BAC Information

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BAC

Clone NameB6Ng01-192M07
Chromosome2 (Build37)
Map Location 30,213,988 - 30,360,865
singlet/doubletdoublet
Overlap geneSh3glb2, 5730472N09Rik, Dolpp1, Crat, Ppp2r4, Ier5l
Upstream geneCrsp8, Rapgef1, LOC433415, OTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1, Odf2, Gle1l, Spna2, LOC665532, Wdr34, Set, Pkn3, Zdhhc12, Zer1, LOC100041114, Tbc1d13, Slc39a1-ps, Endog, D2Wsu81e, Ccbl1, 1700084E18Rik, Lrrc8a, Phyhd1, Dolk, Nup188
Downstream geneCstad, EG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192M07.bB6Ng01-192M07.g
ACCGA015920GA015921
length243449
definitionB6Ng01-192M07.b B6Ng01-192M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,360,623 - 30,360,865)(30,213,988 - 30,214,436)
sequence
ctccttgagaccctgaccctgatcatgtgttttccttttccatcccagaa
gactggccatgtgtgtgttcctgcctgcgccccccaccccgccatttttg
aagagttcccaacagttcagggtcatagagttccccagcccccatgggcc
ccactcatcaacagcttgcctggggtggggacaggggagagtcatctagt
cctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
cctcagtttctctttcttctaccaaatgtttaggacttgttccaatatca
gcattaccggcctggacagaacccaaagagcctgccagatcctagccttc
tgacatcctttaggcctgggaagtaaaaggaaacaagcctcccgcagagc
agaaaggaaataactcctggcttccggcctgactccccaagcgtgtgaaa
gggactggatgcaaccattagcaccaacctgcccattgcacgggtatgga
gactgaggctcgcaaaagagattggggtatttttgtgtggccctcaacct
gccagcctggcctggggcgggggaggggaggaaggcagactagtgcagag
aggcctgaaccacccagtgggcatccacctcccgggctgtgcaggcacca
gggcagtgggcaaacttgtcagtgtaaacgggcactgccaggcgcccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_30360623_30360865
seq2: B6Ng01-192M07.b_49_291 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACAGAGGACTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAGAGGACTAGAT  50

seq1  GACTCTCCCCTGTCCCCACCCCAGGCAAGCTGTTGATGAGTGGGGCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCCCCTGTCCCCACCCCAGGCAAGCTGTTGATGAGTGGGGCCCAT  100

seq1  GGGGGCTGGGGAACTCTATGACCCTGAACTGTTGGGAACTCTTCAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTGGGGAACTCTATGACCCTGAACTGTTGGGAACTCTTCAAAAAT  150

seq1  GGCGGGGTGGGGGGCGCAGGCAGGAACACACACATGGCCAGTCTTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGTGGGGGGCGCAGGCAGGAACACACACATGGCCAGTCTTCTGGG  200

seq1  ATGGAAAAGGAAAACACATGATCAGGGTCAGGGTCTCAAGGAG  243
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGGAAAACACATGATCAGGGTCAGGGTCTCAAGGAG  243

seq1: chr2_30213988_30214436
seq2: B6Ng01-192M07.g_77_525

seq1  CCTCAGTTTCTCTTTCTTCTACCAAATGTTTAGGACTTGTTCCAATATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTTTCTCTTTCTTCTACCAAATGTTTAGGACTTGTTCCAATATCA  50

seq1  GCATTACCGGCCTGGACAGAACCCAAAGAGCCTGCCAGATCCTAGCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACCGGCCTGGACAGAACCCAAAGAGCCTGCCAGATCCTAGCCTTC  100

seq1  TGACATCCTTTAGGCCTGGGAAGTAAAAGGAAACAAGCCTCCCGCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCCTTTAGGCCTGGGAAGTAAAAGGAAACAAGCCTCCCGCAGAGC  150

seq1  AGAAAGGAAATAACTCCTGGCTTCCGGCCTGACTCCCCAAGCGTGTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAAATAACTCCTGGCTTCCGGCCTGACTCCCCAAGCGTGTGAAA  200

seq1  GGGACTGGATGCAACCATTAGCACCAACCTGCCCATTGCACGGGTATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGATGCAACCATTAGCACCAACCTGCCCATTGCACGGGTATGGA  250

seq1  GACTGAGGCTCGCAAAAGAGATTGGGGTATTTTTGTGTGGCCCTCAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGCTCGCAAAAGAGATTGGGGTATTTTTGTGTGGCCCTCAACCT  300

seq1  GCCAGCCTGGCCTGGGGCGGGGGAGGGGAGGAAGGCAGACTAGTGCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGCCTGGGGCGGGGGAGGGGAGGAAGGCAGACTAGTGCAGAG  350

seq1  AGGCCTGAACCACCCAGTGGGCATCCACCTCCCGGGCTGTGCAGGCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGAACCACCCAGTGGGCATCCACCTCCCGGGCTGTGCAGGCACCA  400

seq1  GGGCAGTGGGCAAACTTGTCAGTGTAAACGGGCACTGCCAGGCGCCCAG  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGGGCAAACTTGTCAGTGTAAACGGGCACTGCCAGGCGCCCAG  449