BAC Information

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BAC

Clone NameB6Ng01-190O17
Chromosome2 (Build37)
Map Location 173,623,062 - 173,623,308
singlet/doubletsinglet
Overlap geneLOC620189
Upstream geneBmp7, LOC100043751, Spo11, Rae1, Rbm38, Ctcfl, EG619800, Pck1, Zbp1, Tmepai, 1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb
Downstream geneLOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5, Tubb1, Atp5e, Slmo2, LOC664967, LOC100043757, Edn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190O17.bB6Ng01-190O17.g
ACCGA014553GA014554
length433247
definitionB6Ng01-190O17.b B6Ng01-190O17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttagtttagttctataccccactttttgattgggttgtttggttttgtgg
tggctagcttcttgaatttttaacatattttagatactagccctgcagat
gttccactacagaagaatggatacagaaaatgtggttcatttacacaatg
gaatactactcagctattaagaaccaggatatcctgagttttgcaggcaa
atggatggaactagaagatattatcctgagtggagtaactcagacccaaa
aggacatgcatggtatttactcactaatatgtgggtattagccaaaaaaa
gaagttcagaagacccaagatacagtccacagaactcaaaaagctcaaca
agctgaagggcccaatcaaggatgccaaagtgccacttcagagggagaaa
aaagcaaccacaatgggggagggagggagagac
ctgttctcagctacccagtgtcacagcttcacatctgaaggctatttcag
tgtaagtgactttcatttaaagacaatgccttctatattttagttttgtt
ttctttcattcctttccttccttccttttttcctttcctttcctttcctt
tcctttcctttcctttcctttcctttcctttcctttcctttcctttcctt
tcctttcctttcctttcctttcctctcctctcctctcctctcctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_173623062_173623308
seq2: B6Ng01-190O17.g_75_321

seq1  CTGTTCTCAGCTACCCAGTGTCACAGCTTCACATCTGAAGGCTATTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTCAGCTACCCAGTGTCACAGCTTCACATCTGAAGGCTATTTCAG  50

seq1  TGTAAGTGACTTTCATTTAAAGACAATGCCTTCTATATTTTAGTTTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGACTTTCATTTAAAGACAATGCCTTCTATATTTTAGTTTTGTT  100

seq1  TTCTTTCATTCCTTTCCTTCCTTCCTTTTTTCCTTTCCTTTCCTTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATTCCTTTCCTTCCTTCCTTTTTTCCTTTCCTTTCCTTTCCTT  150

seq1  TCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTT  200

seq1  TCCTTTCCTTTCCTTTCCTTTCCTCTCCTCTCCTCTCCTCTCCTCTC  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTTTCCTTTCCTTTCCTCTCCTCTCCTCTCCTCTCCTCTC  247