BAC Information

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BAC

Clone NameB6Ng01-190E17
Chromosome2 (Build37)
Map Location 70,005,182 - 70,137,810
singlet/doubletdoublet
Overlap geneMyo3b
Upstream geneNostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650
Downstream geneLOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8, 4833418A01Rik, Cybrd1, Dync1i2, Slc25a12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190E17.bB6Ng01-190E17.g
ACCGA014085GA014086
length1,202623
definitionB6Ng01-190E17.b B6Ng01-190E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,005,182 - 70,006,388)(70,137,257 - 70,137,810)
sequence
gaattcttatactagttccatgggacagtagtagaaagataacatgtgac
agagatccttctttgtcttgtccaactggaaccccatagatggtttgttt
cttttcaagggtggagcactaatatttaattcagaccctggatttcacta
aagttctactctatatgtttagcacattactgagaaaaaaaccattcagc
aattgtgataaacactgtcttaagccgaggaaaatgttccaaccccattg
atggaagtattgacgtttggtgattaataaggaagtgctttcattgtgat
ctaagctaaatcagtgggcgaatgtcactgcagcaaaccctgattgcaag
gatgtttgggaggattcaaaatgttaatttttgcaagagctaggataaga
gagacttttctgactggtttacatgggcacttgatgaaagccctcattaa
ccctttcctgcaaggcttaaggtctggttagatggttgttccctgtggca
ggaaaaccacaactgccagcaacttgggggagcactctgacctgtaattg
cttgagttctggctgcacctacacctcttgggtgatttatacagtgtgag
gatttttccaaccatacctacaaacgttccagagttatacacagagatgg
tatttgtcttagataagagtagtaactatgttaccattttccttcctcta
ttgttaataaccgccatccttgcttttcaaaattgtagagtgtttgcttg
ttttgttctgtctcattttgggtgacaggaagcaagatattccagagtat
tttgtcaactaaaagtgaatttcttactgaacatcggcatctcgggttcc
tattttgcctttgtcctcttgctctgatgagccatttcaaaacaggaatg
agcaggtaagacgtcatagcacactgtatttagtttaggttccggcttcc
tctcaacaagggtctggactccctgtgcatgtgagttgtgcggctgaccc
tgtatcagctgagtatgactgggggagtgcctcctgcagtgctcagtagg
acacaaggggatccccccattcatcaatcacggaagggaggatctcaaat
tcctcttccccttaaactcactgaagaacttgctagctttcagcctgaat
gccactgtgttggaggggaagactgcactgaatctttgacctgaagctgc
ag
gaattcacagccttactgcaagcacaaagcaggtaaaaaaaaaaaaaaaa
aaaaaaaaaaactgacggagggtgggggttaaagctttcaaatttcaccc
cagtgccataccttcctcgagcaaggtgcccactaaaccttctaaaccag
ggcaatcaactggggtccacgtgtaatgggttggtcttgagagctgctaa
tactggctttcaagatctggttgcccccagataagcagatcctcttgcac
accaagtgatgctacgtgaatcttgctccctgatttaactgctcgataaa
aggctagagcctgtgattgggtgatagagggagacaggtggggcttaaag
attaagtgaggagagtgcaaggaggtagagagaaggaggaaagaggggaa
gacatgggtgagtgtggggtggagaaggccaccatgagaggagatagacc
atgagcacgtgtgcaggaaagacattagaaacaaccaatttataactata
gagtccagatctccaccctctctgcagctcacagaaaactatctgagata
accaagtaacttggcaagaagaggaggattctaaacgttgagggcatctt
taaatttattgaaggggagctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_70005182_70006388
seq2: B6Ng01-190E17.b_39_1240

seq1  GAATTCTTATACTAGTTCCATGGGACAGTAGTAGAAAGATAACATGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATACTAGTTCCATGGGACAGTAGTAGAAAGATAACATGTGAC  50

seq1  AGAGATCCTTCTTTGTCTTGTCCAACTGGAACCCCATAGATGGTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCCTTCTTTGTCTTGTCCAACTGGAACCCCATAGATGGTTTGTTT  100

