BAC Information

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BAC

Clone NameB6Ng01-190H22
Chromosome2 (Build37)
Map Location 41,103,407 - 41,104,570
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC666531, LOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190H22.bB6Ng01-190H22.g
ACCGA014236GA014237
length1,0141,155
definitionB6Ng01-190H22.b B6Ng01-190H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtgaaaattaagttcaatatatcactaagtgcctccataaaga
cattagtaagttctcatactagtaatttaaacctacacctgaaagctgta
aaacaaaagagatgaatcaagcagaccaaaaaggagtagaaggcaggaaa
taatcaaaatcagggctgaaatcaatcagttagaaacaaacaaacaaaca
aacaaacaaataacactataaaaccaacaataccaaaagctagttctttg
agaaaatcaatgtagacaaacccttagctaaactaaccaaaagacagaga
ggcagtaatcaataaacaaaatcaagccagacagtggtggtgaatgcctt
taatcccagcacttgggaggcagaggcaggcatatttcgaagttcaagtc
tacagagtaagttccagtacagccagggctacacagagaaaccctgtctt
ggaaaacaaaaccgaacaaaacaaaacaaaacaaaaatcagaaatgaaaa
gggagacataacagacataaacagcagatactgagataattcaaagaatc
attacttacttcaaaagcctgtaatccatgaaattggagaattataatga
aaaaatggttttctagacagaatttaccaaagtcaaaccatgatcaggga
aactatttaaacagccctataaccctgaaagaaactgatgtagtcattaa
gattcccaacacacacacacacacacacacacacacacacacacacacac
acacacacaaacacacacacacaagtccaacgcccaaggccagatcgtta
tagagcagaattctaccagacattcaaagacgagctaataccaatactca
tcaaattattccagaaaataaaaacaggagaaagactgccaaactcctca
ttctataaatccagaaccaccctgatacctaaattacacaaaagactcca
caaagagaacttcagactgattattatgatgaacattggatgcaaaaatc
tcaataaaatactt

gaattcagcagaaaatgaagtgacagttaggccactgaattctagtgtat
attattcaatctctgctcctggacagtacatgaacacagaaaagggactc
tgtcactatcagctgatattacggtatgcagaaaagatcatctgttaaca
gaaaatcacatttaagtaaatatattttataaactgtaatgtgcctaaaa
ggttttttccctgacattgaggcatactcacacatgaataattcattatt
aattacacatgtgtttatttaatttgtactagctcagactgaattataaa
tgtatacctgttgagcaagtggtctaccctaaggtactctctcagcacta
caaactgactgactaattttgttttgaaaaggtcttgttatgcatcccag
aaaaactgcaaacttgaaaccatttgcccaggtcttttaaatagtgagat
taaaagtggaggccagggagatggggtaagaaagataactcagtaactaa
agttggtgtcatccaagtttgagaacttaagtcctgcttagccatgtgta
aggggcagcatgacatgcttcctgtcctgtaaaggagccagcatgtcatg
gttgcgtgggcataggcttgtttttataataatgtacatatttttgtgtt
cctccttcgaggaatatcctttctgccaaggttaatgacttcatgataat
cagaaacagatgagtatggcaagcaagggcatgtctatttctcagcaaaa
tggtagaaagctgtgaccttcaggatatcatatatgtatatatatatagt
ttctcaactatgcaaaatataaggatacaatatcctataaggatcttcac
agatctaaaggaacagatgcagctgcactgtgactcagcttgtcataaag
atactaggtaaaggagataaagagacttagggagtgatggaggcaagaca
gatcccacccagctaactttcttgttgtgagcctagcctttaatgaccga
gacatctctcagccctgagctgtccaggcagaagggacctcatgtatacc
agaacagaggttaaggagaccaggtagtatatttacttattaattccagt
actgaaagccaggaatggttgaattatgccagtcctatactatatggtca
gctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41103407_41104570
seq2: B6Ng01-190H22.g_65_1219

seq1  GAATTCAGCAGAAAATGAAGTGACAGTTAGGCCACTGAATTCTAGTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAAAATGAAGTGACAGTTAGGCCACTGAATTCTAGTGTAT  50

seq1  ATTATTCAATCTCTGCTCCTGGACAGTACATGAACACAGAAAAGGGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAATCTCTGCTCCTGGACAGTACATGAACACAGAAAAGGGACTC  100

seq1  TGTCACTATCAGCTGATATTACGGTATGCAGAAAAGATCATCTGTTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTATCAGCTGATATTACGGTATGCAGAAAAGATCATCTGTTAACA  150

seq1  GAAAATCACATTTAAGTAAATATATTTTATAAACTGTAATGTGCCTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCACATTTAAGTAAATATATTTTATAAACTGTAATGTGCCTAAAA  200

