BAC Information

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BAC

Clone NameB6Ng01-190J08
Chromosome2 (Build37)
Map Location 89,365,898 - 89,367,007
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242
Downstream geneOlfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190J08.bB6Ng01-190J08.g
ACCGA014302GA014303
length9311,102
definitionB6Ng01-190J08.b B6Ng01-190J08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaactctgagat
tccacctcacactagtctgaatggctaagatcaaaaatttaggtgacccc
tcaacagaggaatggatacagaaaatgtggtacatctacacaatggagta
ctactcagctattaaaaagaatgaatttatgaaattcctagccaaatgga
tggacctggagggtatcatcctgagtgaggtaacacattcacaaaggaac
tcacacaatatgtactcactgataagtggatattagcctaaaacctagga
tacccaagatataagatacaatttcctaaacacatgaaactcaagaaaaa
tgaagacttaagtgtggacactatgcccctccttagaagtgggaacaaaa
cacccttggaaggagttacagagacaaagtttggagctgagatgaaagga
tggaccatgtagagactgccatatccagggatccaccccataatcagcat
ccaaacgctgacaccattgcatacactagcaagattttatcgaaaggacc
cagatgtagctgtctcttgtgagactatgccggggcctagcaaacacaga
agtggatgctcacagtcagctaatggatggatcacagggctcccaatgga
ggagctagagaaagtagccaaggagctaaagggatctgcaaccctatagg
tggaacaacattatgaactaaccagtaccccggagctcttgactctagct
gcatatgtatcaaaagatggcctagtcggccatcactggaaagagaggcc
cattggacatgcaaactttatatgccccagtacaggggaacgccagggcc
aaaaagggggagtgggtgggtagggggagtg
gaattcatctcccagagcaaggagcctagaacagtctaaatgtagttcca
tatgtatttctcgagtcatacaaaaatctttgggcttttacttttctgca
taattgccatctaatgtaaataaaatgaaatgaaataactactgtgacca
aatagtgactcaaatttttctaggaagaacatagggaaataacctaagac
aatggtaaatatgtggactctggatccataacgattgttacaaaattatt
tgtatgccatgaatttcatttattatcaaaaattaataaaagccacaaaa
tatattttaatgatacataaatgtgatgttaaactgattaagtttgtaaa
aaaaatacaaggatagcataagaaaggtacataaattatattcagtaatt
ttcacaataggtaatcccctttaaaattagaaatgagctacatacactac
agggaagtgtgattaataaaatatttctaaatgatgaaatttataagcac
aggttcatctatagctccagaattgttcttcttatgtatatgaattttct
atttgtcccatctagtgaatacttataaaactgtaggtaatacaactaaa
ctgtactgggagtgatgctaaaatagtagatttggctagatttacaaaga
agtaaacaatataaaaagcaacatgtgagatattgagaaaatgtaatttc
ttcattggagcaatctctttattatggattgtatgtttatcataacatca
cattgtagacttttaataacacattattattttattatataaagcaaacc
atatcaaagcataaatgcaactgtatgtaatgtttcatactggaatcaaa
ataatgttacatcactttttgatttgtgatctcctgaaatggttgaagac
tgaaaataaatttagtagttttttgttatttttacagaaaatacaaaata
aaatattgattatagcaaacaagtgcttttagtttgttaagtaaaattga
agtagcatgtacttttagtagctgcttatttacaacataagtgttcatta
ataaatcttcacacatttagatacatgagagaatacataatattgaaaat
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89365898_89367007
seq2: B6Ng01-190J08.g_65_1166

seq1  GAATTCATCTCCCAGAGCAAGGAGCCTAGAACAGTCTAAATGTAGTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCCCAGAGCAAGGAGCCTAGAACAGTCTAAATGTAGTTCCA  50

seq1  TATGTATTTCTCGAGTCATACAAAAATCTTTGGGCTTTTACTTTTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTCTCGAGTCATACAAAAATCTTTGGGCTTTTACTTTTCTGCA  100

seq1  TAATTGCCATCTAATGTAAATAAAATGAAATGAAATAACTACTGTGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCCATCTAATGTAAATAAAATGAAATGAAATAACTACTGTGACCA  150

