcccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_114330197_114331403
seq2: B6Ng01-190B14.b_45_1233 (reverse)

seq1  ATAAATTGGCAATTG--CATAT-CAATACAGTGGGGTAGTGGGATAACAT  47
      |||| ||||||||||  ||| | |||||| |||||   |||||||||| |
seq2  ATAATTTGGCAATTGGCCATTTCCAATACCGTGGGTATGTGGGATAACCT  50

seq1  TTAGGATCAAATAGGCACCAAACAATTAAGATATA-TCAATTTTTAATCC  96
          |||  |||||||||| ||||    ||||||| || |||||  ||| 
seq2  ---AGATTCAATAGGCACC-AACA---TAGATATATTCCATTTT--ATC-  90

seq1  ATTTTAATTTTATATTTATAAGTGGAATGGAGCAGGATACATTCTTTTCT  146
        |||| |||||||||||| |||||||| ||||| |||||||||||||||
seq2  -ATTTATTTTTATATTTAT-AGTGGAAT-GAGCA-GATACATTCTTTTCT  136

seq1  TTTAATTACAGCACTAAGTGACCAATTTTTAAAAGAAAATTAGTTTACCT  196
      ||  ||||||||||||||||||  |||||  |||| ||||||||||| ||
seq2  TT--ATTACAGCACTAAGTGAC--ATTTT--AAAG-AAATTAGTTTA-CT  178

seq1  TATAGATCAACTTCCATAGGTACTCTATCTAACAAACTCTTTCATTAAAA  246
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATC-ACTTCCATAGGTACTCTATCTAACAAACTCTTTCATTAAAA  227

seq1  CATTATATGCATCTGTTTGCATGAAGGTATGTTTATGTCACAGAGG-CCA  295
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATTATATGCATCTGTTTGCATGAAGGTATGTTTATGTCACAGAGGCCCA  277

seq1  AAGGTTGCATTGCATGCCCTAAAACTAGAGTCTGACCCATTTGTGAGCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTGCATTGCATGCCCTAAAACTAGAGTCTGACCCATTTGTGAGCTG  327

seq1  CCTTGTGGATACTAAGAATGGAACTCTAGTTCTGTCTATAAGAGCAGTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGATACTAAGAATGGAACTCTAGTTCTGTCTATAAGAGCAGTAA  377

seq1  GGCTCTGTCTCTTAATCACTGAGCCATGGTTCCAGACCCCTAAACTTCAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTCTCTTAATCACTGAGCCATGGTTCCAGACCCCTAAACTTCAA  427

seq1  ACATAGTTGGGTTTCAAATAGTTTTGAAAATAAGTATCATATAACTGAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTTGGGTTTCAAATAGTTTTGAAAATAAGTATCATATAACTGAGA  477

seq1  AATAAAGTAGAATTTCTCCATAATTATTAAAATAAATTTCTAAATAGACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTAGAATTTCTCCATAATTATTAAAATAAATTTCTAAATAGACT  527

seq1  TTAACCTGGATTTTTCTATAAAAATAGTAACATGAATGTTAATAAAAATG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTGGATTTTTCTATAAAAATAGTAACATGAATGTTAATAAAAATG  577

seq1  TTAAACATTTTCAATAAATAATTTAGAGATTTTAGAAAAATGAAGCAGAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATTTTCAATAAATAATTTAGAGATTTTAGAAAAATGAAGCAGAT  627

seq1  TAATTAATGATCACCTGGATTTCTGCTGTTATTTGAAGCTGAAATTAAGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATGATCACCTGGATTTCTGCTGTTATTTGAAGCTGAAATTAAGT  677

seq1  CATTTATTAAACATTTGAATTCATTCATACCTGGACATAGTTGAATGCAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTAAACATTTGAATTCATTCATACCTGGACATAGTTGAATGCAA  727

seq1  ATTGCCCTCAGTATACTCTTGTTGCAAGCTGGCTTAAGAGCTCTCTATTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTCAGTATACTCTTGTTGCAAGCTGGCTTAAGAGCTCTCTATTC  777

seq1  AAGGCTGGTCTTCCTGTCTGTACTCTCTTCATTTTCCTTTATTCCTACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGTCTTCCTGTCTGTACTCTCTTCATTTTCCTTTATTCCTACAG  827

seq1  TAATTACACAGATGGAAATCCAATACTTCCTAGTACCCATCTGCATTCAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACACAGATGGAAATCCAATACTTCCTAGTACCCATCTGCATTCAT  877

seq1  ATCAATAAGAAAAGATAGAGAACTCCATTTTGTTCTTTTAATAAAAACCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAGAAAAGATAGAGAACTCCATTTTGTTCTTTTAATAAAAACCT  927

seq1  GAAAACTAATATCATACCTAAAATGTTTCTTAAATGTTTATGTCAAAATT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAATATCATACCTAAAATGTTTCTTAAATGTTTATGTCAAAATT  977

seq1  GAGTGAAATGTAATATGTAAGGCCAATAGTCAAATTCAAATACTCAGAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAATGTAATATGTAAGGCCAATAGTCAAATTCAAATACTCAGAGC  1027

seq1  AAAAATTCTAGCTCATCTGTTCGTGTGCTGTAATGCTTAAGATACACTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCTAGCTCATCTGTTCGTGTGCTGTAATGCTTAAGATACACTTA  1077

seq1  GTCATTTTTTGAATGTTCCATTATCATCATATAAATACACTAAACAAAAC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTTTGAATGTTCCATTATCATCATATAAATACACTAAACAAAAC  1127

seq1  CAAAAATAACCTAGTAAACAGGGAAAAGAGATTTAATTTCTATTAAGAAA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAACCTAGTAAACAGGGAAAAGAGATTTAATTTCTATTAAGAAA  1177

