BAC Information

Click to search

BAC

Clone NameB6Ng01-192C22
Chromosome2 (Build37)
Map Location 113,938,153 - 114,098,285
singlet/doubletdoublet
Overlap geneAqr, Zfp770
Upstream gene4930563P21Rik, Fmn1, Grem1, LOC100043520, Scg5, Arhgap11a, LOC100043526, Gja9, A530058N18Rik, Actc1
Downstream geneAtpbd4, LOC100043219, LOC100043222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192C22.bB6Ng01-192C22.g
ACCGA015484GA015485
length1,1371,038
definitionB6Ng01-192C22.b B6Ng01-192C22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,938,153 - 113,939,273)(114,097,254 - 114,098,285)
sequence
gaattccatagtacttcaggcaggcatatacaagataaactccaaagccg
cacgccctgtcttacctggtagaagtaagggttaggctccgactctccca
cgccctgaaagtcttccacgttgatgagctggaagtcatacagcaggccc
gcgttggctgtgctgaactctggcaggagctgcacatggggcaaattccc
taggtttttgtagcgccagttgtagaggttacacaagctgccccaagaca
aagaccccgaacacaaagattaacaagatgggacccttcagtatgcacaa
ggacattccaaggaaccacactgtttcagttttagtggccaaacttagtc
actaaaaaagatgattaatactttgggaactttaggctccttgctccaag
taatcaagagaggggattgaagatgttccaaagctggtagctctcctgtg
ctcccgtgtaaactactactatgtcatcaactacagagccaggaaggcct
gtaagcgcggacacaggaggacctgtgaagtggctggctttccttataac
attaagaatcagtgtcttccccttgttcacctttgctttaggttttatcg
ttatgttactatggttgtgtcttggagagaggataaagtgaatccttttc
aatcacttaatatcaatttaatgaagaaaacagtttatttggtcagtata
cagatttgtagagaaaagttcctaggtttgtagaggaggctaaaactttt
tgtaacagatctttcagggaacctatgttcttgacttggagtgactcctc
accttgccctggctctcccttgagcatcaaggtccacagtaggaactcca
acccggacgaagcgagtgaaaagagactgctccatgttggaatactttct
gaaaggccatgttcttaatgactggaggcaattggtggtgatcgccaatc
ataatccaccgtttccattcggctgaatcccgtcttgaggattctagaaa
cgacattgtgaaggagccaccaaagtagtcatttaatacattatggaccg
gtttcttagcctcacccacacccccaagaactgtttcatcagacggaaca
tcatgacctttacagaatttccctacctccagcagct
gaattctttcaatttggtagaagaatgaattccaagaacttatgaacaac
tttgttcaaaatggaaactgtaccgaagatagagctggagatcagaagaa
tgttcatttacttctcgtgtacaagttggtccacaggattaaagaacgta
gcaatatgatgactctctctgcctttttagacaaagcacaattttaccac
acaattgctcaagtgcatgttctatagtgtgcatcagactcctcaccaat
atcatatctgcagggctctgggtccatatgagagcttattttcaataaac
agtgaatgacttccattgtcctttatgattcgaaaccatgaatcaatgca
gattcctctagaaacttctctaaggaatagcaggcactttcaattagcct
ctaattaatttgctttattctataaattaaaaatgggagagttattttaa
ttcagaaacagaggcataaaaatatggaacaaagattcaaggaatatcca
catcataaatcagagtacatataaactcataaatacatactatgttcatt
cagataatggatgctttcttcccaacactccttggttgcccagaccactt
ctcagtccttaacaaattgcaaaagtcgcttgctttaaatcaaattcatg
ataaacatttgcaaggtctagcacatccaggtctccagttatttttcaaa
aatgagtcagtggaaaaatcaggtttccataaagcatgatttttacatag
gcctttggatgatgaaacttggtataatgagagagaaaaggcattttaaa
tcttcatggagctgtggaaacgaactcgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgcagtgtattacatgtactttaattcctattgcatacaagg
aaaagcccatatccacacccacctcaaacaatgttcaaggctctttaaca
aactgaggccagtctaccttttttaagacttattttcccatcatggcttg
aatgtttcacatctcccatgactggcacggcctttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_113938153_113939273
seq2: B6Ng01-192C22.b_45_1181

seq1  GAATTCCATAGTACTTCAGGCAGGCATATACAAGATAAACTCCAAAGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGTACTTCAGGCAGGCATATACAAGATAAACTCCAAAGCCG  50

seq1  CACGCCCTGTCTTACCTGGTAGAAGTAAGGGTTAGGCTCCGACTCTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCCTGTCTTACCTGGTAGAAGTAAGGGTTAGGCTCCGACTCTCCCA  100

seq1  CGCCCTGAAAGTCTTCCACGTTGATGAGCTGGAAGTCATACAGCAGGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTGAAAGTCTTCCACGTTGATGAGCTGGAAGTCATACAGCAGGCCC  150

