BAC Information

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BAC

Clone NameB6Ng01-191N19
Chromosome2 (Build37)16 (Build37)
Map Location 138,279,577 - 138,280,61648,395,578 - 48,395,921
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBtbd3
Downstream geneLOC628103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191N19.bB6Ng01-191N19.g
ACCGA015251GA015252
length1,042344
definitionB6Ng01-191N19.b B6Ng01-191N19.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(138,279,577 - 138,280,616)(48,395,578 - 48,395,921)
sequence
gaattcagggatcaaaaagcgtggaaaaatttgaatgtcatgtcgagctg
gtatcggcttctggaacaccgaaaggatctctcatctcggctccatcctt
tgtgcttgtgggatcatccaccacatccacaggggcaactggatcaggag
cctcattcttgctgcatctcaccaatctctccggcacccaaagaggttcc
gtctggtcctgtggaaacacacaaacagaccctctcacccacgtcaacac
ctgatcctgtcgatccccaggggggatggacacaatacctcgtggtgatg
agaccataacctcaatcacctgtgtgtccatctggggagtcaatatgaga
gtcaagttttcactagcttcccctctgttaggcaatgatttccacgccct
tatagcaatctgattcacctgctcaaacacctgcactggatatcctgtct
gttgttgtgcaaatctaccttgatcaagcagcatatctctatcccatgca
aatttagcttgatcagtgaaaataggacatcccagcaaggagaatctatc
ctctttccagacctccggacagaaggtctgcccatagatggctgacgagg
aggcatagggagggggagcaaaagctaattcgccttcctcctctgcctca
actcttttattttgtcctttctgtccacctgataacactgtgtctccttt
ctttttcctttttctttttaagcccttctcctcttccgacatattttctt
gttgctctataaggattttctgacctgtcttgactgcctcttgatttcaa
acagtaacagagtccatatatcagaacaaacaagaccaaaactatcagac
ctacccacaaagggtcaatgggagaaaaaagcataactacacagcgagga
tctattgatcactacactgaggttatcatagttccttaacttgtcccaaa
gccgggaacctttcgttaccttggtgcctgctttcctggcaacttttatg
cttgccttctatttttatccgaaggttcttccaaactcctgg
gaattctggagggtggaaagtccagaacaccattaagggtctggctgaac
ttcggcctgtttgtctactagccctataaaaaaggtggagatgcataggt
agaactcagggtgtatagtaagaactaactagtaccctcagagctccctg
ggactaaaccaccaatcaaagaaaacacatggtgggactcatggctctag
ctgtgtatgtagcagaggatggcctagtcggtcatcaatgggaggagagg
cccttggtcctgtgaaggttctatgccccagtttaggggaataccagggc
cagggagcaggagtgggtaggttggggagcaggggaagggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_138279577_138280616
seq2: B6Ng01-191N19.b_47_1067

seq1  GAATTCAGGGATCAAAAAGCGTGGAAAAATTTGAATGTCATGTCGAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGATCAAAAAGCGTGGAAAAATTTGAATGTCATGTCGAGCTG  50

seq1  GTATCGGCTTCTGGAATACCGAAAGGATCTCTCATCACGGCTCCATCCTT  100
      |||||||||||||||| ||||||||||||||||||| |||||||||||||
seq2  GTATCGGCTTCTGGAACACCGAAAGGATCTCTCATCTCGGCTCCATCCTT  100

seq1  TGTGCTTGTGGGATCATCCACCACATCCACAGGGGCAACTGGATCAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTGCTTGTGGGATCATCCACCACATCCACAGGGGCAACTGGATCAGGAG  150

seq1  CCTCATTCTTGCAGCGTCTCACCAATCTCTCCGGCACCCAAAGAGGTTCC  200
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  CCTCATTCTTGCTGCATCTCACCAATCTCTCCGGCACCCAAAGAGGTTCC  200

seq1  ATCTGGTCCTGTGGAAACACACAAACAGACCCTCTCGCCCACGTCAACAC  250
       ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTCTGGTCCTGTGGAAACACACAAACAGACCCTCTCACCCACGTCAACAC  250

seq1  CTGATCTACTCGATCCCCAGGGGGGATGGACACAATACCTCGTGGTGATG  300
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCTGTCGATCCCCAGGGGGGATGGACACAATACCTCGTGGTGATG  300

seq1  AGACCATAACCTCAATCACCTCTGTGTCCATCTGGGGAGTCAATATGAGA  350
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGACCATAACCTCAATCACCTGTGTGTCCATCTGGGGAGTCAATATGAGA  350

seq1  GTCAAGTTTTCACTAGCTTCCCCTCTGTTAGGCAATGATTTCCACGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTTTCACTAGCTTCCCCTCTGTTAGGCAATGATTTCCACGCCCT  400