seq1  AATAGTGACTCAAATTTTTCTAGGAAGAACATAGGGAAATAACCTAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGACTCAAATTTTTCTAGGAAGAACATAGGGAAATAACCTAAGAC  200

seq1  AATGGTAAATATGTGGACTCTGGATCCATAACGATTGTTACAAAATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTAAATATGTGGACTCTGGATCCATAACGATTGTTACAAAATTATT  250

seq1  TGTATGCCATGAATTTCATTTATTATCAAAAATTAATAAAAGCCACAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCATGAATTTCATTTATTATCAAAAATTAATAAAAGCCACAAAA  300

seq1  TATATTTTAATGATACATAAATGTGATGTTAAACTGATTAAGTTTGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAATGATACATAAATGTGATGTTAAACTGATTAAGTTTGTAAA  350

seq1  AAAAATACAAGGATAGCATAAGAAAGGTACATAAATTATATTCAGTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACAAGGATAGCATAAGAAAGGTACATAAATTATATTCAGTAATT  400

seq1  TTCACAATAGGTAATCCCCTTTAAAATTAGAAATGAGCTACATACACTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATAGGTAATCCCCTTTAAAATTAGAAATGAGCTACATACACTAC  450

seq1  AGGGAAGTGTGATTAATAAAATATTTCTAAATGATGAAATTTATAAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTGTGATTAATAAAATATTTCTAAATGATGAAATTTATAAGCAC  500

seq1  AGGTTCATCTATAGCTCCAGAATTGTTCTTCTTATGTATATGAATTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATCTATAGCTCCAGAATTGTTCTTCTTATGTATATGAATTTTCT  550

seq1  ATTTGTCCCATCTAGTGAATACTTATAAAACTGTAGGTAATACAACTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCCCATCTAGTGAATACTTATAAAACTGTAGGTAATACAACTAAA  600

seq1  CTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGAGTGATGCTAAAATAGTAGATTTGGCTAGATTTACAAAGA  650

seq1  AGTAAACAATATAAAAAGCAACATGTGAGATATTGAGAAAATGTAATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAATATAAAAAGCAACATGTGAGATATTGAGAAAATGTAATTTC  700

seq1  TTCATTGGAGCAATCTCTTTATTATGGATTGTATGTTTATCATAACATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGGAGCAATCTCTTTATTATGGATTGTATGTTTATCATAACATCA  750

seq1  CATTGTAGACTTTTAATAACACATTATTATTTTATTATATAAAGCAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGACTTTTAATAACACATTATTATTTTATTATATAAAGCAAACC  800

seq1  ATATCAAAGCATAAATGCAACTGTATGTAATGTTTCATACTGGAATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAAGCATAAATGCAACTGTATGTAATGTTTCATACTGGAATCAAA  850

seq1  ATAATGTTACATCACTTTTTGATTTGTGATCTCCTGAAATGGTTGAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTACATCACTTTTTGATTTGTGATCTCCTGAAATGGTTGAAGAC  900

seq1  TGAAAATAAATTTAGTAGTTTTTTGTTATTTTTACAGAAAATACAAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAAATTTAGTAGTTTTTTGTTATTTTTACAGAAAATACAAAATA  950

seq1  AAATATTGATTATAGCAAAACAAAGTGCTTTTAAGTTTGTTAAGTAAAAT  1000
      |||||||||||||||||||   |||||||||| |||||||||||||||||
seq2  AAATATTGATTATAGCAAA--CAAGTGCTTTT-AGTTTGTTAAGTAAAAT  997

seq1  TGAAGTAGCATGTAACTTTTAGTAAGCTTGCTATTTAC-ACATAAGTGTT  1049
      ||||||||||||| ||||||||| ||||   ||||||| |||||||||||
seq2  TGAAGTAGCATGT-ACTTTTAGT-AGCTGCTTATTTACAACATAAGTGTT  1045

seq1  CATTAATAAAATCTTCACCAACATTAAGATAACATGAGAG-ATACATATA  1098
      ||||||| ||||||||||  ||||| |||| ||||||||| ||||||| |
seq2  CATTAAT-AAATCTTCAC--ACATTTAGAT-ACATGAGAGAATACATA-A  1090

seq1  ATTTGAAAATAT  1110
        ||||||||||
seq2  TATTGAAAATAT  1102