BAC Information

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BAC

Clone NameB6Ng01-191C15
Chromosome2 (Build37)
Map Location 60,931,196 - 61,103,273
singlet/doubletdoublet
Overlap genenone
Upstream geneBaz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1, ENSMUSG00000075325
Downstream geneTank, Psmd14, Tbr1, LOC100039274, Slc4a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191C15.bB6Ng01-191C15.g
ACCGA014730GA014731
length1,144526
definitionB6Ng01-191C15.b B6Ng01-191C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,102,112 - 61,103,273)(60,931,196 - 60,931,721)
sequence
gaattccatttcattagattttttttaaaccacagatctgagtttaagcc
acagaactaacctgtcagtctccaaactctatatttgtcaatgaaactta
catgtaaggtcaagacagaatccctaactattatagcagatataaagaaa
tgtaataaatgaatgaacatagagggttttccttataagtttctggtttg
tgaagacaccaaagctgtgtagcaagcaggtaactgcaatagctgaacag
acttctgtggctgcctcaaggttgtgctccatcctggggaagctgggtct
tctcggggctaagagttttttaatcagaaaaacctggtgtgcaagtaaac
caagattccttctcaattagtctcaaactcactaaaatttgatatgggtg
ttaaaataagcgtaacttttatttcccgacatgacagaacacaggaaaat
gccacttggggcttcttcactaagttcaactctctgtacctccctcttct
gcatgcaaggctgcacttcagacagggtataagctttccgttttaatcac
tccagttttctctctttgagagaagctaatcttctcaaaagtagagtaat
gtttaatctcttcaatgaacaatgattcttaatctatcagaaggcaagta
attataaagacattctagagtctaaggaatataaagctggggccacctcg
aattctaaatcccgtttgagttcatctgtggcatatatatagccatgatt
gagatcaatgaaatctaatgaggtgtaaaacacaatttttacgtaggatt
atgctaactcttcttagacactggatttagtgactttgaggttaactgaa
ttttatggcagatattaagccagtccatttcattacattcagtcagtttt
aaattctctataaaagatatactttaaaatatatgcatatccttttttca
aagacttttcaatcatctgtttttctagatatgtatttatttattattat
ttatttatattttagaatcagaaacaataaagcagattccaagttgttgg
aaacctagcaaattgagaacaagaagtacacattctctgaaatatcttgc
cactgaacatctcttctgggccttcgacaagccacatctctgtc
gaattcagactgcattagaaataaaattctaggttctttccagcttctgg
ctattataaataaggctgctatgaacatagtggagcatgtgtccttctta
cctgttggggcatcttctggatatatgcccaggagaggtattgctggatc
ctccagaggaatggatacagaaaatgtggtacatctacacaatggagtac
tactcagctattaaaaagaatgaatttatgaagttcctagccaaatggat
ggacctggagggcatcatcctgagtgaggtaacacattcacaaagaaact
cacacaatatgtattcactgataagtggatattagccccaaacctaggat
acccaagatataagatataatttgttaaacacatgaaactcaagaagaat
gaagactgaagtgtggacactatgcccctccttagatttgggaacaagac
acccatggaaggagttacagagccaaagtttggagctgagatgaaaggat
ggaccatgtagagactgccatatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61102112_61103273
seq2: B6Ng01-191C15.b_42_1185 (reverse)

seq1  GACAGAGATGGTGGCTTTGGTGCGAAAG-CCAGAGAGA-ATGTTTCCAGT  48
      ||||||||| |||||||  || |||| | ||||| ||| |||||  ||||
seq2  GACAGAGAT-GTGGCTT--GT-CGAAGGCCCAGA-AGAGATGTT--CAGT  43

seq1  GGC-AGATATTTCAGAG-ATGTGTACTTTCTTGTTCTCATTTTTGCTTAG  96
      ||| ||||||||||||| |||||||| ||||||||||||  ||||| |||
seq2  GGCAAGATATTTCAGAGAATGTGTAC-TTCTTGTTCTCA-ATTTGC-TAG  90

seq1  GTTTTCCAACAAACTTTGGAATCCTGCTTTATTTGTTTCTTGATTTCTAA  146
      | ||||||||||   ||||||| |||||||| ||||||| ||| |||| |
seq2  G-TTTCCAACAA--CTTGGAAT-CTGCTTTA-TTGTTTC-TGA-TTCT-A  132

seq1  AAATATAAATAAATAAATAAATAAATAAATACATATTCTAGAAAAACAGA  196
      ||||||||||||||||   |||||||||||||||| ||||||||||||||
seq2  AAATATAAATAAATAA--TAATAAATAAATACATA-TCTAGAAAAACAGA  179

seq1  TGATTTGAAAAGTCTTTGAAAAAAGGATATGCATATATTTTAAAGTATAT  246
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGA-TTGAAAAGTCTTTGAAAAAAGGATATGCATATATTTTAAAGTATAT  228

seq1  CTTTTATAGAGAATTTAAAACTGACTGAATGTAATGAAATGGACTGGCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATAGAGAATTTAAAACTGACTGAATGTAATGAAATGGACTGGCTT  278

