BAC Information

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BAC

Clone NameB6Ng01-190D16
Chromosome2 (Build37)
Map Location 26,984,897 - 26,986,002
singlet/doubletsinglet
Overlap geneC630035N08Rik
Upstream geneC330006A16Rik, Lhx3, Qscn6l1, C030048H21Rik, 4932418E24Rik, Gpsm1, D2Bwg1335e, Card9, Snapc4, Sdccag3, Pmpca, Inpp5e, AU024582, Notch1, Egfl7, Agpat2, B230317C12Rik, 5730588L14Rik, LOC100039446, Lcn4, LOC669582, Abo, Surf6, Surf5-ps, Surf5, Rpl7a, Surf1, Surf2, Surf4, Gm711, Rexo4, Adamts13, 5930434B04Rik, Slc2a6, LOC665315, 1110002H13Rik, Adamtsl2
Downstream geneDbh, Sardh, Vav2, D2Bwg1423e, Brd3, Wdr5, Rxra, Col5a1, Fcnb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190D16.bB6Ng01-190D16.g
ACCGA014037GA014038
length1,1271,227
definitionB6Ng01-190D16.b B6Ng01-190D16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggagtcctggggaatactgaagctccaagcagaacagattgt
ggggggtgggaagggaagatgaccatggagagccaggaacacagatattt
ggacctagaaccaatagttctaagctcagagactgatggggacaccatag
aagaaagtgtgcgccagagaaatcccagggggccattctggaaagtgtga
gctgcagcctgtcaagtgtgtgcttatacacagagaacgtccatctccac
tcaccaccctgcatgccttatacacagagaacgtccatctccactcacca
ccctgcatgccttatacacagagaacgtccatctccactcaccaccctgc
atgccttatacacagagaacgtccatctccactcaccaccctgcatgcct
tatacacagagaacgtccatctccactcaccgccctgcatgccttataca
cagagaacgtccatctccactcaccaccctgcatgccttatacacagaga
acgtccatctccactcaccaccctgcatgccttatacacagagaacgtcc
atctccactcaccaccctgcatgccttatacacagagaacgtccatctcc
actcaccaccctgcatgccttatacacagagaacgtccatctccactcac
caccctgcatgccttatacacagagaacgtccatctccactcaccgccct
gcatgccttatacacagagaacgtccatctccactcaccaccctgcatgc
cttatacacagagaacgtccatctctcactcaccgccctgcatgccctta
tacacagagaacgtccatctccactcaccaaccctgcaatgcctttaata
cacagagaacgtccatccccacctcaccaccctgcatgccctaatacaca
gaagaaccgtccatccccacccaccaaccctgcatgccttattaaacaga
gaacgtccatcccccactcaccgtgctgcatgcttatacacagagaacgt
ccattccccctctcaccgccttgaaagaccttatacacagagaacgtcca
ttcctcactcacgtgctgccatacccttattacacagagaacgtccatcc
tcttcctcaccgcgctggcatgcctta
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctactaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccgaggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaagggcagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacaccccatcaggagggtattcagctaaagcaaaaaatatcatgggc
aaagatgggttataaagaaggacaagggttaggaacatcaagaacaggga
aggatagagccccatctcacctaattggaaactcaagacagacagggtct
ggttttccttagccgcaattgggcgcagcacgaccccataccatggaaaa
caaggggacccagtgtggttctcaatgccactattcctctgaaaaactaa
gaagctgtgattccactggtagaggaaccaattaaaataggcatattgaa
ccttcctacctcaccctggaatcacttcattctgttattaagaaaagtca
gaaagtggaaactgtcttccattgaacctcgagagtccctaatgcgacga
atggtaaactattattgtgtggcgacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_26984897_26986002
seq2: B6Ng01-190D16.b_42_1168 (reverse)

seq1  TAAGGCATG-CAGCGCGGTGAG--AGGGGATGGACGTTCTCTGTGT-ATA  46
      ||||||||| ||||||||||||  || ||||||||||||||||||| |||
seq2  TAAGGCATGCCAGCGCGGTGAGGAAGAGGATGGACGTTCTCTGTGTAATA  50