seq1  TATAGCAATCTGATTCACCTGCTCAAACACCTGCACTGGATATCCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAATCTGATTCACCTGCTCAAACACCTGCACTGGATATCCTGTCT  450

seq1  GTTGTTGTGCAAATCTACCTTGATCAAGCAGCATATCTCTATCCCATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTGCAAATCTACCTTGATCAAGCAGCATATCTCTATCCCATGCA  500

seq1  AATTTAGCTTGATGAGTGAAAATAGGACATCCCAGCAAGGAGAATCTATC  550
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCTTGATCAGTGAAAATAGGACATCCCAGCAAGGAGAATCTATC  550

seq1  CTCTTTCCAGACCTCCGGACAGAAGGTCTGCCCATAGATGGCTGACGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCAGACCTCCGGACAGAAGGTCTGCCCATAGATGGCTGACGAGG  600

seq1  AGGCATAGGGAGGGGGAGCAAAAGCTAATTCGCCTTCCTCCTCTGCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAGGGAGGGGGAGCAAAAGCTAATTCGCCTTCCTCCTCTGCCTCA  650

seq1  ACTCTTTTATTTTGTCCTTTCTGTCCACCTGATAACACTGTGTCTCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTATTTTGTCCTTTCTGTCCACCTGATAACACTGTGTCTCCTTT  700

seq1  CTTTTTCCTTTTTCTTTTTAAGCCCTTCTCCTCTTCCGACATATTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCTTTTTCTTTTTAAGCCCTTCTCCTCTTCCGACATATTTTCTT  750

seq1  GTTGCTCTATAAGGATTTTCTGACCTGTCTTGACTGCCTCTTGA-TTCAA  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTTGCTCTATAAGGATTTTCTGACCTGTCTTGACTGCCTCTTGATTTCAA  800

seq1  ACAGTAACAGAGTCCATATATCAGAACAAACAAGACCAAAACTATCAGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACAGAGTCCATATATCAGAACAAACAAGACCAAAACTATCAGAC  850

seq1  CTACCCACAAAGGGTCAATGGGAGAAAAAAGCATAACTACACAGCGAGGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACAAAGGGTCAATGGGAGAAAAAAGCATAACTACACAGCGAGGA  900

seq1  TCTATTGATCACTACACTGAGGTTATCATAGTTCCTTAACTTGTCCCCAA  949
      |||||||||||||||||||||||||||||||||                 
seq2  TCTATTGATCACTACACTGAGGTTATCATAGTT-----------------  933

seq1  ACCGGGAACCTTAACTTGTCCCAAAGCCGGGAACCTTTCGTTACCTT-GT  998
              ||||||||||||||||||||||||||||||||||||||| ||
seq2  --------CCTTAACTTGTCCCAAAGCCGGGAACCTTTCGTTACCTTGGT  975

seq1  GCCTGC-TTCCTGGCAAC-TTTATGCTTGCC-TCTA-TTTTATCCG  1040
      |||||| ||||||||||| |||||||||||| |||| |||||||||
seq2  GCCTGCTTTCCTGGCAACTTTTATGCTTGCCTTCTATTTTTATCCG  1021

seq1: chr16_48395578_48395921
seq2: B6Ng01-191N19.g_68_411

seq1  GAATTCTGGAGGGTGGAAAGTCCAGAACACCATTAAGGGTCTGGCTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGGGTGGAAAGTCCAGAACACCATTAAGGGTCTGGCTGAAC  50

seq1  TTCGGCCTGTTTGTCTACTAGCCCTATAAAAAAGGTGGAGATGCATAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCCTGTTTGTCTACTAGCCCTATAAAAAAGGTGGAGATGCATAGGT  100

seq1  AGAACTCAGGGTGTATAGTAAGAACTAACTAGTACCCTCAGAGCTCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGGGTGTATAGTAAGAACTAACTAGTACCCTCAGAGCTCCCTG  150

seq1  GGACTAAACCACCAATCAAAGAAAACACATGGTGGGACTCATGGCTCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAAACCACCAATCAAAGAAAACACATGGTGGGACTCATGGCTCTAG  200

seq1  CTGTGTATGTAGCAGAGGATGGCCTAGTCGGTCATCAATGGGAGGAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGTAGCAGAGGATGGCCTAGTCGGTCATCAATGGGAGGAGAGG  250

seq1  CCCTTGGTCCTGTGAAGGTTCTATGCCCCAGTTTAGGGGAATACCAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTCCTGTGAAGGTTCTATGCCCCAGTTTAGGGGAATACCAGGGC  300

seq1  CAGGGAGCAGGAGTGGGTAGGTTGGGGAGCAGGGGAAGGGGGAG  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGCAGGAGTGGGTAGGTTGGGGAGCAGGGGAAGGGGGAG  344