BAC Information

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BAC

Clone NameB6Ng01-192J10
Chromosome2 (Build37)
Map Location 8,632,981 - 8,787,458
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC672230
Downstream geneLOC100040710, LOC100040548, LOC100040566, Gata3, LOC100040768
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192J10.bB6Ng01-192J10.g
ACCGA015792GA015793
length5501,175
definitionB6Ng01-192J10.b B6Ng01-192J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,632,981 - 8,633,536)(8,786,296 - 8,787,458)
sequence
tcaaatttcctgtctcatcaatggtttccctagatttttcttttctttct
tattttataggttgattgatgtgttgccattgctgttactgtttttggtg
ctggagatttaatccagggtctcggtcatggtaagcaaactccctacaat
tctatatagttgtgtatatttgtagaacatgggggacacaaggatatttt
ggaaaaaattataaactgtatattgagtatatttcactcagaggaaggaa
ggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagg
aagggtgatgtgggatggaggacatttatttcatgaagctttcaatgaga
atcccaggcaagaatcatggtttggaatgattctgtactgacttctaata
tgctttacacattaaggacaaaccatatttgaattcatgtgaattgtttt
atatgccactggtattttgtccttactcttgtttttccctgtttggattt
tgagacaggggttccagcaatctgctctggctttgaacctcccagaatac


gaattctcagttggacccagaagacatggggtagagctgatctcattcat
actgaaatcacagaggaagtgggggtgagataccctctgcctgcttaagg
aggatagccacattctaactgtgaaagtgcttgttattgtcacatctcca
caacctcaagatgtgtgtcatttagttaagtgagaagtgattcataattc
ttgggtacttacgaagagaaaaggattcttagaagttgaaattgaagtat
gaagcatggattgaagatgacttaatactctcactagaagcaaaatgcac
tgggaacaagaaaaaatgatgcctgcgataaggaggggctggccactcat
gactgaaaccagtaagtgcatgatttgactttcttttgtcttggtcatca
gaagactaccgctggaactagttttgattctttaagtaagagacttctcc
tatattttattaaaaataaattgatttaatgtatggttaaagtaagttgt
tttactcagaactcttacagagtatatattcttaccagcaaactggaact
aaatttttctgagatgcagagaaatcaatatgagaatatagcaacatcaa
tattaatatcaataacagaaaaaatactaagtatttattactatgtacca
ggcaattaatatagcctttatcataacctcacaaagtcgatttgtcatct
caatcacatttttttttttctgtcaaacaaactgtcctgtagggattttc
atgggatctcccttccatcaacttctccagctttgggaaaggatggtggg
cctaaatccagttacaattttatagttcttggttttacatttagcttctt
ttagcatgaaataatttccccttaaagatacatattttctcccagcatgt
cactgattatctcctttgtcttcttttaatcatgtctaagttatggaaac
aaaacaatttcatgtattccaaggtgagtttgaagaaaggtgaagaatat
ttggggcctagaagttctttgcctcttggggaaaagtggttcgtgctttc
cactttgtgatttcctcccagcggcagacaggtaaagagcagagtacatg
tcactctgaaagccaacatgacctccgccaaatatggccttcttccatca
ctggaacattcccataatacgcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8632981_8633536
seq2: B6Ng01-192J10.b_41_596

seq1  GAATTCTCAAATTTCCTGTCTCATCAATGGTTTCCCTAGATTTTTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATTTCCTGTCTCATCAATGGTTTCCCTAGATTTTTCTTTT  50

seq1  CTTTCTTATTTTATAGGTTGATTGATGTGTTGCCATTGCTGTTACTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTATTTTATAGGTTGATTGATGTGTTGCCATTGCTGTTACTGTTT  100

seq1  TTGGTGCTGGAGATTTAATCCAGGGTCTCGGTCATGGTAAGCAAACTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGCTGGAGATTTAATCCAGGGTCTCGGTCATGGTAAGCAAACTCCC  150

seq1  TACAATTCTATATAGTTGTGTATATTTGTAGAACATGGGGGACACAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCTATATAGTTGTGTATATTTGTAGAACATGGGGGACACAAGGA  200

seq1  TATTTTGGAAAAAATTATAAACTGTATATTGAGTATATTTCACTCAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGAAAAAATTATAAACTGTATATTGAGTATATTTCACTCAGAGG  250

