BAC Information

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BAC

Clone NameB6Ng01-193I21
Chromosome2 (Build37)2 (Build37)
Map Location 176,189,134 - 176,190,292175,405,950 - 175,406,802
singlet/doubletsingletsinglet
Overlap geneLOC627914
Upstream geneLOC100043914, LOC100043915, LOC668009, LOC100038953, LOC620804, LOC100039000, LOC100043126, LOC100039017, LOC100039036, LOC100039049, LOC626832, OTTMUSG00000016203, LOC100039060, LOC668030
Downstream geneLOC100039093, LOC668039, LOC100039109, LOC100043381, LOC100043387, LOC100039123, LOC626877, LOC100039156, LOC100039166, 6230416C02Rik, LOC635470, LOC100043403, LOC100039198, LOC100043406, LOC668066
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193I21.bB6Ng01-193I21.g
ACCGA016494GA016495
length1,145812
definitionB6Ng01-193I21.b B6Ng01-193I21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(176,189,134 - 176,190,292)(175,405,950 - 175,406,802)
sequence
gaattcattactaactggttctagctaacctgcccaaattaaacacccac
gaatcagattttactaaactatatccataaattaatataatctgtgaagt
tatcaaattattctcactgccctaatcaggtccttctccataacagtgac
ccctgcagcatactcccctctggtctgtgacctagctcttgtcagcactg
ttttatctgacagtgtacacagtaagctgtttctctggttctcatcctgc
caagtgtatttccacacacaaacccctgccacaaaggttttgtccagatg
caggcttataataaagttactcagaggccacagcctggtccaaaaggaga
gactaagtccacaagggacctcacaggtggccccatctgtctggctgagg
cttaccatcctgcctctgggaagacctattacacaggcatcctttgctaa
gatgcttgctcaccccacttcgttggagatgaagttgcacttaccatgtc
tgaagttctaagcttgcctgagctaacctcacagcattcagtaaaaataa
taagaaccgattccacagaaaatctgagagcagctgagttacacagagaa
acttgcaggcttagtaactggaagagtcacctcctcttctgcctggcaac
tccatgtggaggttttgattggccattgagtcttgagtgacatgaggacc
atgcttagggtcagagtgtctgtagggacacagcacaatggttcgagcct
gggccaatccttttccatatctgcagatttccagttcagtagcactagtg
tgtctcctccaatggcctacctgtctgatcccctgccaagcccttctgag
gggctaagattcttgatccctgctgcttacctgcctgcctctccaccttt
ctggtcagtgactctgggttcactgctttggaaaggttggagcttgcctg
agctccaatcaagcgctcaaggaggcatttcccttcttcctcctgcatca
agctgggtagcttgcataccccatcaatcagctgacactgagtttaccaa
ctgtcccacaggtggtcagtgccagattatagcactggagagggatttag
acatataagatttcgtttttgtcgctcaggctggcctcaagtact
gaattcagagagataatcagctgtgagtaaaaacagagaaactttttgga
gtcaaactcaaggctaagatgaatagtaactattacaaaactggaattgc
cttgcagttagtaatacaattaaaatccgcaattcataaaacctaccatg
ccgggcttgatggtgcatgcttttagtcccaggacacgggaggcagagga
aggcagatttcccagttgaaggccagcctggtctaccgagtgagtccagg
atagccagggctacagagaaaccctgtcttgcaaaaaaacaaacaaacaa
ataaataaataaacaaataaataaataaaacatcccatgaacagaggaac
actgtaaacaatttatactatgtaaatcttaagattatagaggaaaaact
agtcaaaatgacaatttgtccattaacttgggacattagagacaacatcc
atagttaatatagaattactcatattttatttttaggattaatttggaac
aggaaataaaaaatagcccttaagttgcccttaacaaataaaattgtgat
tgtttatctgtgtttgttgttatttctcagacacagccttatttagaata
tcagagtcactaattaaacgctaataaaaaacaattaaatcaaaattaat
ttatctctgttctttgatttatctgctcattggaggccagcagcctgtat
tgtcttcctctctttgccttactctgagcagcctatttgaagagcagtga
ctccctgcacctctaagtctaaacgcattggaatagatcagaactctggg
aagaaattcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_176189134_176190292
seq2: B6Ng01-193I21.b_45_1189

seq1  GAATTCATTACTAACTGGTTCTAGCTAACCTGCCCAAATTAAACACCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTAACTGGTTCTAGCTAACCTGCCCAAATTAAACACCCAC  50

seq1  GAATCAGATTTTACTAAACTATATCCATAAATTAATATAATCTGTGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGATTTTACTAAACTATATCCATAAATTAATATAATCTGTGAAGT  100