seq1  TTGGAAGAATTC  1207
      ||||||||||||
seq2  TTGGAAGAATTC  1189

seq1: chr2_114182681_114183833
seq2: B6Ng01-190B14.g_64_1194

seq1  GAATTCAAACCACAGGATCCACATGAGAGAAGAAGAGAATTTACTATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCACAGGATCCACATGAGAGAAGAAGAGAATTTACTATGTC  50

seq1  CAGTTAGTCCCTGGCTTCCATTCACTCACCGACAGAGGCATCAACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAGTCCCTGGCTTCCATTCACTCACCGACAGAGGCATCAACACACA  100

seq1  GACACACTCTAAATAATAAAACAAAATAAAGATAAGCTATTTAGCAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACTCTAAATAATAAAACAAAATAAAGATAAGCTATTTAGCAAGAT  150

seq1  ATGATACTGTACACCATTAACCCTATCACTCAGGGGGCTGACAATTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTGTACACCATTAACCCTATCACTCAGGGGGCTGACAATTAAGA  200

seq1  GTAAGTACCAAGAGTCTGTGGCCAGCCTGGGCTACATAGTTTATTAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTACCAAGAGTCTGTGGCCAGCCTGGGCTACATAGTTTATTAGAAT  250

seq1  TGTCTTTGCTTGAGCATCTAATATGACACAGCCAAAAAAAAAAGGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGCTTGAGCATCTAATATGACACAGCCAAAAAAAAAAGGATTAT  300

seq1  TACTTTATCACTTTAGTGGGATTTGCTAAGTTATGTCAACTTCATGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATCACTTTAGTGGGATTTGCTAAGTTATGTCAACTTCATGAGAA  350

seq1  AAATATAGGGGCTAGTTCTTCATTAAATAAAAGAAAATCAATGGTAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGGGGCTAGTTCTTCATTAAATAAAAGAAAATCAATGGTAATAC  400

seq1  AATCAATGATGAATCGATAATATTTTTGATACATTTACCTTCTGCAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGATGAATCGATAATATTTTTGATACATTTACCTTCTGCAATAG  450

seq1  CCATTTAGCAAGTTCTTGTACAAATTCAGCTTTAAGCTTTTTGTTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGCAAGTTCTTGTACAAATTCAGCTTTAAGCTTTTTGTTTTTCA  500

seq1  AAATTTGAATACAAATTGATCTTTCCTTCTGGCATTTTCATACATATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGAATACAAATTGATCTTTCCTTCTGGCATTTTCATACATATTTT  550

seq1  CGGTTGTTCCCCACCACTGTTCTTCCTTATCTGTCAGCCCTCAGTACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGTTCCCCACCACTGTTCTTCCTTATCTGTCAGCCCTCAGTACCTG  600

seq1  TTTGTACTTGCCCTTTTCACCTTCAGTATCCTTCCTCTGTCTACATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACTTGCCCTTTTCACCTTCAGTATCCTTCCTCTGTCTACATTCAT  650

seq1  GTTACATGTGTTTTCTTGGTCTCAACACCCCTCCCTGTGTTTTCTAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATGTGTTTTCTTGGTCTCAACACCCCTCCCTGTGTTTTCTAGTAT  700

seq1  TTTATTTTTTCCTTTCACACAGTAATTAAAATGGTTATGGAAATTCTCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTCCTTTCACACAGTAATTAAAATGGTTATGGAAATTCTCGT  750

seq1  TTCCCAGGAAGAAGTTCAATGTAGGGGAAAAAAAATAAGAGGAAATGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGAAGAAGTTCAATGTAGGGGAAAAAAAATAAGAGGAAATGTAT  800

seq1  TCTACAAGATGCTGTCATCACTTTTGTTCTGTATTTAATAGGCAAAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAGATGCTGTCATCACTTTTGTTCTGTATTTAATAGGCAAAGAAA  850

seq1  TGTCAGGGCTAAACAACTAACAGTCTGACTTTAGAAATGACACCTACGAG  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCA-GGCTAAACAACTAACAGTCTGACTTTAGAAATGACACCTACGAG  899

seq1  TTAGCCAAGGACAGAATTTACTATCCCCCTCCCTAAATGGTGAAGAAGAT  950
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  TTAGCCAAGGACAGAATTTACTATCCCCCTCCCTAAATGGTGA--GAGAT  947

seq1  ATCAGGAAAAGTTAACCAATTAGTCAACACTCAACCAACAGATGGACTGA  1000
      |||| |||||||| ||||||||||| |||||||  |||||||||||||||
seq2  ATCA-GAAAAGTT-ACCAATTAGTC-ACACTCA--CAACAGATGGACTGA  992

seq1  TTGTCCCACCCACTTGTCTGGGACTTTCAAAAGGGGCTGAGAGATCACAG  1050
      ||||||||||||||||||||||||||    |||||||||| |||||||||
seq2  TTGTCCCACCCACTTGTCTGGGACTT---CAAGGGGCTGAAAGATCACAG  1039

seq1  GGAAGCACACTG-TGAACGTGATGAGCTACCCAAGGGGAGAAGGAAACAA  1099
      |  ||||||||| ||||||||||||||||||| ||||||||  |||   |
seq2  G--AGCACACTGTTGAACGTGATGAGCTACCC-AGGGGAGA--GAA--CA  1082

seq1  ACAGAAGTGGTTCGTGGAAGCTCTCAGAAAATGCCTTGCCACAGTGC-TC  1148
      |||||| ||  |||||| ||||||||| ||||||  || |||||||| ||
seq2  ACAGAA-TG--TCGTGGCAGCTCTCAG-AAATGC--TGGCACAGTGCTTC  1126

seq1  CCTTC  1153
      |||||
seq2  CCTTC  1131