BAC Information

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BAC

Clone NameB6Ng01-191L24
Chromosome2 (Build37)
Map Location 158,938,246 - 159,077,424
singlet/doubletdoublet
Overlap genenone
Upstream geneTgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5, Ppp1r16b, 2310007D09Rik, Dhx35, LOC100043891
Downstream geneLOC100043689
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191L24.bB6Ng01-191L24.g
ACCGA015165GA015166
length1,0561,157
definitionB6Ng01-191L24.b B6Ng01-191L24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(158,938,246 - 158,939,297)(159,076,277 - 159,077,424)
sequence
gaattcaaggcctgaggcacagatgcaattgcccagcaatgggaggacgg
tataaatactatatggtgaaataaatggaggtggagggggcagagatgac
tgactgtggcggacactgcaggtagtgagttaggggaagaaatgaacgca
caaaggtggaacttcagaagccacccagatgtgtgttgacgtactctcta
atgtcatgtagacttgagaacctctggttagcacagacttttccaaggtc
ctggtacaggaacactatccaagcttatttgttgcccaaggaaactttta
gagtgttctgcaatctcccagctcaactataaaataaacttggtaagagg
ttcaatttggcattgctaataagggactaggaggctacaagaaataattt
ttactgcactgcaccagggtgaagagtttcttcacactctttgcaaaata
acatcactagctcattatcatatgaagaggccaaaagtatgccatcaaca
aaaggtgggaaaaattattacagagctgcacttgtgtgtagttgataaaa
aggctgtattatacagtctcaacccatctgcctctgtcaggcattgacca
ctataatgagtccatcattctatttctgtgattataattttgaagtaaaa
agtcctttccaggtctttctctctcttggtgttaaggggtcatatcgggc
cctcagagatggtctcattccttggatatcagcactggggacattcagtc
acatggaggtagaggggtgttcagatacaagggcgggactctgtcttctc
accattcactctcatacaggatcttcatagtctaaagtaaatgagacaaa
agactgagagatttgcatgaagacagtgattggacacagacaggggcagg
ctgccctgaaagacaatcaccctaatagcaaggtaaatggactcatccct
gcactgaagcaagaaactgtaagcaggtcacagccataggctgtcatatg
gggcacccagattttcttgatcagtgggaacatttggaatcaattactgg
catatg
gaattcatgagcagcaaaggaggggtggtatgcaccctacactgtggctg
tggcaggtgccagaaacatctaaagggtaaagataagtggggaccgtcct
aaaggggaaagggaaggaggctggcttcactggtagcatgagcagctttg
tgagatataaccccacccccacgcctccctacagatttgaaagtcagaag
gtctctgctccatcccccgcctccatcagactccaggaagattcaattac
atttagagacatgatgtctgcctcccctggattaatttccggatcctgcc
aaagcttgtccttatctctttcttcttgctgagagtaagaaccctataaa
attgtctctatcaggaaccaagaaatgagccagggcaaggcaaacataag
aagcagtgcctgtgtctctcctcatttagattcaggaaggtcccacgcat
gacagctgactgcaggactctcacacctccattcagtctaaagggatcca
ttctgccagggtactgggtaggggcaggtcacactgtggacattagctat
atagtgatgcttgaactaaaagccatgctgtccctaacaatctctataag
accatcagtactaatgacagcagagagaacatttactgtgttcccaaaga
actgtgcccttctaatatatgtgtcttactgaatctatccgacagcccta
tacaggagttaattgcttacctccattttctggtagctggtaaggaggaa
acacagactctggcacgagcattaatgtacaatggccatctcaaaataaa
aaggtgaagtaatccaaggagtgaaaagtcatgactgaatttttacccac
agatgagttttgtggtttgtttgtttgttgtttgtttgtttattagtcat
gtcgcacacagttttttccttattcatcacatcttacagataaggaaaat
caaacctttattcaggggcttatccagcaaagagtagaggaattcaccat
ttgaacccaatattatacaggctcggaatgcatattcctaaaaccatcca
ctctttacatccatttggctgaaaagtatttttcagatggacagtggcct
ttgtaatgaggtaaaagaaccatgatgatggggtggacctgggtagtagg
ttatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_158938246_158939297
seq2: B6Ng01-191L24.b_44_1099

seq1  GAATTCAAGGCCTGAGGCACAGATGCAATTGCCCAGCAATGGGAGGACGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCTGAGGCACAGATGCAATTGCCCAGCAATGGGAGGACGG  50

seq1  TATAAATACTATATGGTGAAATAAATGGAGGTGGAGGGGGCAGAGATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATACTATATGGTGAAATAAATGGAGGTGGAGGGGGCAGAGATGAC  100

seq1  TGACTGTGGCGGACACTGCAGGTAGTGAGTTAGGGGAAGAAATGAACGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGGCGGACACTGCAGGTAGTGAGTTAGGGGAAGAAATGAACGCA  150

seq1  CAAAGGTGGAACTTCAGAAGCCACCCAGATGTGTGTTGACGTACTCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGGAACTTCAGAAGCCACCCAGATGTGTGTTGACGTACTCTCTA  200