seq1  TATCAAATTATTCTCACTGCCCTAATCAGGTCCTTCTCCATAACAGTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATTATTCTCACTGCCCTAATCAGGTCCTTCTCCATAACAGTGAC  150

seq1  CCCTGCAGCATACTCCCCTCTGGTCTGTGACCTAGCTCTTGTCAGCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGCATACTCCCCTCTGGTCTGTGACCTAGCTCTTGTCAGCACTG  200

seq1  TTTTATCTGACAGTGTACACAGTAAGCTGTTTCTCTGGTTCTCATCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTGACAGTGTACACAGTAAGCTGTTTCTCTGGTTCTCATCCTGC  250

seq1  CAAGTGTATTTCCACACACAAGCCCCTGCCACAAAGGTTTTGTCCAGATG  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAAGTGTATTTCCACACACAAACCCCTGCCACAAAGGTTTTGTCCAGATG  300

seq1  CAGGCTTATAATAAAGTTACTCAGAGGCCACAGCCTGGTCCAAAAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTATAATAAAGTTACTCAGAGGCCACAGCCTGGTCCAAAAGGAGA  350

seq1  GACTAAGTCCACAAGGGACCTCACAGGTGGCCCCATCTGTCTGGCTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGTCCACAAGGGACCTCACAGGTGGCCCCATCTGTCTGGCTGAGG  400

seq1  CTTACCATCCTGCCTCTGGGAAGACCTATTATACAGGCATCCTTTGCTAA  450
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTACCATCCTGCCTCTGGGAAGACCTATTACACAGGCATCCTTTGCTAA  450

seq1  GATGTTTGCTCACCCCACTTCGTTGGAGATGAAGTTGCACTTACCATGTC  500
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTGCTCACCCCACTTCGTTGGAGATGAAGTTGCACTTACCATGTC  500

seq1  TGAAGTTCTAAGCTTGCCTGAGCTAACCTCACAGCATTCAGTAAAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCTAAGCTTGCCTGAGCTAACCTCACAGCATTCAGTAAAAATAA  550

seq1  TAAGAACCGATTCCACAGAAAATCTGAGAGCAGCTGAGTTACACAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACCGATTCCACAGAAAATCTGAGAGCAGCTGAGTTACACAGAGAA  600

seq1  ACTTGCAGGCTTAGTACCTGGAAGAGTCACCTCCTCTTCTGCCTGGCAAC  650
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTTGCAGGCTTAGTAACTGGAAGAGTCACCTCCTCTTCTGCCTGGCAAC  650

seq1  TCCATGTGGAGGTTTTGATTGGTCATTGAGTCTTGAGTGACATGAGGACC  700
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCCATGTGGAGGTTTTGATTGGCCATTGAGTCTTGAGTGACATGAGGACC  700

seq1  ATGCTTAGGGTCAGAGTGTCTGTAGGGACACAGCACAATGGTTCGAGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGGGTCAGAGTGTCTGTAGGGACACAGCACAATGGTTCGAGCCT  750

seq1  GGGCCAATCCTTTTCCATATCTGCAGATTTCCAGTTCAGTAGCACTAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAATCCTTTTCCATATCTGCAGATTTCCAGTTCAGTAGCACTAGTG  800

seq1  TGTCTCCTCCAATGGCCTACCTGTCTGATCCCCTGCCAAGCCCTTCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTCCAATGGCCTACCTGTCTGATCCCCTGCCAAGCCCTTCTGAG  850

seq1  GGGCTAAGATTCTTGATCCCTGCTGCTTACCTGCCTGCCTCTCCACCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAGATTCTTGATCCCTGCTGCTTACCTGCCTGCCTCTCCACCTTT  900

seq1  CTGGTCAGTGACCCTGGGTTCACTGCTTT-GAAAGGTTGGAGCTTGCCTG  949
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  CTGGTCAGTGACTCTGGGTTCACTGCTTTGGAAAGGTTGGAGCTTGCCTG  950

seq1  AGCTCCAAATCCAGCGCTC-AGGAGGCATTTCCCCTTCTTCCTCCTGGAA  998
      |||||| |||| ||||||| ||||||||||| |||||||||||||| | |
seq2  AGCTCC-AATCAAGCGCTCAAGGAGGCATTT-CCCTTCTTCCTCCT-GCA  997

seq1  TCAAGCTGGGTAGCTTGCATACCCCATCAATCAGCTGACACTGGAGTTAC  1048
      |||||||||||||||||||||||||||||||||||||||||| |||||  
seq2  TCAAGCTGGGTAGCTTGCATACCCCATCAATCAGCTGACACT-GAGTTTA  1046

