BAC Information

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BAC

Clone NameB6Ng01-193N02
Chromosome2 (Build37)
Map Location 153,727,784 - 153,728,513
singlet/doubletsinglet
Overlap geneBpil3
Upstream geneMylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik, Commd7, 7530422B04Rik, Dnmt3b, LOC668932, Mapre1, EG329541, LOC100043869, Spag4l, Bpil1
Downstream geneRya3, LOC100043870, Gm1006, EG545477, Psp, LOC100043652, 1700058C13Rik, Plunc, 2310021H06Rik, U46068, BC018465, 5430413K10Rik, OTTMUSG00000015915, Cdk5rap1, Snta1, Cbfa2t2, Apba2bp, 1700003F12Rik, E2f1, Pxmp4, Zfp341, Chmp4b, LOC668936, LOC435692, Raly, Eif2s2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193N02.bB6Ng01-193N02.g
ACCGA016682GA016683
length1,080734
definitionB6Ng01-193N02.b B6Ng01-193N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattggcacatggggaaatttcctgaacaaaataccaatggcaga
ggttctaagataagcaattgacaaatagaaccttatgaaactgaaaaggt
tctgtaaggcaaaggaccctgtcaataggacaaaacagcaacctacagat
tgggaaaaaattcgatatatacaaaaaattcaagaagttagactcaagaa
aaaaaaaaacccaagtaatccaattttaaaatgcagtgaggagctaaaca
gagaattctcaaaagatgaatcttgaatgtccaagaagcacttaaagaaa
tgctcaacatccttagtcaggagggaaatgcaaatcaaaacaaccctgag
attccacctcacaccagtcagagaggctaagatgaaaaactcaggtgaca
gcagatgttgtcgaggatgtggagaaagaggaacactcctctattactgg
tggaaatgaaaactggtacaaactctgtaaatcaatctgacaattcctca
gaaaattgtaaatagttctgccctaagatccagctataccactcctaggc
atagacccaaagatgttctatcatagcacaaggacacatgctctactatg
ttcatagcagccttatttgtaatagctagaagctgggaaacaatccagat
gtccctcaacggaagaatggatacagaaaatgtggttcatttacacaata
gaatactattcaactcttaaaatgagggcatcatgaattttgtatgcaaa
tgtgccccaacctaacaggttaaacatgaggtcttcgagggaaggagtgg
agaatggatggaacaagagaactcaaggaaagaagacaaacagagaacct
tttaattttttaatttcgaaactttcaggtttataaagcctacaacccac
aatttcaagtggaattcaatggctagtacattgacaagtaattggaaaat
gctagcaaccatgtgagataaaagaaggttcagaccaaaggtcttaggag
gtcttacaccaagtccaggctgcaagttccactgcgaatctatcatacct
gggacagaacatcctgagcagagttaatat
gaattcctggagaacagtgagggaccaagataggaggccatttctcagct
tgctgttctctggtatgagaccttttgtgtctctcagtttctctattggc
aagactatgtctcaggggacctccagttctcccggaaccaccagtaaagt
gtgtggtatcagctctgggttgggaatggaagtcttctggaagggctgtg
tgcccacccgtgggatgggtgagattggaggacacttttcagagttcctt
tgtccttgctagaaggggacctccagttcctcaggggctgagttgggttt
tgggttgcagaggtagtgaggttgggctggagtaagcaagagacctggtg
accatgtgcacactgcagggtgaatcccttgatacagatgggttggggtt
tccctgtgggtccacactgtgggcccttgaactcctgtgggcatggagct
gcacttgaacacatacaaatctgcagctgatctgcccactgccttatgtg
gcaggctggccattgctctatgcccataggaaaagggaatttagggagaa
aaccctccctgaagtaactctgggcctttcacataggtggaggcatgctg
tgtagcctgagcctggtcctctgcggcctgctggctggcactcgagctga
cccttgggggtcttctgaggttgggcatggacattatgaaccatggtgag
tgaatgggccctgggcctgggtccaggggacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_153727784_153728513
seq2: B6Ng01-193N02.g_66_798

seq1  GAATTCCTGGAGAACAGTGAGGGACCAAGATAGGAGGCCATTTCTCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAGAACAGTGAGGGACCAAGATAGGAGGCCATTTCTCAGCT  50

seq1  TGCTGTTCTCTGGTATGAGACCTTTTGTGTCTCTCAGTTTCTCTATTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTCTGGTATGAGACCTTTTGTGTCTCTCAGTTTCTCTATTGGC  100

seq1  AAGACTATGTCTCAGGGGACCTCCAGTTCTCCCGGAACCACCAGTAAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATGTCTCAGGGGACCTCCAGTTCTCCCGGAACCACCAGTAAAGT  150

seq1  GTGTGGTATCAGCTCTGGGTTGGGAATGGAAGTCTTCTGGAAGGGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTATCAGCTCTGGGTTGGGAATGGAAGTCTTCTGGAAGGGCTGTG  200

seq1  TGCCCACCCGTGGGATGGGTGAGATTGGAGGACACTTTTCAGAGTTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCCGTGGGATGGGTGAGATTGGAGGACACTTTTCAGAGTTCCTT  250

seq1  TGTCCTTGCTAGAAGGGGACCTCCAGTTCCTCAGGGGCTGAGTTGGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGCTAGAAGGGGACCTCCAGTTCCTCAGGGGCTGAGTTGGGTTT  300

seq1  TGGGTTGCAGAGGTAGTGAGGTTGGGCTGGAGTAAGCAAGAGACCTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGCAGAGGTAGTGAGGTTGGGCTGGAGTAAGCAAGAGACCTGGTG  350

seq1  ACCATGTGCACACTGCAGGGTGAATCCCTTGATACAGATGGGTTGGGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGCACACTGCAGGGTGAATCCCTTGATACAGATGGGTTGGGGTT  400

seq1  TCCCTGTGGGTCCACACTGTGGGCCCTTGAACTCCTGTGGGCATGGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGGGTCCACACTGTGGGCCCTTGAACTCCTGTGGGCATGGAGCT  450

seq1  GCACTTGAACACATACAAATCTGCAGCTGATCTGCCCACTGCC-TATGTG  499
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCACTTGAACACATACAAATCTGCAGCTGATCTGCCCACTGCCTTATGTG  500

seq1  GCAGGCTGGCCATTGCTCTATGCCCATAGGAAAAGGGAATTTAGGGAGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGGCCATTGCTCTATGCCCATAGGAAAAGGGAATTTAGGGAGAA  550

seq1  AACCCTCCCTGAAGTAACTCTGGGCCTTTCACATAGGTGGAGGCATGCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCCCTGAAGTAACTCTGGGCCTTTCACATAGGTGGAGGCATGCTG  600

seq1  TGTAGCCTGAGCCTGGTCCTCTGCGGCCTGCTGGCTGGCACTCGAGCTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTGAGCCTGGTCCTCTGCGGCCTGCTGGCTGGCACTCGAGCTGA  650

seq1  CCC-TGGGGGTCTTCTGAGGTTGGGCATGGACATTATGAACCATGGTGAG  698
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGGGGTCTTCTGAGGTTGGGCATGGACATTATGAACCATGGTGAG  700

seq1  TGAATGGGCCCTGGG-CTGGGGCCAGGGGACAT  730
      ||||||||||||||| ||||| |||||||||||
seq2  TGAATGGGCCCTGGGCCTGGGTCCAGGGGACAT  733