BAC Information

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BAC

Clone NameB6Ng01-192L20
Chromosome2 (Build37)
Map Location 111,787,862 - 111,952,037
singlet/doubletdoublet
Overlap geneOlfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1
Upstream geneLOC668802, LOC623270, LOC623301, 4930430A15Rik, Olfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307
Downstream geneOlfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633, LOC100043187, Agpat7, Nut, Nola3, Slc12a6, Tmem85, EG668839, 2410042D21Rik, 2900064A13Rik, Chrm5, Aven, Ryr3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192L20.bB6Ng01-192L20.g
ACCGA015898GA015899
length1,1111,166
definitionB6Ng01-192L20.b B6Ng01-192L20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,950,928 - 111,952,037)(111,787,862 - 111,789,033)
sequence
gaattcatttgcatatgatggtgtaatttcctcaggttgcataagttgtg
gaaaactgagtattgcttaatcacatggtagctttaataaaatccttcct
tccctctttaccttcctttctgctccctcccttccctctctctctccctc
cctccctccctccctccctctgttccttcctccctctgttcctctttccc
tccctcctttcctctccattccgaaaacatggtcaatgcctaataagtgt
gtatgctatttcaaagctaccatatttcgaaattttacggatgcctcata
caatttttttgtaatggagtcttagtttatatgcatatcaacaacttaaa
gatagatctatttttttttttacatctactctgagctttggataaagagt
ctttaacaggtataaagcgatacttacttttattttaaagttcattcctc
aatattaagcagtgttcatttttcatatatctgtctttaatttggtttta
atgttagattttaaacaggatttcatatttcttcttgatatattctatta
atatcagctattggtatattatattaatataatttatattttcctgtttc
cttctccaggtagtactgacatacatgctaatggggggagcaaacctctc
tgtggtatcagagtttgtatttcttggactcaccaactcctgggacatcc
agcttcttctctttgtgttctcctctgtgttttatgtggcaagcatgatg
ggaaactcactcatcatttttactgtggcttcagaccctcacttacacac
tccaatgtactttctgttggctaacctctccttcattgacttaggtgttc
ttctgttacctcacccaagatgatttatgatctgtttagaaagcacaaag
tcatctccttttacaggttgtgttattcagatcttctccatccatgttat
ggtggtgttggagaatggttttactcatcgccatggcttttgatagatat
gtagccatatgtaaactctcattacttgaccatttggagcccagaatggt
gtctctcttgtagttattgccttggaatagttggccctataacacctctc
tggctcagctg
gaattcaatatcctctactttcaaactagaacgagttcagaggtgttcct
cataacatggaagattagccaacaacaaagacagcaattcatccaagttt
ttaaaatttcatttgaagagtaatgtattttcagttcaattacaaaaaaa
gcaaaaaataacaacaacaaacaaacaaacaaaaaaactactcactgttc
ttcaactatccatgttgatctccatggcaatgactatagacattattcag
gattgtagtatcttacttttgacttttcatctctgcaaaacatataaccc
caaggtttgtgaaatgatttttattatcatgaagttttactttaaaatat
aaacattaatatattatcctttaattgagttaactggacataatactaac
tccccaaaaaggtagatttatatgtatttgaattctgtcaagcagtccgt
tatcaatttgcatcatttcaagatttctttaacagttgacatcatgacaa
aaatcaagcatacaaacttgagtatcagtcttgaagtactaaacatgata
attattctacattaacctgaatctcctccaagttggcatcatgtagtagt
aactatatggttaaacctctgcaaagttatctcattattgaagggttttg
ttttatttaaaaaattataacaggacagtggacagaatagggttttcaat
tcaaaagccaagcttaataccatactttagctactgaaagttattaaaca
ggctaaatgattaaatatctgaggcttggtatcatttatttgtttgtttg
ttttaccattgtttctttactgaacaaactaaaacattgttttatgttta
actttaagactaaaacaaatatagaatcatatgctcaaaaaccaactatt
tccaaatgtggttttgcaatgaatgttatcattttactttctttaactgt
ctaataatgatgttaaacatatgagaataaattaaattttaaaaggtgaa
ttgttcagtaacagagaacgccaaaaacaaaggtcaagattgtattactg
ttatttaaagtattatttcacaattcatatttaatgtcttataaataatc
aaatttcatatacttgatgcaatttgtatcagaacagtatttaatttatg
caattattcaataacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111950928_111952037
seq2: B6Ng01-192L20.b_46_1156 (reverse)