seq1  GCGTTGGCTGTGCTGAACTCTGGCAGGAGCTGCACATGGGGCAAATTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGGCTGTGCTGAACTCTGGCAGGAGCTGCACATGGGGCAAATTCCC  200

seq1  TAGGTTTTTGTAGCGCCAGTTGTAGAGGTTACACAAGCTGCCCCAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTTGTAGCGCCAGTTGTAGAGGTTACACAAGCTGCCCCAAGACA  250

seq1  AAGACCCCGAACACAAAGATTAACAAGATGGGACCCTTCAGTATGCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCCGAACACAAAGATTAACAAGATGGGACCCTTCAGTATGCACAA  300

seq1  GGACATTCCAAGGAACCACACTGTTTCAGTTTTAGTGGCCAAACTTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCCAAGGAACCACACTGTTTCAGTTTTAGTGGCCAAACTTAGTC  350

seq1  ACTAAAAAAGATGATTAATACTTTGGGAACTTTAGGCTCCTTGCTCCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAAGATGATTAATACTTTGGGAACTTTAGGCTCCTTGCTCCAAG  400

seq1  TAATCAAGAGAGGGGATTGAAGATGTTCCAAAGCTGGTAGCTCTCCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGAGAGGGGATTGAAGATGTTCCAAAGCTGGTAGCTCTCCTGTG  450

seq1  CTCCCGTGTAAACTACTACTATGTCATCAACTACAGAGCCAGGAAGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGTGTAAACTACTACTATGTCATCAACTACAGAGCCAGGAAGGCCT  500

seq1  GTAAGCGCGGACACAGGAGGACCTGTGAAGTGGCTGGCTTTCCTTATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCGCGGACACAGGAGGACCTGTGAAGTGGCTGGCTTTCCTTATAAC  550

seq1  ATTAAGAATCAGTGTCTTCCCCTTGTTCACCTTTGCTTTAGGTTTTATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAATCAGTGTCTTCCCCTTGTTCACCTTTGCTTTAGGTTTTATCG  600

seq1  TTATGTTACTATGGTTGTGTCTTGGAGAGAGGATAAAGTGAATCCTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTACTATGGTTGTGTCTTGGAGAGAGGATAAAGTGAATCCTTTTC  650

seq1  AATCACTTAATATCAATTTAATGAAGAAAACAGTTTATTTGGTCAGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTAATATCAATTTAATGAAGAAAACAGTTTATTTGGTCAGTATA  700

seq1  CAGATTTGTAGAGAAAAGTTCCTAGGTTTGTAGAGGAGGCTAAAACTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTGTAGAGAAAAGTTCCTAGGTTTGTAGAGGAGGCTAAAACTTTT  750

seq1  TGTAACAGATCTTTCAGGGAACCTATGTTCTTGACTTGGAGTGACTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGATCTTTCAGGGAACCTATGTTCTTGACTTGGAGTGACTCCTC  800

seq1  ACCTTGCCCTGGCTCTCCCTTGAGCATCAAGGTCCACAGTAGGAACTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCCCTGGCTCTCCCTTGAGCATCAAGGTCCACAGTAGGAACTCCA  850

seq1  ACCCGGACGAAGCGAGTGAAAAGAGACTGCTCCATGTTGGAATAC-TTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCCGGACGAAGCGAGTGAAAAGAGACTGCTCCATGTTGGAATACTTTCT  900

seq1  GAAAGGCCATGTTCTTAATGACTGGAGGCAATTGGTGGTGATCGCCAATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCATGTTCTTAATGACTGGAGGCAATTGGTGGTGATCGCCAATC  950

seq1  ATAATCCACCGTTT-CAATCGGCTGAAT-CCGTCTTGAGGATTCTAGAAA  997
      |||||||||||||| || |||||||||| |||||||||||||||||||||
seq2  ATAATCCACCGTTTCCATTCGGCTGAATCCCGTCTTGAGGATTCTAGAAA  1000

seq1  CGACA-TGTG-AGGAAGCACCAAAGTAGTTCAATTAATACATTATGGA-C  1044
      ||||| |||| ||||  ||||||||||| ||| ||||||||||||||| |
seq2  CGACATTGTGAAGGAGCCACCAAAGTAG-TCATTTAATACATTATGGACC  1049

seq1  GGTTTC-TAG-CTCAC---CACACACAAGAACTG-TTCATCAGACG--AC  1086
      |||||| ||| |||||   ||| | ||||||||| |||||||||||  ||
seq2  GGTTTCTTAGCCTCACCCACACCCCCAAGAACTGTTTCATCAGACGGAAC  1099

seq1  ATCATGAAC-TTACAGA--TTCCCAACCTTCAGCAGCT  1121
      ||||||| | |||||||  ||||| |||| ||||||||
seq2  ATCATGACCTTTACAGAATTTCCCTACCTCCAGCAGCT  1137

