BAC Information

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BAC

Clone NameB6Ng01-191E13
Chromosome2 (Build37)4 (Build37)
Map Location 32,594,678 - 32,594,75372,967,983 - 72,968,516
singlet/doubletsingletsinglet
Overlap geneSh2d3c
Upstream geneAbl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2, Pip5kl1, St6galnac4, St6galnac6, Ak1, Eng, Fpgs, Cdk9
Downstream geneTor2a, Ttc16, Ptrh1, 1700019L03Rik, Stxbp1, 9130404D14Rik, Lrsam1, Snora65, Slc2a8, Garnl3, Ralgps1, Angptl2, Zbtb34, Zbtb43, LOC676764, Lmx1b, LOC100041918, 2610528K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191E13.bB6Ng01-191E13.g
ACCGA014817GA014818
length74927
definitionB6Ng01-191E13.b B6Ng01-191E13.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,594,678 - 32,594,753)(72,967,983 - 72,968,516)
sequence
caggacagccagggctatacagagaaaccctgtttcgaaaaaaaaaagaa
agaaagaaagaaagaaagaaagaa
gaattcttcacagagagagggttactgaaacacttttggaaaagatctgc
actaaccctgcatctgacagagggttaatatccaaaatatgtaaaaaaaa
attcaagaagttagacatcaaaaagccaaatcattcagttaaaaaacagg
atgaaaagctgaacagacaattctcaacagatgaatttaggtgttgaaaa
gtacttaaataaatgttaaatattcttagtcgtcagggaaatggaaatca
aatcaccctgaaattccatctaacaccaaccagaatgtcaaagatcaaaa
actcaagcttcagcaatgaagatagatgtaaataaagaggaacgctcctc
cattgctggtgggattgcatacttacagccactttgaaaatcaatctgtt
agtttctcagaaaattggaaatagttctacctaaagacccaaccatacca
cttctggatattacccaaaagatcctccaacataccccaaggacacaagc
tccactatgttcatagcagctttatttgtaataaccagaaactggaaaca
accgaaaagtcccccaactggagttaatacataaaatatggttcctttac
acaatggaatactaattagctattaaaaacatggacttgagagcacaggt
gtcagcacagcccgggaggcttctgcctcacgttctgcgggggccacctt
ggttccaagaccccgcggcctgcagtctgcgggtgagagtgtggaacaca
gaggccagcagcttctggaacgggcaagagccacagagcctctgaggggg
cgccatttccggctccagacaaccggccaccttcctggtccagagcacag
gtgtccgcacagcccgggaggcttctgtctcacattccacgggggccacc
ttgattctgggactccgcagcaggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_32594678_32594753
seq2: B6Ng01-191E13.b_49_122

seq1  CAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAAAG  50
      ||||||||||||||||| ||||||||||||||| ||||||||  | ||||
seq2  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTTTCGAAAAA--AAAAAG  48

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAA  76
      ||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAA  74

seq1: chr4_72967983_72968516
seq2: B6Ng01-191E13.g_70_603

seq1  GAATTCTTCACAGAGAGAGGGTTACTGAAACACTTTTGGAAAAGATCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACAGAGAGAGGGTTACTGAAACACTTTTGGAAAAGATCTGC  50

seq1  ACTAACCCTGCATCTGACAGAGGGTTAATATCCAAAATATGTAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCCTGCATCTGACAGAGGGTTAATATCCAAAATATGTAAAAAAAA  100

seq1  ATTCAAGAAGTTAGACATCAAAAAGCCAAATCATTCAGTTAAAAAACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGAAGTTAGACATCAAAAAGCCAAATCATTCAGTTAAAAAACAGG  150

seq1  ATGAAAAGCTGAACAGACAATTCTCAACAGATGAATTTAGGTGTTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGCTGAACAGACAATTCTCAACAGATGAATTTAGGTGTTGAAAA  200

seq1  GTACTTAAATAAATGTTAAATATTCTTAGTCGTCAGGGAAATGGAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTAAATAAATGTTAAATATTCTTAGTCGTCAGGGAAATGGAAATCA  250

seq1  AATCACCCTGAAATTCCATCTAACACCAACCAGAATGTCAAAGATCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCCTGAAATTCCATCTAACACCAACCAGAATGTCAAAGATCAAAA  300

seq1  ACTCAAGCTTCAGCAATGAAGATAGATGTAAATAAAGAGGAACGCTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGCTTCAGCAATGAAGATAGATGTAAATAAAGAGGAACGCTCCTC  350

seq1  CATTGCTGGTGGGATTGCATACTTACAGCCACTTTGAAAATCAATCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTGGTGGGATTGCATACTTACAGCCACTTTGAAAATCAATCTGTT  400

seq1  AGTTTCTCAGAAAATTGGAAATAGTTCTACCTAAAGACCCAACCATACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCAGAAAATTGGAAATAGTTCTACCTAAAGACCCAACCATACCA  450

seq1  CTTCTGGATATTACCCAAAAGATCCTCCAACATACCCCAAGGACACAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGATATTACCCAAAAGATCCTCCAACATACCCCAAGGACACAAGC  500

seq1  TCCACTATGTTCATAGCAGCTTTATTTGTAATAA  534
      ||||||||||||||||||||||||||||||||||
seq2  TCCACTATGTTCATAGCAGCTTTATTTGTAATAA  534