seq1  CAGCTGAGCCAGAGA-GTG-TATAAGGCCAACTA-TCCAA-GCAATAACT  46
      ||||||||||||||| ||| |||| ||||||||| ||||| |||||||||
seq2  CAGCTGAGCCAGAGAGGTGTTATAGGGCCAACTATTCCAAGGCAATAACT  50

seq1  ACAAAGAAGAGACA-CATTCTTGGGCTCAAAATGGTCAGGTAATGGAGAG  95
      ||||   ||||||| ||||| ||||||| ||||||||| ||||| |||| 
seq2  ACAA--GAGAGACACCATTC-TGGGCTCCAAATGGTCAAGTAAT-GAGA-  95

seq1  GTTTACATATGGCTACATATCTATCAAAAGCCATGGCGATGAGTAAAACC  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACATATGGCTACATATCTATCAAAAGCCATGGCGATGAGTAAAACC  145

seq1  A-TCTCC-ACACCACCAATAACATGGATGGAGAAGATCTGAATAACACAA  193
      | ||||| |||||||| |||||||||||||||||||||||||||||||||
seq2  ATTCTCCAACACCACC-ATAACATGGATGGAGAAGATCTGAATAACACAA  194

seq1  CCTGT-AAAGGAGATGACTTTGTGCTTTCTAAACAGATCATAAATCATCT  242
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAAAGGAGATGACTTTGTGCTTTCTAAACAGATCATAAATCATCT  244

seq1  TGGGTGAGGTAACAGAAGAAACACCTAAGTCAATGAAGGAGAGGTTAGCC  292
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGGGTGAGGTAACAGAAG-AACACCTAAGTCAATGAAGGAGAGGTTAGCC  293

seq1  AACAGAAAGTACATTGGAGTGTGTAAGTGAGGGTCTGAAGCCACAGTAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGTACATTGGAGTGTGTAAGTGAGGGTCTGAAGCCACAGTAAA  343

seq1  AATGATGAGTGAGTTTCCCATCATGCTTGCCACATAAAACACAGAGGAGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGAGTGAGTTTCCCATCATGCTTGCCACATAAAACACAGAGGAGA  393

seq1  ACACAAAGAGAAGAAGCTGGATGTCCCAGGAGTTGGTGAGTCCAAGAAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGAGAAGAAGCTGGATGTCCCAGGAGTTGGTGAGTCCAAGAAAT  443

seq1  ACAAACTCTGATACCACAGAGAGGTTTGCTCCCCCCATTAGCATGTATGT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTCTGATACCACAGAGAGGTTTGCTCCCCCCATTAGCATGTATGT  493

seq1  CAGTACTACCTGGAGAAGGAAACAGGAAAATATAAATTATATTAATATAA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTACCTGGAGAAGGAAACAGGAAAATATAAATTATATTAATATAA  543

seq1  TATACCAATAGCTGATATTAATAGAATATATCAAGAAGAAATATGAAATC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAATAGCTGATATTAATAGAATATATCAAGAAGAAATATGAAATC  593

seq1  CTGTTTAAAATCTAACATTAAAACCAAATTAAAGACAGATATATGAAAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAAAATCTAACATTAAAACCAAATTAAAGACAGATATATGAAAAA  643