seq1  ATGTCATGTAGACTTGAGAACCTCTGGTTAGCACAGACTTTTCCAAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATGTAGACTTGAGAACCTCTGGTTAGCACAGACTTTTCCAAGGTC  250

seq1  CTGGTACAGGAACACTATCCAAGCTTATTTGTTGCCCAAGGAAACTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACAGGAACACTATCCAAGCTTATTTGTTGCCCAAGGAAACTTTTA  300

seq1  GAGTGTTCTGCAATCTCCCAGCTCAACTATAAAATAAACTTGGTAAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTCTGCAATCTCCCAGCTCAACTATAAAATAAACTTGGTAAGAGG  350

seq1  TTCAATTTGGCATTGCTAATAAGGGACTAGGAGGCTACAAGAAATAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTGGCATTGCTAATAAGGGACTAGGAGGCTACAAGAAATAATTT  400

seq1  TTACTGCACTGCACCAGGGTGAAGAGTTTCTTCACACTCTTTGCAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCACTGCACCAGGGTGAAGAGTTTCTTCACACTCTTTGCAAAATA  450

seq1  ACATCACTAGCTCATTATCATATGAAGAGGCCAAAAGTATGCCATCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACTAGCTCATTATCATATGAAGAGGCCAAAAGTATGCCATCAACA  500

seq1  AAAGGTGGGAAAAATTATTACAGAGCTGCACTTGTGTGTAGTTGATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGGGAAAAATTATTACAGAGCTGCACTTGTGTGTAGTTGATAAAA  550

seq1  AGGCTGTATTATACAGTCTCAACCCATCTGCCTCTGTCAGGCATTGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTATTATACAGTCTCAACCCATCTGCCTCTGTCAGGCATTGACCA  600

seq1  CTATAATGAGTCCATCATTCTATTTCTGTGATTATAATTTTGAAGTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATGAGTCCATCATTCTATTTCTGTGATTATAATTTTGAAGTAAAA  650

seq1  AGTCCTTTCCAGGTCTTTCTCTCTCTTGGTGTTAAGGGGTCATATCGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTTCCAGGTCTTTCTCTCTCTTGGTGTTAAGGGGTCATATCGGGC  700

seq1  CCTCAGAGATGGTCTCATTCCTTGGATATCAGCACTGGGGACATTCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGATGGTCTCATTCCTTGGATATCAGCACTGGGGACATTCAGTC  750

seq1  ACATGGAGGTAGAGGGGTGTTCAGATACAAGGGCGGGACTCTGTCTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAGGTAGAGGGGTGTTCAGATACAAGGGCGGGACTCTGTCTTCTC  800

seq1  ACCATTCACTCTCATACAGGATCTTCATAGTCTAAAGTAAATGAGACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCACTCTCATACAGGATCTTCATAGTCTAAAGTAAATGAGACAAA  850

seq1  AGACTGAGAGATTTGCATGAAGACAGTGATT-GACACAGACAGGGGCAGG  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGACTGAGAGATTTGCATGAAGACAGTGATTGGACACAGACAGGGGCAGG  900

seq1  CTG-CCTGAAAGACAATCACCTTAATAGCAAGGTAAATGGACTCATCCCT  948
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGCCCTGAAAGACAATCACCCTAATAGCAAGGTAAATGGACTCATCCCT  950

seq1  GCACTGAAGCAAGAAACGCAAAGCAGGGCACAGCCATAGGCTGTCAATAG  998
      |||||||||||||||||   ||||||| ||||||||||||||||||   |
seq2  GCACTGAAGCAAGAAACTGTAAGCAGGTCACAGCCATAGGCTGTCATATG  1000

seq1  GGGCACACAGATTTTCCTGATCAAGTGGAACATTT-GAAACAATTACT-G  1046
      |||||| ||||||||| ||||||   ||||||||| ||| |||||||| |
seq2  GGGCACCCAGATTTTCTTGATCAGTGGGAACATTTGGAATCAATTACTGG  1050

seq1  CATATG  1052
      ||||||
seq2  CATATG  1056

seq1: chr2_159076277_159077424
seq2: B6Ng01-191L24.g_62_1218 (reverse)

seq1  ATTATAACTTACTACCCAGGT-CACCCCAT-ATCATGTGTCTTTTAACCT  48
      || ||||| |||||||||||| |||||||| ||||||  |||||| ||||
seq2  ATGATAACCTACTACCCAGGTCCACCCCATCATCATGGTTCTTTT-ACCT  49

seq1  CATAAACAAAGCCAACTGGTCAACCTGAAAAATAC-TCTCAG-CAAATGG  96
      |||  |||||| | ||| ||| | ||||||||||| | |||| |||||||
seq2  CAT-TACAAAGGCCACT-GTCCATCTGAAAAATACTTTTCAGCCAAATGG  97

seq1  AT-TGTAGAGT-GATGGTTTTAGGAA-ATGCATTCCGAAGCCTGTAT-AT  142
      || |  ||||| |||||||||||||| |||||||||| ||||||||| ||
seq2  ATGTAAAGAGTGGATGGTTTTAGGAATATGCATTCCG-AGCCTGTATAAT  146