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  300

seq1  GGAAGGAAGGGTGATGTGGGATGGAGGACATTTATTTCATGAAGCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGGTGATGTGGGATGGAGGACATTTATTTCATGAAGCTTTCA  350

seq1  ATGAGAATCCCAGGCAAGAATCATGGTTTGGAATGATTCTGTACTGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAATCCCAGGCAAGAATCATGGTTTGGAATGATTCTGTACTGACTT  400

seq1  CTAATATGCTTTACACATTAAGGACAAACCATATTTGAATTCATGTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATGCTTTACACATTAAGGACAAACCATATTTGAATTCATGTGAAT  450

seq1  TGTTTTATATGCCACTGGTATTTTGTCCTTACTCTTGTTTTTCCCTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATATGCCACTGGTATTTTGTCCTTACTCTTGTTTTTCCCTGTTT  500

seq1  GGATTTTGAGACAGGGGTTCCTGCAATCTGCTCTGGCTTTGAACCTCCCA  550
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGATTTTGAGACAGGGGTTCCAGCAATCTGCTCTGGCTTTGAACCTCCCA  550

seq1  GAATAC  556
      ||||||
seq2  GAATAC  556


seq1: chr2_8786296_8787458
seq2: B6Ng01-192J10.g_69_1243 (reverse)

seq1  AATGCGTATTTATGGAAATGTT-CAGTGAATGAAAAGAAG--CATTATTG  47
      |||||||| |||||| |||||| ||||||  |  ||||||  |||  |||
seq2  AATGCGTA-TTATGGGAATGTTCCAGTGATGG--AAGAAGGCCATATTTG  47

seq1  GC-GAAGTCATG-TGGCTTTCAGGAGTGAACATGTACTCTGCTCCTTACC  95
      || || |||||| ||||||||| ||||| ||||||||||||||| |||||
seq2  GCGGAGGTCATGTTGGCTTTCA-GAGTG-ACATGTACTCTGCTCTTTACC  95

seq1  TGTCTG-CGCTGGAAGGAATCCACAAAGTGGAAGCCACGAACCACTTT--  142
      |||||| |||||| |||||  ||||||||||||  |||||||||||||  
seq2  TGTCTGCCGCTGGGAGGAAATCACAAAGTGGAAAGCACGAACCACTTTTC  145

seq1  CACCAGAGGCAAAGA--CTCTA-GCCCCAAATATTCTTCA-CTTTC-TCA  187
      | | |||||||||||   |||| ||||||||||||||||| ||||| |||
seq2  CCCAAGAGGCAAAGAACTTCTAGGCCCCAAATATTCTTCACCTTTCTTCA  195

seq1  AACTCA-CTTTGAATACATGAAATTG-TTTGTTT-CATAACTTAGACATG  234
      |||||| ||| ||||||||||||||| ||||||| |||||||||||||||
seq2  AACTCACCTTGGAATACATGAAATTGTTTTGTTTCCATAACTTAGACATG  245

seq1  AATAAAAAGAAGACAAAGGAGATAATCAGTGACATGCTGGGAGAAAATAT  284
       || ||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATTAAAAGAAGACAAAGGAGATAATCAGTGACATGCTGGGAGAAAATAT  294

seq1  GTATCTTTAAGGGGAAATTATTTCATGCTAAAAGAAGCT-AATGTAAAAC  333
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTATCTTTAAGGGGAAATTATTTCATGCTAAAAGAAGCTAAATGTAAAAC  344

