BAC Information

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BAC

Clone NameB6Ng01-191P22
Chromosome2 (Build37)
Map Location 51,299,113 - 51,439,974
singlet/doubletdoublet
Overlap geneLOC666810
Upstream geneLOC666781, LOC227885, Rnd3, LOC666802
Downstream geneLOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1, Rbm43, LOC100041634, Nmi, Tnfaip6, Rif1, Neb, LOC100041670, Arl5a, Cacnb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191P22.bB6Ng01-191P22.g
ACCGA015350GA015351
length1,0141,077
definitionB6Ng01-191P22.b B6Ng01-191P22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,438,962 - 51,439,974)(51,299,113 - 51,300,190)
sequence
gaattcagattcttaggtctcgatgatcctgtctttgcacatgtgtgatc
tgagtcagttgtttagattctcaaaataaaatgaagttgtctcattaggt
aagtgatgtcgtgccaaagcttgtctcagtttcctagtacccggctttgt
caggggtatcctaagcatgacacacactgaatcagtgactctttacatca
tgtaagaaaggaactgtagctctctgtatcccatagctgagaggttgtgg
gtaggggaggagcccagtgtaggtagtcaggctggaagaagccagagtgg
cctccactgaggtgtgttctgcatccttgagagctctgcaactgtgattc
tagaattctcttttagacacacactttctagaagggtttattcttcctgc
agtgaatttttggagtgagtataaacagaggaaagccagccctcctgccc
catctcaggaggattatgtaaaaactctgagctttctctggccgctgtat
tttgcctatgcagagcctatctggttagggatagcttgcctcactctctc
tcaagtgtggtgcaggaaccgcatcaagattttctgagcagtgtttcttt
acacttctgaaggtgagtatgcagaaacagagctagagaaactgcttttg
aaggctccttcctagatcaatgttgtttctcccatcagtctgcagtctgg
ttttgatgtcctggcatctgggcagaccctgggaagcattgctctgggcg
agtgcacccaagtggctgttccaaagtagactgtgaatggagctgagaag
gtactattcttagcagaaaagaaatgtctttaattgtttattaatttgta
tgggaaatagcatctctagctgtagtttcttttaaaaatttagtagtctg
gttacagccaagtaataatagtatacattctgcttttatgttgtatcagg
tatttagttattcatttcagtcctccatatatatatatatatatatatat
atatgtatattata
gaattccataaaatgatcatttggtaactggtagaaatgcaatgtgtaac
aatcaaattaagacgtgaacttaaattgttctggttgacttcccattgtt
ttggttaattcaacctatttcagtacagtgacattgttatctaacattga
tactggtgacaatattgtgaggaccgccaccaatcatttctagattatta
tctaaaataaatttttattattaaaactacctgcaactaagctttccctg
agcttattgcactcaggtgtggctgcattgcttgaatgcatagcagacac
aatgaatacctgcttgtatatattgggtgtgtattcatatgcacaaacac
ccagctgtgaccatcctcttagcaatgaaactcacatataagtatgattt
acattatctcttaggttagacagggttggagcttatacaagcatcacatg
actctcacacgggactatagaccaatgaagagagtaactgatagagagtc
cctgggcattgctagggactagaatactttgaagtatttcagcaagaatg
tattgacctccttggggaaaaggattatgtgtggcaatcagacatgatta
tctaatggtgaagatcaaagggcattgactgaaatctgcagttgccatag
ctactgagccccaagactttactatattctcttattacaagcgtgagatt
tacagttaagacctgcgtttttgacaagagaggttatctgttcactaaat
aggggagtttactagaatgatttccagcccacattgttttgccaaattga
atctgattcgatgaaattaaaatgcaatgttctcaaggcacacttcataa
cttactctaactctgtcaatctttttaagaagggaaaaataccttaagag
cagataggtcttagaggatagactctcatacggcattttaaagcgagcag
cttctcagttgactgcagctctgaaacagacattcagcagtgagcctgac
acgacccgcagcccagccgcagctcctaattattctcctccccacgagta
gtatggatatgttccccctggttgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_51438962_51439974
seq2: B6Ng01-191P22.b_43_1056 (reverse)

seq1  TATATATATATATATATATATATATATATATATATATATGGAGGACTG-A  49
      |||| ||||| ||||||||||||||||||||||||||||||||||||| |
seq2  TATA-ATATACATATATATATATATATATATATATATATGGAGGACTGAA  49

seq1  ATGAATAAACTAAATACCTGATACAACATAAAAGCAAAATGTATACTATT  99
      |||||| ||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGAAT-AACTAAATACCTGATACAACATAAAAGCAGAATGTATACTATT  98