seq1  ATT-GGTTCAAAT-GTGAATTCCTCTACTTCTTTGCTGGAT-AGCCCTTG  189
      ||| ||||||||| |||||||||||||| |||||||||||| ||||| ||
seq2  ATTGGGTTCAAATGGTGAATTCCTCTAC-TCTTTGCTGGATAAGCCCCTG  195

seq1  A--TAAGGTTTGATTTTCCTTATCTGTAAGATGGTGATG-ATAAGG-AAA  235
      |   |||||||||||||||||||||||||||| |||||| |||||| |||
seq2  AATAAAGGTTTGATTTTCCTTATCTGTAAGAT-GTGATGAATAAGGAAAA  244

seq1  AACTGTGTGCGACATGACTAATAAACAAACAAACAACAAACAAACAAACC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTGCGACATGACTAATAAACAAACAAACAACAAACAAACAAACC  294

seq1  ACAAAACTCATCTGTGGGTAAAAATTCAGTCATGACTTTTCACTCCTTGG  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTCATCTGTGGGTAAAAATTCAGTCATGACTTTTCACTCCTTGG  344

seq1  ATTACTTCACCTTTTTATTTTGAGATGGCCATTGTACATTAATGCTCGTG  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCACCTTTTTATTTTGAGATGGCCATTGTACATTAATGCTCGTG  394

seq1  CCAGAGTCTGTGTTTCCTCCTTACCAGCTACCAGAAAATGGAGGTAAGCA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCTGTGTTTCCTCCTTACCAGCTACCAGAAAATGGAGGTAAGCA  444

seq1  ATTAACTCCTGTATAGGGCTGTCGGATAGATTCAGTAAGACACATATATT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTCCTGTATAGGGCTGTCGGATAGATTCAGTAAGACACATATATT  494

seq1  AGAAGGGCACAGTTCTTTGGGAACACAGTAAATGTTCTCTCTGCTGTCAT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCACAGTTCTTTGGGAACACAGTAAATGTTCTCTCTGCTGTCAT  544

seq1  TAGTACTGATGGTCTTATAGAGATTGTTAGGGACAGCATGGCTTTTAGTT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGATGGTCTTATAGAGATTGTTAGGGACAGCATGGCTTTTAGTT  594

seq1  CAAGCATCACTATATAGCTAATGTCCACAGTGTGACCTGCCCCTACCCAG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATCACTATATAGCTAATGTCCACAGTGTGACCTGCCCCTACCCAG  644

seq1  TACCCTGGCAGAATGGATCCCTTTAGACTGAATGGAGGTGTGAGAGTCCT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGGCAGAATGGATCCCTTTAGACTGAATGGAGGTGTGAGAGTCCT  694

seq1  GCAGTCAGCTGTCATGCGTGGGACCTTCCTGAATCTAAATGAGGAGAGAC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGCTGTCATGCGTGGGACCTTCCTGAATCTAAATGAGGAGAGAC  744

seq1  ACAGGCACTGCTTCTTATGTTTGCCTTGCCCTGGCTCATTTCTTGGTTCC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCACTGCTTCTTATGTTTGCCTTGCCCTGGCTCATTTCTTGGTTCC  794

seq1  TGATAGAGACAATTTTATAGGGTTCTTACTCTCAGCAAGAAGAAAGAGAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAGACAATTTTATAGGGTTCTTACTCTCAGCAAGAAGAAAGAGAT  844

seq1  AAGGACAAGCTTTGGCAGGATCCGGAAATTAATCCAGGGGAGGCAGACAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAGCTTTGGCAGGATCCGGAAATTAATCCAGGGGAGGCAGACAT  894

seq1  CATGTCTCTAAATGTAATTGAATCTTCCTGGAGTCTGATGGAGGCGGGGG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTCTAAATGTAATTGAATCTTCCTGGAGTCTGATGGAGGCGGGGG  944

seq1  ATGGAGCAGAGACCTTCTGACTTTCAAATCTGTAGGGAGGCGTGGGGGTG  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCAGAGACCTTCTGACTTTCAAATCTGTAGGGAGGCGTGGGGGTG  994

seq1  GGGTTATATCTCACAAAGCTGCTCATGCTACCAGTGAAGCCAGCCTCCTT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATATCTCACAAAGCTGCTCATGCTACCAGTGAAGCCAGCCTCCTT  1044

seq1  CCCTTTCCCCTTTAGGACGGTCCCCACTTATCTTTACCCTTTAGATGTTT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCCCTTTAGGACGGTCCCCACTTATCTTTACCCTTTAGATGTTT  1094

seq1  CTGGCACCTGCCACAGCCACAGTGTAGGGTGCATACCACCCCTCCTTTGC  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACCTGCCACAGCCACAGTGTAGGGTGCATACCACCCCTCCTTTGC  1144

seq1  TGCTCATGAATTC  1148
      |||||||||||||
seq2  TGCTCATGAATTC  1157