seq1  CTTTTCAAGGGTGGAGCACTAATATTTAATTCAGACCCTGGATTTCACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAAGGGTGGAGCACTAATATTTAATTCAGACCCTGGATTTCACTA  150

seq1  AAGTTCTACTCTATATGTTTAGCACATTACTGAGAAAAAAACCATTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTACTCTATATGTTTAGCACATTACTGAGAAAAAAACCATTCAGC  200

seq1  AATTGTGATAAACACTGTCTTAAGCCGAGGAAAATGTTCCAACCCCATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGATAAACACTGTCTTAAGCCGAGGAAAATGTTCCAACCCCATTG  250

seq1  ATGGAAGTATTGACGTTTGGTGATTAATAAGGAAGTGCTTTCATTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTATTGACGTTTGGTGATTAATAAGGAAGTGCTTTCATTGTGAT  300

seq1  CTAAGCTAAATCAGTGGGCGAATGTCACTGCAGCAAACCCTGATTGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTAAATCAGTGGGCGAATGTCACTGCAGCAAACCCTGATTGCAAG  350

seq1  GATGTTTGGGAGGATTCAAAATGTTAATTTTTGCAAGAGCTAGGATAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTGGGAGGATTCAAAATGTTAATTTTTGCAAGAGCTAGGATAAGA  400

seq1  GAGACTTTTCTGACTGGTTTACATGGGCACTTGATGAAAGCCCTCATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTTCTGACTGGTTTACATGGGCACTTGATGAAAGCCCTCATTAA  450

seq1  CCCTTTCCTGCAAGGCTTAAGGTCTGGTTAGATGGTTGTTCCCTGTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCTGCAAGGCTTAAGGTCTGGTTAGATGGTTGTTCCCTGTGGCA  500

seq1  GGAAAACCACAACTGCCAGCAACTTGGGGGAGCACTCTGACCTGTAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACCACAACTGCCAGCAACTTGGGGGAGCACTCTGACCTGTAATTG  550

seq1  CTTGAGTTCTGGCTGCACCTACACCTCTTGGGTGATTTATACAGTGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTCTGGCTGCACCTACACCTCTTGGGTGATTTATACAGTGTGAG  600

seq1  GATTTTTCCAACCATACCTACAAACGTTCCAGAGTTATACACAGAGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCCAACCATACCTACAAACGTTCCAGAGTTATACACAGAGATGG  650

seq1  TATTTGTCTTAGATAAGAGTAGTAACTATGTTACCATTTTCCTTCCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTCTTAGATAAGAGTAGTAACTATGTTACCATTTTCCTTCCTCTA  700

seq1  TTGTTAATAACCGCCATCCTTGCTTTTCAAAATTGTAGAGTGTTTGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATAACCGCCATCCTTGCTTTTCAAAATTGTAGAGTGTTTGCTTG  750

seq1  TTTTGTTCTGTCTCATTTTGGGTGACAGGAAGCAAGATATTCCAGAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCTGTCTCATTTTGGGTGACAGGAAGCAAGATATTCCAGAGTAT  800

seq1  TTTGTCAACTAAAAGTGAATTTCTTACTGAACATCGGCATCTCGGGTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAACTAAAAGTGAATTTCTTACTGAACATCGGCATCTCGGGTTCC  850

seq1  TATTTTGCCTTTGTCCTCTTGCTCTGATGAGCCATTTCAAAACAGGAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCCTTTGTCCTCTTGCTCTGATGAGCCATTTCAAAACAGGAATG  900

seq1  AGCAGGTAAGACGTCATAGCACACTGTATTTAGTTTAGGTTCCGGCTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAAGACGTCATAGCACACTGTATTTAGTTTAGGTTCCGGCTTCC  950

seq1  TCTCAAACAAGGGTCTGGACTCCCTGTGCATGTGAGTTGTGCGGCTGACC  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTC-AACAAGGGTCTGGACTCCCTGTGCATGTGAGTTGTGCGGCTGACC  999

seq1  CTGTATCAGCCTGAGTATGACT-GGGGAGTG-CTCCTGCAGTGCTCAGTA  1048
      ||||||||| |||||||||||| |||||||| ||||||||||||||||| 
seq2  CTGTATCAG-CTGAGTATGACTGGGGGAGTGCCTCCTGCAGTGCTCAGT-  1047