seq1  ATTACTTGGCTGTTACCAGACTACT-AATTTTTAAAAGAAACTACAGCTA  148
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  ATTACTTGGCTGTAACCAGACTACTAAATTTTTAAAAGAAACTACAGCTA  148

seq1  GAGATGCTATTTCCCATAC-AATTAATAAACAATTAAAGACATTTCTTTT  197
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAGATGCTATTTCCCATACAAATTAATAAACAATTAAAGACATTTCTTTT  198

seq1  CTGCTAAGAATAGTACCTTCTCAGCTCCATTCACAGTCTACTTTGGAACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAGAATAGTACCTTCTCAGCTCCATTCACAGTCTACTTTGGAACA  248

seq1  GCCACTTGGGTGCACTCGCCCAGAGCAATGCTTCCCAGGGTCTGCCCAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTGGGTGCACTCGCCCAGAGCAATGCTTCCCAGGGTCTGCCCAGA  298

seq1  TGCCAGGACATCAAAACCAGACTGCAGACTGATGGGAGAAACAACATTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGACATCAAAACCAGACTGCAGACTGATGGGAGAAACAACATTGA  348

seq1  TCTAGGAAGGAGCCTTCAAAAGCAGTTTCTCTAGCTCTGTTTCTGCATAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAAGGAGCCTTCAAAAGCAGTTTCTCTAGCTCTGTTTCTGCATAC  398

seq1  TCACCTTCAGAAGTGTAAAGAAACACTGCTCAGAAAATCTTGATGCGGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCAGAAGTGTAAAGAAACACTGCTCAGAAAATCTTGATGCGGTT  448

seq1  CCTGCACCACACTTGAGAGAGAGTGAGGCAAGCTATCCCTAACCAGATAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACCACACTTGAGAGAGAGTGAGGCAAGCTATCCCTAACCAGATAG  498

seq1  GCTCTGCATAGGCAAAATACAGCGGCCAGAGAAAGCTCAGAGTTTTTACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCATAGGCAAAATACAGCGGCCAGAGAAAGCTCAGAGTTTTTACA  548

seq1  TAATCCTCCTGAGATGGGGCAGGAGGGCTGGCTTTCCTCTGTTTATACTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTCCTGAGATGGGGCAGGAGGGCTGGCTTTCCTCTGTTTATACTC  598

seq1  ACTCCAAAAATTCACTGCAGGAAGAATAAACCCTTCTAGAAAGTGTGTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAAAATTCACTGCAGGAAGAATAAACCCTTCTAGAAAGTGTGTGT  648

seq1  CTAAAAGAGAATTCTAGAATCACAGTTGCAGAGCTCTCAAGGATGCAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGAGAATTCTAGAATCACAGTTGCAGAGCTCTCAAGGATGCAGAA  698

seq1  CACACCTCAGTGGAGGCCACTCTGGCTTCTTCCAGCCTGACTACCTACAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTCAGTGGAGGCCACTCTGGCTTCTTCCAGCCTGACTACCTACAC  748

seq1  TGGGCTCCTCCCCTACCCACAACCTCTCAGCTATGGGATACAGAGAGCTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCCTCCCCTACCCACAACCTCTCAGCTATGGGATACAGAGAGCTA  798

seq1  CAGTTCCTTTCTTACATGATGTAAAGAGTCACTGATTCAGTGTGTGTCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTTTCTTACATGATGTAAAGAGTCACTGATTCAGTGTGTGTCAT  848

seq1  GCTTAGGATACCCCTGACAAAGCCGGGTACTAGGAAACTGAGACAAGCTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGATACCCCTGACAAAGCCGGGTACTAGGAAACTGAGACAAGCTT  898

seq1  TGGCACGACATCACTTACCTAATGAGACAACTTCATTTTATTTTGAGAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGACATCACTTACCTAATGAGACAACTTCATTTTATTTTGAGAAT  948

seq1  CTAAACAACTGACTCAGATCACACATGTGCAAAGACAGGATCATCGAGAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAACTGACTCAGATCACACATGTGCAAAGACAGGATCATCGAGAC  998

seq1  CTAAGAATCTGAATTC  1013
      ||||||||||||||||
seq2  CTAAGAATCTGAATTC  1014

seq1: chr2_51299113_51300190
seq2: B6Ng01-191P22.g_66_1142

seq1  GAATTCCATAAAATGATCATTTGGTAACTGGTAGAAATGCAATGTGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAATGATCATTTGGTAACTGGTAGAAATGCAATGTGTAAC  50