seq1  GGTTTTTTCCCTGACATTGAGGCATACTCACACATGAATAATTCATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTCCCTGACATTGAGGCATACTCACACATGAATAATTCATTATT  250

seq1  AATTACACATGTGTTTATTTAATTTGTACTAGCTCAGACTGAATTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACATGTGTTTATTTAATTTGTACTAGCTCAGACTGAATTATAAA  300

seq1  TGTATACCTGTTGAGCAAGTGGTCTACCCTAAGGTACTCTCTCAGCACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACCTGTTGAGCAAGTGGTCTACCCTAAGGTACTCTCTCAGCACTA  350

seq1  CAAACTGACTGACTAATTTTGTTTTGAAAAGGTCTTGTTATGCATCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGACTGACTAATTTTGTTTTGAAAAGGTCTTGTTATGCATCCCAG  400

seq1  AAAAACTGCAAACTTGAAACCATTTGCCCAGGTCTTTTAAATAGTGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGCAAACTTGAAACCATTTGCCCAGGTCTTTTAAATAGTGAGAT  450

seq1  TAAAAGTGGAGGCCAGGGAGATGGGGTAAGAAAGATAACTCAGTAACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGGAGGCCAGGGAGATGGGGTAAGAAAGATAACTCAGTAACTAA  500

seq1  AGTTGGTGTCATCCAAGTTTGAGAACTTAAGTCCTGCTTAGCCATGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTGTCATCCAAGTTTGAGAACTTAAGTCCTGCTTAGCCATGTGTA  550

seq1  AGGGGCAGCATGACATGCTTCCTGTCCTGTAAAGGAGCCAGCATGTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGCATGACATGCTTCCTGTCCTGTAAAGGAGCCAGCATGTCATG  600

seq1  GTTGCGTGGGCATAGGCTTGTTTTTATAATAATGTACATATTTTTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGTGGGCATAGGCTTGTTTTTATAATAATGTACATATTTTTGTGTT  650

seq1  CCTCCTTCGAGGAATATCCTTTCTGCCAAGGTTAATGACTTCATGATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTCGAGGAATATCCTTTCTGCCAAGGTTAATGACTTCATGATAAT  700

seq1  CAGAAACAGATGAGTATGGCAAGCAAGGGCATGTCTATTTCTCAGCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAGATGAGTATGGCAAGCAAGGGCATGTCTATTTCTCAGCAAAA  750

seq1  TGGTAGAAAGCTGTGACCTTCAGGATATCATATATGTATATATATATAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAAAGCTGTGACCTTCAGGATATCATATATGTATATATATATAGT  800

seq1  TTCTCAACTATGCAAAATATAAGGATACAATATCCTATAAGGATCTTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACTATGCAAAATATAAGGATACAATATCCTATAAGGATCTTCAC  850

seq1  AGATCTAAAGGAACAGATGCAGCTGCACTGTGACTCAGCTTGTCATAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTAAAGGAACAGATGCAGCTGCACTGTGACTCAGCTTGTCATAAAG  900

seq1  ATACTAGGT-AAGGAGATAAAGAGACTTAGGGGAGTGATGGAGGCAAGAC  949
      ||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  ATACTAGGTAAAGGAGATAAAGAGACTTA-GGGAGTGATGGAGGCAAGAC  949

seq1  AAGATCCCACCCAGCTAACTTTCTTGGTTGTGAGCCTAGCCTTTAATGAC  999
       |||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  -AGATCCCACCCAGCTAACTTTCTT-GTTGTGAGCCTAGCCTTTAATGAC  997

seq1  CGAGACATCTCTCCAGCCCTGAGGCTGGTCCAGGCAG-AGGGACCTCAAT  1048
      |||||||||||| ||||||||| ||| |||||||||| ||||||||| ||
seq2  CGAGACATCTCT-CAGCCCTGA-GCT-GTCCAGGCAGAAGGGACCTC-AT  1043

seq1  GTAATAACCAGAACAGAGG-TAAAGAGACCAGGGTAGTAATATTTACTTA  1097
      |||   ||||||||||||| ||| ||||||| |||||| |||||||||||
seq2  GTA--TACCAGAACAGAGGTTAAGGAGACCA-GGTAGT-ATATTTACTTA  1089

seq1  -TAATCCCAGTAACATGAAAGCAAGGAATGGTTGATATATGGCCAGT-CT  1145
       |||| ||||||   ||||||| ||||||||||||  ||| |||||| ||
seq2  TTAATTCCAGTA--CTGAAAGCCAGGAATGGTTGAATTAT-GCCAGTCCT  1136

seq1  ATACTATATGGTCAGCTAT  1164
      |||||||||||||||||||
seq2  ATACTATATGGTCAGCTAT  1155


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