seq1  AATATCTGCCATAAAATTCAGTTAACCTCAAAGTCACTAAATCCAGTGTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGCCATAAAATTCAGTTAACCTCAAAGTCACTAAATCCAGTGTC  328

seq1  TAAGAAGAGTTAGCATAATCCTACGTAAAAATTGTGTTTTACACCTCATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAGTTAGCATAATCCTACGTAAAAATTGTGTTTTACACCTCATT  378

seq1  AGATTTCATTGATCTCAATCATGGCTATATATATGCCACAGATGAACTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCATTGATCTCAATCATGGCTATATATATGCCACAGATGAACTCA  428

seq1  AACGGGATTTAGAATTCGAGGTGGCCCCAGCTTTATATTCCTTAGACTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGGATTTAGAATTCGAGGTGGCCCCAGCTTTATATTCCTTAGACTCT  478

seq1  AGAATGTCTTTATAATTACTTGCCTTCTGATAGATTAAGAATCATTGTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCTTTATAATTACTTGCCTTCTGATAGATTAAGAATCATTGTTC  528

seq1  ATTGAAGAGATTAAACATTACTCTACTTTTGAGAAGATTAGCTTCTCTCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAGATTAAACATTACTCTACTTTTGAGAAGATTAGCTTCTCTCA  578

seq1  AAGAGAGAAAACTGGAGTGATTAAAACGGAAAGCTTATACCCTGTCTGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAAACTGGAGTGATTAAAACGGAAAGCTTATACCCTGTCTGAA  628

seq1  GTGCAGCCTTGCATGCAGAAGAGGGAGGTACAGAGAGTTGAACTTAGTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCCTTGCATGCAGAAGAGGGAGGTACAGAGAGTTGAACTTAGTGA  678

seq1  AGAAGCCCCAAGTGGCATTTTCCTGTGTTCTGTCATGTCGGGAAATAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCCAAGTGGCATTTTCCTGTGTTCTGTCATGTCGGGAAATAAAA  728

seq1  GTTACGCTTATTTTAACACCCATATCAAATTTTAGTGAGTTTGAGACTAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACGCTTATTTTAACACCCATATCAAATTTTAGTGAGTTTGAGACTAA  778

seq1  TTGAGAAGGAATCTTGGTTTACTTGCACACCAGGTTTTTCTGATTAAAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGGAATCTTGGTTTACTTGCACACCAGGTTTTTCTGATTAAAAA  828

seq1  ACTCTTAGCCCCGAGAAGACCCAGCTTCCCCAGGATGGAGCACAACCTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGCCCCGAGAAGACCCAGCTTCCCCAGGATGGAGCACAACCTTG  878

seq1  AGGCAGCCACAGAAGTCTGTTCAGCTATTGCAGTTACCTGCTTGCTACAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCCACAGAAGTCTGTTCAGCTATTGCAGTTACCTGCTTGCTACAC  928

seq1  AGCTTTGGTGTCTTCACAAACCAGAAACTTATAAGGAAAACCCTCTATGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGTGTCTTCACAAACCAGAAACTTATAAGGAAAACCCTCTATGT  978

seq1  TCATTCATTTATTACATTTCTTTATATCTGCTATAATAGTTAGGGATTCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTTATTACATTTCTTTATATCTGCTATAATAGTTAGGGATTCT  1028

seq1  GTCTTGACCTTACATGTAAGTTTCATTGACAAATATAGAGTTTGGAGACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGACCTTACATGTAAGTTTCATTGACAAATATAGAGTTTGGAGACT  1078

seq1  GACAGGTTAGTTCTGTGGCTTAAACTCAGATCTGTGGTTTAAAAAAAATC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTTAGTTCTGTGGCTTAAACTCAGATCTGTGGTTTAAAAAAAATC  1128

seq1  TAATGAAATGGAATTC  1162
      ||||||||||||||||
seq2  TAATGAAATGGAATTC  1144

seq1: chr2_60931196_60931721
seq2: B6Ng01-191C15.g_67_592

seq1  GAATTCAGACTGCATTAGAAATAAAATTCTAGGTTCTTTCCAGCTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTGCATTAGAAATAAAATTCTAGGTTCTTTCCAGCTTCTGG  50

seq1  CTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTA  100

seq1  CCTGTTGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATC  150

seq1  CTCCAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTAC  200

seq1  TACTCAGCTATTAAAAAGAATGAATTTATGAAGTTCCTAGCCAAATGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGCTATTAAAAAGAATGAATTTATGAAGTTCCTAGCCAAATGGAT  250

seq1  GGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACT  300

seq1  CACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT  350

seq1  ACCCAAGATATAAGATATAATTTGTTAAACACATGAAACTCAAGAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGATATAAGATATAATTTGTTAAACACATGAAACTCAAGAAGAAT  400

seq1  GAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAACAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAACAAGAC  450

seq1  ACCCATGGAAGGAGTTACAGAGCCAAAGTTTGGAGCTGAGATGAAAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGAAGGAGTTACAGAGCCAAAGTTTGGAGCTGAGATGAAAGGAT  500

seq1  GGACCATGTAGAGACTGCCATATCCA  526
      ||||||||||||||||||||||||||
seq2  GGACCATGTAGAGACTGCCATATCCA  526