seq1  AGGACACAAGGGGATCCCCCCA-TCATCAATCACGGAAGGGAGGAATCTC  1097
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  AGGACACAAGGGGATCCCCCCATTCATCAATCACGGAAGGGAGG-ATCTC  1096

seq1  AAAATCCTCT--CCCCTAAACTCACTGAGGAACCTGCTAGC-TTCAGCCT  1144
      ||| ||||||  ||| |||||||||||| |||| ||||||| ||||||||
seq2  AAATTCCTCTTCCCCTTAAACTCACTGAAGAACTTGCTAGCTTTCAGCCT  1146

seq1  GGAAATGCCACTGTGTTTGGAAGGGGAAGGACTGCAGCTGAGTCCTTTGA  1194
      |  ||||||||||||||  | ||||||| ||||||| |||| | ||||||
seq2  G--AATGCCACTGTGTT--GGAGGGGAA-GACTGCA-CTGAAT-CTTTGA  1189

seq1  CTTGAAGCTGCAG  1207
      | |||||||||||
seq2  CCTGAAGCTGCAG  1202

seq1: chr2_70137257_70137810
seq2: B6Ng01-190E17.g_129_685 (reverse)

seq1  TAGCTCCCCTTCATTAAGTTTAAAGATGCCCTC-ACGTTTAG-ATCCTCC  48
      ||||||||||||| ||| ||||||||||||||| |||||||| |||||||
seq2  TAGCTCCCCTTCAATAAATTTAAAGATGCCCTCAACGTTTAGAATCCTCC  50

seq1  TCTTCTTGCCATGTTACTTGGTTATCTCAGATAG-TTTCTGTGAGCTGCA  97
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  TCTTCTTGCCAAGTTACTTGGTTATCTCAGATAGTTTTCTGTGAGCTGCA  100

seq1  GAGAGGGTGGAGATCTGGACTCTATAGTTATAAATTGGTTGTTTCTAATG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGTGGAGATCTGGACTCTATAGTTATAAATTGGTTGTTTCTAATG  150

seq1  TCTTTCCTGCACACGTGCTCATGGTCTATCTCCTCTCATGGTGGCCTTCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTGCACACGTGCTCATGGTCTATCTCCTCTCATGGTGGCCTTCT  200

seq1  CCACCCCACACTCACCCATGTCTTCCCCTCTTTCCTCCTTCTCTCTACCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACACTCACCCATGTCTTCCCCTCTTTCCTCCTTCTCTCTACCT  250

seq1  CCTTGCACTCTCCTCACTTAATCTTTAAGCCCCACCTGTCTCCCTCTATC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCACTCTCCTCACTTAATCTTTAAGCCCCACCTGTCTCCCTCTATC  300

seq1  ACCCAATCACAGGCTCTAGCCTTTTATCGAGCAGTTAAATCAGGGAGCAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATCACAGGCTCTAGCCTTTTATCGAGCAGTTAAATCAGGGAGCAA  350

seq1  GATTCACGTAGCATCACTTGGTGTGCAAGAGGATCTGCTTATCTGGGGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACGTAGCATCACTTGGTGTGCAAGAGGATCTGCTTATCTGGGGGC  400

seq1  AACCAGATCTTGAAAGCCAGTATTAGCAGCTCTCAAGACCAACCCATTAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGATCTTGAAAGCCAGTATTAGCAGCTCTCAAGACCAACCCATTAC  450

seq1  ACGTGGACCCCAGTTGATTGCCCTGGTTTAGAAGGTTTAGTGGGCACCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGACCCCAGTTGATTGCCCTGGTTTAGAAGGTTTAGTGGGCACCTT  500

seq1  GCTCGAGGAAGGTATGGCACTGGGGTGAAATTTGAAAGCTTTAACCCCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGAGGAAGGTATGGCACTGGGGTGAAATTTGAAAGCTTTAACCCCCA  550

seq1  CCCTCCG  554
      |||||||
seq2  CCCTCCG  557