seq1  CAAACTGT-CCACAGGTGGTCAGTGCCAGAATATTAGCAACTGAAGAGGG  1097
      | |||||| ||||||||||||||||||||| || |||| |||| ||||||
seq2  CCAACTGTCCCACAGGTGGTCAGTGCCAGATTA-TAGC-ACTGGAGAGGG  1094

seq1  ATTTTAGGATATAAGATTTTG-TTTTGTGGCTTCAGGCTGGGTTCAGGTA  1146
      ||||    ||||||||||| | |||||| || |||||||||  |      
seq2  ATTTAGACATATAAGATTTCGTTTTTGTCGC-TCAGGCTGGCCT------  1137

seq1  AATTGCAAGTACT  1159
           ||||||||
seq2  -----CAAGTACT  1145

seq1: chr2_175405950_175406802
seq2: B6Ng01-193I21.g_64_875

seq1  GAATTCAGAGAGATAATCAGCTGTGAGTAAAAACAGAGAAACTTTTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGATAATCAGCTGTGAGTAAAAACAGAGAAACTTTTTGGA  50

seq1  GTCAAACTCAAGGCTAAGATGAATAGTAACTATTACAAAACTGGAATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACTCAAGGCTAAGATGAATAGTAACTATTACAAAACTGGAATTGC  100

seq1  CTTGCAGTTAGTAATACAATTAAAATCCGCAATTCATAAAACCTACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGTTAGTAATACAATTAAAATCCGCAATTCATAAAACCTACCATG  150

seq1  CCGGGCTTGATGGTGCATGCTTTTAGTCCCAGGACACGGGAGGCAGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCTTGATGGTGCATGCTTTTAGTCCCAGGACACGGGAGGCAGAGGA  200

seq1  AGGCAGATTTCCCAGTTGAAGGCCAGCCTGGTCTACCGAGTGAGTCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATTTCCCAGTTGAAGGCCAGCCTGGTCTACCGAGTGAGTCCAGG  250

seq1  ATAGCCAGGGCTACAGAGAAACCCTGTCTTGCAAAAAAACAAACAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGGGCTACAGAGAAACCCTGTCTTGCAAAAAAACAAACAAACAA  300

seq1  ATAAATAAATAAACAAATAAATAAATAAAACATCCCATGAACAGAGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAACAAATAAATAAATAAAACATCCCATGAACAGAGGAAC  350

seq1  ACTGTAAACAATTTATACTATGTAAATCTTAAGATTATAGAGGAAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAACAATTTATACTATGTAAATCTTAAGATTATAGAGGAAAAACT  400

seq1  AGTCAAAATGACAATTTGTCCATTAACTTGGGACATTAGAGACAACATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATGACAATTTGTCCATTAACTTGGGACATTAGAGACAACATCC  450

seq1  ATAGTTAATATAGAATTACTCATATTTTATTTTTAGGATTAATTTGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAATATAGAATTACTCATATTTTATTTTTAGGATTAATTTGGAAC  500

seq1  AGGAAATAAAAAATAGCCCTTAAGTTGCCCTTAACAAATAAAATTGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAAAAAATAGCCCTTAAGTTGCCCTTAACAAATAAAATTGTGAT  550

seq1  TGTTTATCTGTG-TTGTTGTTATTTCTCAGACACAGCCTTATTTAGAATA  599
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCTGTGTTTGTTGTTATTTCTCAGACACAGCCTTATTTAGAATA  600

seq1  TCAGAGTCACTAAATAAACGCTAAT-AAAAACAATTAAATCAAAATTAAT  648
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TCAGAGTCACTAATTAAACGCTAATAAAAAACAATTAAATCAAAATTAAT  650

seq1  TTATCTCTGTTCTTTGA-TTATCTGCTCATTGGAGGCCAGCAGCCTGTAT  697
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTATCTCTGTTCTTTGATTTATCTGCTCATTGGAGGCCAGCAGCCTGTAT  700

seq1  TGTCTTCCTCTCTTTGCCTTACTCTGAGCAGCCTATTTGAAGAGCAGTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTCTCTTTGCCTTACTCTGAGCAGCCTATTTGAAGAGCAGTGA  750

seq1  CTCCCAGCACCTCTAAGTCTAAACTCTTTGG-ATAGTCCAGAACTCTGGG  796
      ||||| |||||||||||||||||| | |||| ||||  ||||||||||||
seq2  CTCCCTGCACCTCTAAGTCTAAACGCATTGGAATAGATCAGAACTCTGGG  800

seq1  AAGAAA-TCTCCACATGGCTTAGGCAAAATCTGTACCTTGCTAAAAAGCC  845
      |||||| || ||                                      
seq2  AAGAAATTCCCC--------------------------------------  812

seq1  ACCTCCCC  853
              
seq2  --------  812