seq1  AATCAAATTAAGACGTGAACTTAAATTGTTCTGGTTGACTTCCCATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATTAAGACGTGAACTTAAATTGTTCTGGTTGACTTCCCATTGTT  100

seq1  TTGGTTAATTCAACCTATTTCAGTACAGTGACATTGTTATCTAACATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTAATTCAACCTATTTCAGTACAGTGACATTGTTATCTAACATTGA  150

seq1  TACTGGTGACAATATTGTGAGGACCGCCACCAATCATTTCTAGATTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTGACAATATTGTGAGGACCGCCACCAATCATTTCTAGATTATTA  200

seq1  TCTAAAATAAATTTTTATTATTAAAACTACCTGCAACTAAGCTTTCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATAAATTTTTATTATTAAAACTACCTGCAACTAAGCTTTCCCTG  250

seq1  AGCTTATTGCACTCAGGTGTGGCTGCATTGCTTGAATGCATAGCAGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATTGCACTCAGGTGTGGCTGCATTGCTTGAATGCATAGCAGACAC  300

seq1  AATGAATACCTGCTTGTATATATTGGGTGTGTATTCATATGCACAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATACCTGCTTGTATATATTGGGTGTGTATTCATATGCACAAACAC  350

seq1  CCAGCTGTGACCATCCTCTTAGCAATGAAACTCACATATAAGTATGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGTGACCATCCTCTTAGCAATGAAACTCACATATAAGTATGATTT  400

seq1  ACATTATCTCTTAGGTTAGACAGGGTTGGAGCTTATACAAGCATCACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATCTCTTAGGTTAGACAGGGTTGGAGCTTATACAAGCATCACATG  450

seq1  ACTCTCACACGGGACTATAGACCAATGAAGAGAGTAACTGATAGAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCACACGGGACTATAGACCAATGAAGAGAGTAACTGATAGAGAGTC  500

seq1  CCTGGGCATTGCTAGGGACTAGAATACTTTGAAGTATTTCAGCAAGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCATTGCTAGGGACTAGAATACTTTGAAGTATTTCAGCAAGAATG  550

seq1  TATTGACCTCCTTGGGGAAAAGGATTATGTGTGGCAATCAGACATGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACCTCCTTGGGGAAAAGGATTATGTGTGGCAATCAGACATGATTA  600

seq1  TCTAATGGTGAAGATCAAAGGGCATTGACTGAAATCTGCAGTTGCCATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGGTGAAGATCAAAGGGCATTGACTGAAATCTGCAGTTGCCATAG  650

seq1  CTACTGAGCCCCAAGACTTTACTATATTCTCTTATTACAAGCGTGAGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGCCCCAAGACTTTACTATATTCTCTTATTACAAGCGTGAGATT  700

seq1  TACAGTTAAGACCTGCGTTTTTGACAAGAGAGGTTATCTGTTCACTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTAAGACCTGCGTTTTTGACAAGAGAGGTTATCTGTTCACTAAAT  750

seq1  AGGGGAGTTTACTAGAATGATTTCCAGCCCACATTGTTTTGCCAAATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTTTACTAGAATGATTTCCAGCCCACATTGTTTTGCCAAATTGA  800

seq1  ATCTGATTCGATGAAATTAAAATGCAATGTTCTCAAGGCACACTTCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATTCGATGAAATTAAAATGCAATGTTCTCAAGGCACACTTCATAA  850

seq1  CTTACTCTAACTCTGTCAATCTTTTTAAGAAGGGAAAAAATACCTTAAGA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTACTCTAACTCTGTCAATCTTTTTAAGAAGGG-AAAAATACCTTAAGA  899

seq1  GCAAGATAGGTCTTAGAGGATAAGACTCTCATACGGCATTTTAAAGCGAG  950
      || |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GC-AGATAGGTCTTAGAGGAT-AGACTCTCATACGGCATTTTAAAGCGAG  947

seq1  CAGCTTCTCAGTTGACTGCAGCTCTGAAACAGACATTCAGCAGTGAGCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTCAGTTGACTGCAGCTCTGAAACAGACATTCAGCAGTGAGCCT  997

seq1  GACACGACACGGCAGCCCCAGCCGCAGCT-CTAA-TATTCTC--TCCCAC  1046
      |||||||| | |||| ||||||||||||| |||| |||||||   |||||
seq2  GACACGAC-CCGCAG-CCCAGCCGCAGCTCCTAATTATTCTCCTCCCCAC  1045

seq1  GAAGTAGTAT-GATATGTTCCCCCCTGGTGAGA  1078
      | |||||||| |||||||||||||  | |||||
seq2  G-AGTAGTATGGATATGTTCCCCCTGGTTGAGA  1077