seq1  A-GGTAT-GCAGCACGGTGAGTGAGG-ATGGACGTTCTCTGTGTATAAGG  93
      | ||||| ||||||| |||||||||| |||||||||||||||||||||||
seq2  AGGGTATGGCAGCAC-GTGAGTGAGGAATGGACGTTCTCTGTGTATAAGG  99

seq1  TC-TACAGGGCGGTGAGAGGGG--ATGGACGTTCTCTGTGTATAAGGCAT  140
      || | || ||||||||||||||  ||||||||||||||||||||| ||||
seq2  TCTTTCAAGGCGGTGAGAGGGGGAATGGACGTTCTCTGTGTATAA-GCAT  148

seq1  GCAGCACGGTGAGT-GGGGATGGACGTTCTCTGTGT-ATAAGGCATGCAG  188
      |||||||||||||| ||||||||||||||||||| | |||||||||||||
seq2  GCAGCACGGTGAGTGGGGGATGGACGTTCTCTGTTTAATAAGGCATGCAG  198

seq1  GG-TGGTGGGTGGGGATGGAC-GTTC-TCTGTGTA-TAAGGCATGCAGGG  234
      || |||||||||||||||||| |||| |||||||| || |||||||||||
seq2  GGTTGGTGGGTGGGGATGGACGGTTCTTCTGTGTATTAGGGCATGCAGGG  248

seq1  TGGTG-GGTGGGGATGGACGTTCTCTGTGTAT--AAGGCA-TGCAGGG-T  279
      ||||| ||||||||||||||||||||||||||  |||||| ||||||| |
seq2  TGGTGAGGTGGGGATGGACGTTCTCTGTGTATTAAAGGCATTGCAGGGTT  298

seq1  GGTGAGTGGAGATGGACGTTCTCTGTGTATAA-GGCATGCAGGGCGGTGA  328
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTGAGTGGAGATGGACGTTCTCTGTGTATAAGGGCATGCAGGGCGGTGA  348

seq1  GTG-GAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGA  377
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGA  398

seq1  GATGGACGTTCTCTGTGTATAAGGCATGCAGGGCGGTGAGTGGAGATGGA  427
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACGTTCTCTGTGTATAAGGCATGCAGGGCGGTGAGTGGAGATGGA  448

seq1  CGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCT  477
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCT  498

seq1  CTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGTGT  527
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGTGT  548

seq1  ATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGTGTATAAGG  577
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGTGTATAAGG  598

seq1  CATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGTGTATAAGGCATGCA  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGTGTATAAGGCATGCA  648

seq1  GGGTGGTGAGTGGAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGCGG  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGAGTGGAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGCGG  698

seq1  TGAGTGGAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTG  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTG  748

seq1  GAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATG  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATG  798

seq1  GACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTT  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTCTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTT  848

seq1  CTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGT  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTATAAGGCATGCAGGGTGGTGAGTGGAGATGGACGTTCTCTGT  898

seq1  GTATAAGCACACACTTGACAGGCTGCAGCTCACACTTTCCAGAATGGCCC  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGCACACACTTGACAGGCTGCAGCTCACACTTTCCAGAATGGCCC  948

seq1  CCTGGGATTTCTCTGGCGCACACTTTCTTCTATGGTGTCCCCATCAGTCT  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATTTCTCTGGCGCACACTTTCTTCTATGGTGTCCCCATCAGTCT  998

seq1  CTGAGCTTAGAACTATTGGTTCTAGGTCCAAATATCTGTGTTCCTGGCTC  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTAGAACTATTGGTTCTAGGTCCAAATATCTGTGTTCCTGGCTC  1048

seq1  TCCATGGTCATCTTCCCTTCCCACCCCCCACAATCTGTTCTGCTTGGAGC  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGTCATCTTCCCTTCCCACCCCCCACAATCTGTTCTGCTTGGAGC  1098

seq1  TTCAGTATTCCCCAGGACTCCTTGAATTC  1106
      |||||||||||||||||||||||||||||
seq2  TTCAGTATTCCCCAGGACTCCTTGAATTC  1127