seq1  TGAACACTGCTTAATATTGAGGAATGAACTTTAAAATAAAAGTAAGTATC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACTGCTTAATATTGAGGAATGAACTTTAAAATAAAAGTAAGTATC  693

seq1  GCTTTATACCTGTTAAAGACTCTTTATCCAAAGCTCAGAGTAGATGTAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATACCTGTTAAAGACTCTTTATCCAAAGCTCAGAGTAGATGTAAA  743

seq1  AAAAAAAATAGATCTATCTTTAAGTTGTTGATATGCATATAAACTAAGAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATAGATCTATCTTTAAGTTGTTGATATGCATATAAACTAAGAC  793

seq1  TCCATTACAAAAAAATTGTATGAGGCATCCGTAAAATTTCGAAATATGGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTACAAAAAAATTGTATGAGGCATCCGTAAAATTTCGAAATATGGT  843

seq1  AGCTTTGAAATAGCATACACACTTATTAGGCATTGACCATGTTTTCGGAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAAATAGCATACACACTTATTAGGCATTGACCATGTTTTCGGAA  893

seq1  TGGAGAGGAAAGGAGGGAGGGAAAGAGGAACAGAGGGAGGAAGGAACAGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGAAAGGAGGGAGGGAAAGAGGAACAGAGGGAGGAAGGAACAGA  943

seq1  GGGAGGGAGGGAGGGAGGGAGGGAGAGAGAGAGGGAAGGGAGGGAGCAGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGAGGGAGGGAGGGAGAGAGAGAGGGAAGGGAGGGAGCAGA  993

seq1  AAGGAAGGTAAAGAGGGAAGGAAGGATTTTATTAAAGCTACCATGTGATT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGTAAAGAGGGAAGGAAGGATTTTATTAAAGCTACCATGTGATT  1043

seq1  AAGCAATACTCAGTTTTCCACAACTTATGCAACCTGAGGAAATTACACCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATACTCAGTTTTCCACAACTTATGCAACCTGAGGAAATTACACCA  1093

seq1  TCATATGCAAATGAATTC  1110
      ||||||||||||||||||
seq2  TCATATGCAAATGAATTC  1111

seq1: chr2_111787862_111789033
seq2: B6Ng01-192L20.g_66_1231

seq1  GAATTCAATATCCTCTACTTTCAAACTAGAACGAGTTCAGAGGTGTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATCCTCTACTTTCAAACTAGAACGAGTTCAGAGGTGTTCCT  50

seq1  CATAACATGGAAGATTAGCCAACAACAAAGACAGCAATTCATCCAAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACATGGAAGATTAGCCAACAACAAAGACAGCAATTCATCCAAGTTT  100

seq1  TTAAAATTTCATTTGAAGAGTAATGTATTTTCAGTTCAATTACAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTCATTTGAAGAGTAATGTATTTTCAGTTCAATTACAAAAAAA  150

seq1  GCAAAAAATAACAACAACAAACAAACAAACAAAAAAACTACTCACTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAATAACAACAACAAACAAACAAACAAAAAAACTACTCACTGTTC  200

seq1  TTCAACTATCCATGTTGATCTCCATGGCAATGACTATAGACATTATTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTATCCATGTTGATCTCCATGGCAATGACTATAGACATTATTCAG  250

seq1  GATTGTAGTATCTTACTTTTGACTTTTCATCTCTGCAAAACATATAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAGTATCTTACTTTTGACTTTTCATCTCTGCAAAACATATAACCC  300

seq1  CAAGGTTTGTGAAATGATTTTTATTATCATGAAGTTTTACTTTAAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTGTGAAATGATTTTTATTATCATGAAGTTTTACTTTAAAATAT  350

seq1  AAACATTAATATATTATCCTTTAATTGAGTTAACTGGACATAATACTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTAATATATTATCCTTTAATTGAGTTAACTGGACATAATACTAAC  400