seq1: chr2_114097254_114098285
seq2: B6Ng01-192C22.g_64_1101 (reverse)

seq1  GACAAAG--CGTG-CAGTCATGGGAGAATGTGAAACATACAAGCCATTGA  47
      |||||||  |||| |||||||||||| ||||||||||| ||||||| |||
seq2  GACAAAGGCCGTGCCAGTCATGGGAG-ATGTGAAACATTCAAGCCA-TGA  48

seq1  TGGGAAA--TAGTCTT-AAAAAGGTAGACTGGCCTCAGTTTG-TAAAGAG  93
      |||||||   |||||| ||||||||||||||||||||||||| |||||||
seq2  TGGGAAAATAAGTCTTAAAAAAGGTAGACTGGCCTCAGTTTGTTAAAGAG  98

seq1  CCTTGAACATTGTTTGA-GTGGGTGTGGATATGGGCTTTTCCTTGTATGC  142
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTTGAACATTGTTTGAGGTGGGTGTGGATATGGGCTTTTCCTTGTATGC  148

seq1  AATAAGGAATTAAAGTACATGT-ATACACTGCACACACACACACACACAC  191
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAT-AGGAATTAAAGTACATGTAATACACTGCACACACACACACACACAC  197

seq1  ACACACACACACACGAGTTCGTTTCCACAGCTCCATGAAGATTTAAAATG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACGAGTTCGTTTCCACAGCTCCATGAAGATTTAAAATG  247

seq1  CCTTTTCTCTCTCATTATACCAAGTTTCATCATCCAAAGGCCTATGTAAA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTCTCTCATTATACCAAGTTTCATCATCCAAAGGCCTATGTAAA  297

seq1  AATCATGCTTTATGGAAACCTGATTTTTCCACTGACTCATTTTTGAAAAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGCTTTATGGAAACCTGATTTTTCCACTGACTCATTTTTGAAAAA  347

seq1  TAACTGGAGACCTGGATGTGCTAGACCTTGCAAATGTTTATCATGAATTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGAGACCTGGATGTGCTAGACCTTGCAAATGTTTATCATGAATTT  397

seq1  GATTTAAAGCAAGCGACTTTTGCAATTTGTTAAGGACTGAGAAGTGGTCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAAGCAAGCGACTTTTGCAATTTGTTAAGGACTGAGAAGTGGTCT  447

seq1  GGGCAACCAAGGAGTGTTGGGAAGAAAGCATCCATTATCTGAATGAACAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACCAAGGAGTGTTGGGAAGAAAGCATCCATTATCTGAATGAACAT  497

seq1  AGTATGTATTTATGAGTTTATATGTACTCTGATTTATGATGTGGATATTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTATTTATGAGTTTATATGTACTCTGATTTATGATGTGGATATTC  547

seq1  CTTGAATCTTTGTTCCATATTTTTATGCCTCTGTTTCTGAATTAAAATAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATCTTTGTTCCATATTTTTATGCCTCTGTTTCTGAATTAAAATAA  597

seq1  CTCTCCCATTTTTAATTTATAGAATAAAGCAAATTAATTAGAGGCTAATT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCATTTTTAATTTATAGAATAAAGCAAATTAATTAGAGGCTAATT  647

seq1  GAAAGTGCCTGCTATTCCTTAGAGAAGTTTCTAGAGGAATCTGCATTGAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGCCTGCTATTCCTTAGAGAAGTTTCTAGAGGAATCTGCATTGAT  697

seq1  TCATGGTTTCGAATCATAAAGGACAATGGAAGTCATTCACTGTTTATTGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTTTCGAATCATAAAGGACAATGGAAGTCATTCACTGTTTATTGA  747

seq1  AAATAAGCTCTCATATGGACCCAGAGCCCTGCAGATATGATATTGGTGAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCTCTCATATGGACCCAGAGCCCTGCAGATATGATATTGGTGAG  797

seq1  GAGTCTGATGCACACTATAGAACATGCACTTGAGCAATTGTGTGGTAAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGATGCACACTATAGAACATGCACTTGAGCAATTGTGTGGTAAAA  847

seq1  TTGTGCTTTGTCTAAAAAGGCAGAGAGAGTCATCATATTGCTACGTTCTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTTGTCTAAAAAGGCAGAGAGAGTCATCATATTGCTACGTTCTT  897

seq1  TAATCCTGTGGACCAACTTGTACACGAGAAGTAAATGAACATTCTTCTGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTGTGGACCAACTTGTACACGAGAAGTAAATGAACATTCTTCTGA  947

seq1  TCTCCAGCTCTATCTTCGGTACAGTTTCCATTTTGAACAAAGTTGTTCAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCTCTATCTTCGGTACAGTTTCCATTTTGAACAAAGTTGTTCAT  997

seq1  AAGTTCTTGGAATTCATTCTTCTACCAAATTGAAAGAATTC  1032
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTGGAATTCATTCTTCTACCAAATTGAAAGAATTC  1038