seq1  CAAGAACTATAAAATTGTAACTGGATTTAGGCCCACCATCCTTTCCCAAA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTATAAAATTGTAACTGGATTTAGGCCCACCATCCTTTCCCAAA  394

seq1  GCTGGAGAAGTTGATGGAAGGGAGATCCCATGAAAATCCCTACAGGACAG  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAAGTTGATGGAAGGGAGATCCCATGAAAATCCCTACAGGACAG  444

seq1  TTTGTTTGACAG-AAAAAAAAAATGTGATTGAGATGACAAATCGACTTTG  482
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGACAGAAAAAAAAAAATGTGATTGAGATGACAAATCGACTTTG  494

seq1  TGAGGTTATGATAAAGGCTATATTAATTGCCTGGTACATAGTAATAAATA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTATGATAAAGGCTATATTAATTGCCTGGTACATAGTAATAAATA  544

seq1  CTTAGTATTTTTTCTGTTATTGATATTAATATTGATGTTGCTATATTCTC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTATTTTTTCTGTTATTGATATTAATATTGATGTTGCTATATTCTC  594

seq1  ATATTGATTTCTCTGCATCTCAGAAAAATTTAGTTCCAGTTTGCTGGTAA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGATTTCTCTGCATCTCAGAAAAATTTAGTTCCAGTTTGCTGGTAA  644

seq1  GAATATATACTCTGTAAGAGTTCTGAGTAAAACAACTTACTTTAACCATA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATACTCTGTAAGAGTTCTGAGTAAAACAACTTACTTTAACCATA  694

seq1  CATTAAATCAATTTATTTTTAATAAAATATAGGAGAAGTCTCTTACTTAA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATCAATTTATTTTTAATAAAATATAGGAGAAGTCTCTTACTTAA  744

seq1  AGAATCAAAACTAGTTCCAGCGGTAGTCTTCTGATGACCAAGACAAAAGA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAAAACTAGTTCCAGCGGTAGTCTTCTGATGACCAAGACAAAAGA  794

seq1  AAGTCAAATCATGCACTTACTGGTTTCAGTCATGAGTGGCCAGCCCCTCC  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAATCATGCACTTACTGGTTTCAGTCATGAGTGGCCAGCCCCTCC  844

seq1  TTATCGCAGGCATCATTTTTTCTTGTTCCCAGTGCATTTTGCTTCTAGTG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGCAGGCATCATTTTTTCTTGTTCCCAGTGCATTTTGCTTCTAGTG  894

seq1  AGAGTATTAAGTCATCTTCAATCCATGCTTCATACTTCAATTTCAACTTC  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTAAGTCATCTTCAATCCATGCTTCATACTTCAATTTCAACTTC  944

seq1  TAAGAATCCTTTTCTCTTCGTAAGTACCCAAGAATTATGAATCACTTCTC  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATCCTTTTCTCTTCGTAAGTACCCAAGAATTATGAATCACTTCTC  994

seq1  ACTTAACTAAATGACACACATCTTGAGGTTGTGGAGATGTGACAATAACA  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTAAATGACACACATCTTGAGGTTGTGGAGATGTGACAATAACA  1044

seq1  AGCACTTTCACAGTTAGAATGTGGCTATCCTCCTTAAGCAGGCAGAGGGT  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTTCACAGTTAGAATGTGGCTATCCTCCTTAAGCAGGCAGAGGGT  1094

seq1  ATCTCACCCCCACTTCCTCTGTGATTTCAGTATGAATGAGATCAGCTCTA  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACCCCCACTTCCTCTGTGATTTCAGTATGAATGAGATCAGCTCTA  1144

seq1  CCCCATGTCTTCTGGGTCCAACTGAGAATTC  1163
      |||||||||||||||||||||||||||||||
seq2  CCCCATGTCTTCTGGGTCCAACTGAGAATTC  1175


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