seq1  TCCCCAAAAAGGTAGATTTATATGTATTTGAATTCTGTCAAGCAGTCCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAAAAGGTAGATTTATATGTATTTGAATTCTGTCAAGCAGTCCGT  450

seq1  TATCAATTTGCATCATTTCAAGATTTCTTTAACAGTTGACATCATGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATTTGCATCATTTCAAGATTTCTTTAACAGTTGACATCATGACAA  500

seq1  AAATCAAGCATACAAACTTGAGTATCAGTCTTGAAGTACTAAACATGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGCATACAAACTTGAGTATCAGTCTTGAAGTACTAAACATGATA  550

seq1  ATTATTCTACATTAACCTGAATCTCCTCCAAGTTGGCATCATGTAGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTACATTAACCTGAATCTCCTCCAAGTTGGCATCATGTAGTAGT  600

seq1  AACTATATGGTTAAACCTCTGCAAAGTTATCTCATTATTGAAGGGTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATGGTTAAACCTCTGCAAAGTTATCTCATTATTGAAGGGTTTTG  650

seq1  TTTTATTTAAAAAATTATAACAGGACAGTGGACAGAATAGGGTTTTCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAAAAAATTATAACAGGACAGTGGACAGAATAGGGTTTTCAAT  700

seq1  TCAAAAGCCAAGCTTAATACCATACTTTAGCTACTGAAAGTTATTAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCCAAGCTTAATACCATACTTTAGCTACTGAAAGTTATTAAACA  750

seq1  GGCTAAATGATTAAATATCTGAGGCTTGGTATCATTTATTTGTTTGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATGATTAAATATCTGAGGCTTGGTATCATTTATTTGTTTGTTTG  800

seq1  TTTTACCATTGTTTCTTTACTGAACAAACTAAAACATTGTTTTATGTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCATTGTTTCTTTACTGAACAAACTAAAACATTGTTTTATGTTTA  850

seq1  ACTTTAAGACTAAAACAAATATAGAATCATATGCTCAAAAACCAACTA-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTTTAAGACTAAAACAAATATAGAATCATATGCTCAAAAACCAACTATT  900

seq1  TCCAAATGTGGTTTTGCAATGAATGTTATCATTTTACTTTCTTTAACTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCAAATGTGGTTTTGCAATGAATGTTATCATTTTACTTTCTTTAAC-TG  949

seq1  TCT-ATAATGATGTTAAACATATGAG-ATAAATT-AATTTTAAAA-GTGA  995
      ||| |||||||||||||||||||||| ||||||| |||||||||| ||||
seq2  TCTAATAATGATGTTAAACATATGAGAATAAATTAAATTTTAAAAGGTGA  999

seq1  AT--GTCAGTTAACAGAGAACGCCAAAAACAAAGGTCCAAGA-TGTATTA  1042
      ||   |||| |||||||||||||||||||||||||| ||||| |||||| 
seq2  ATTGTTCAG-TAACAGAGAACGCCAAAAACAAAGGT-CAAGATTGTATT-  1046

seq1  ACTGTTATTTAAAAGTA-TATTTCAACATCCATATTTATTGTCTTATAAA  1091
      |||||||||| |||||| |||||||  || |||||||| |||||||||||
seq2  ACTGTTATTT-AAAGTATTATTTCACAATTCATATTTAATGTCTTATAAA  1095

seq1  TAAATCAAATTTCAAATATAAACTTGATGCATTTGTTATCAAAGAACAGT  1141
      | |||||||||||    ||| |||||||||| ||  ||||  ||||||||
seq2  T-AATCAAATTTC----ATATACTTGATGCAATTTGTATC--AGAACAGT  1138

seq1  TAATTTTAATTTATGCAATTATATCATAACC  1172
          ||||||||||||||||||   ||||||
seq2  ---ATTTAATTTATGCAATTATTCAATAACC  1166