BAC Information

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BAC

Clone NameB6Ng01-194A07
Chromosome2 (Build37)
Map Location 157,115,489 - 157,274,636
singlet/doubletdoublet
Overlap geneRpn2, Ghrh, LOC100043678, Manbal, Src
Upstream genePhf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik
Downstream geneBlcap, Nnat, Ctnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194A07.bB6Ng01-194A07.g
ACCGA016825GA016826
length1,158298
definitionB6Ng01-194A07.b B6Ng01-194A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,273,471 - 157,274,636)(157,115,489 - 157,115,786)
sequence
gaattcaaggccatcctgaactacaaaaagaccctgcctaaagaaaaaaa
gtctgcctagcttgataaacaaatttaaaccagaaaaaaaaattgcaact
catatgataaacaagggtttttaatatataaagagctcacgtaagataaa
aataaaaaaaaaaacaaaaccacagacagttcaccggaaaagcaaactga
gggagccttactcactacaaaactcctcagacaaaaggcaaatggaagca
gagcagccacccaggaacaccagacccacatgctcctcaagtgtgcacag
tgcgcacgaacactgtctaagtcagaccatatgctatgccagaaaacagg
gctcaatgcctttagaaatcaaatcacacaaagtgtgattccagccatga
cggagcagaaccaatcaacagcaacaacaaaaaaagcagctcaggttact
cgggtaggaattagaggagccggctgtggtaaggatgcctgaaatccctg
gactctggtggctgaggctggaggacccggaaggcagcctgagctacata
gtgagaatctattacaagagtacggagtcttgggtttaaggttcaccccc
cagaagaccacctgtggggttcaaatctctccttctaccatgtgggtccc
ggggactgaactcaggtcatcaagcttggcagcaagcacccttatcctct
gagccagcttgtttggtcctaaatcagtaaatttttctgtgtgtgtatgt
ctgtgcctggaaaacaaaaaaacagtctccgatcacctggagccagagtt
acaggtcatgtgactcccaacatgggtactgtaaatcaaattcagttcct
caggaggagctgcaagtattactaaccactgattcatctctgcaggccct
gaattagtcatcttaaaacttcccttaaaagggcccaggcccagatagct
tcactagtgaattctcttgacatgagccaaacacctgggaggcttcagtg
tgattgggccagacacttaggagggtgaagccctagttctcctatcagaa
caagctcgaatcactccatgagccagtgttcctgaactgcaaagaacatc
tagaaaatgaccactgacgttctcaaattccgaaagttaaacctgtccac
agacaaca
catctgcataattttagtcctataagaaagtctatttccctttaagtgtt
cactgtaatagtttttagatcactttttcttacagttcttctctctctta
tggaaggctttgaggttgtctttcccttctttaacctttaaaaacattcc
gtgcatcctcacctcagattctcgatcattcagtcgatgtagattacttt
aagtggacaagcagcgtgttgttatcctttgggagatttctgttgctgtg
atgaaacggcatgacccaaagcaccttggagtgggagggggttgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157273471_157274636
seq2: B6Ng01-194A07.b_52_1209 (reverse)

seq1  TGTTGTCTGTGGACAGTTTTTAACCTCTGGATTCTGAG-ACGTCAGTTGG  49
      ||||||||||||||||  |||||| |  ||| | |||| ||||||| |||
seq2  TGTTGTCTGTGGACAG-GTTTAACTTTCGGAATTTGAGAACGTCAG-TGG  48

seq1  TCATTTTCTTAGGATGTCTTTTTGCAGTTCCAGGGACACTGGCTTCATGG  99
      |||||||||   ||||| | ||||||||| |||| |||||||| ||||||
seq2  TCATTTTCT--AGATGT-TCTTTGCAGTT-CAGGAACACTGGC-TCATGG  93

seq1  AGTGAATCGGAGCTGTGTCCTGATA-GAGAACT-GGGCTTCACCCTCCCT  147
      ||||| || ||||| ||| |||||| ||||||| |||||||||||| |||
seq2  AGTGATTC-GAGCT-TGTTCTGATAGGAGAACTAGGGCTTCACCCT-CCT  140

seq1  AAGTGTCTGGCCCAATCCACCACTGAAGCCTCCCAGGTGTTTGGCTCATG  197
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  AAGTGTCTGGCCCAATC--ACACTGAAGCCTCCCAGGTGTTTGGCTCATG  188

seq1  TCAAGAGAATTCACTAGTGAAGCTATCTGGGCCTGGGCCCTTTTAAGGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGAATTCACTAGTGAAGCTATCTGGGCCTGGGCCCTTTTAAGGGA  238

seq1  AGTTTTAAGATGACTAATTCAGGGCCTGCAGAGATGAATCAGTGGTTAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAGATGACTAATTCAGGGCCTGCAGAGATGAATCAGTGGTTAGT  288

seq1  AATACTTGCAGCTCCTCCTGAGGAACTGAATTTGATTTACAGTACCCATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGCAGCTCCTCCTGAGGAACTGAATTTGATTTACAGTACCCATG  338

seq1  TTGGGAGTCACATGACCTGTAACTCTGGCTCCAGGTGATCGGAGACTGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTCACATGACCTGTAACTCTGGCTCCAGGTGATCGGAGACTGTT  388

seq1  TTTTTGTTTTCCAGGCACAGACATACACACACAGAAAAATTTACTGATTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTCCAGGCACAGACATACACACACAGAAAAATTTACTGATTT  438

seq1  AGGACC-AACAAGCTGGCTCAGAGGATAAGGGTGCTTGCTGCCAAGCTTG  496
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAACAAGCTGGCTCAGAGGATAAGGGTGCTTGCTGCCAAGCTTG  488

seq1  ATGACCTGAGTTCAGTCCCCGGGACCCACATGGTAGAAGGAGAGATTTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTGAGTTCAGTCCCCGGGACCCACATGGTAGAAGGAGAGATTTGA  538

seq1  ACCCCACAGGTGGTCTTCTGGGGGGTGAACCTTAAACCCAAGACTCCGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACAGGTGGTCTTCTGGGGGGTGAACCTTAAACCCAAGACTCCGTA  588

seq1  CTCTTGTAATAGATTCTCACTATGTAGCTCAGGCTGCCTTCCGGGTCCTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTAATAGATTCTCACTATGTAGCTCAGGCTGCCTTCCGGGTCCTC  638

seq1  CAGCCTCAGCCACCAGAGTCCAGGGATTTCAGGCATCCTTACCACAGCCG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCAGCCACCAGAGTCCAGGGATTTCAGGCATCCTTACCACAGCCG  688

seq1  GCTCCTCTAATTCCTACCCGAGTAACCTGAGCTGCTTTTTTTGTTGTTGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCTAATTCCTACCCGAGTAACCTGAGCTGCTTTTTTTGTTGTTGC  738

seq1  TGTTGATTGGTTCTGCTCCGTCATGGCTGGAATCACACTTTGTGTGATTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTGGTTCTGCTCCGTCATGGCTGGAATCACACTTTGTGTGATTT  788

seq1  GATTTCTAAAGGCATTGAGCCCTGTTTTCTGGCATAGCATATGGTCTGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTAAAGGCATTGAGCCCTGTTTTCTGGCATAGCATATGGTCTGAC  838

seq1  TTAGACAGTGTTCGTGCGCACTGTGCACACTTGAGGAGCATGTGGGTCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAGTGTTCGTGCGCACTGTGCACACTTGAGGAGCATGTGGGTCTG  888

seq1  GTGTTCCTGGGTGGCTGCTCTGCTTCCATTTGCCTTTTGTCTGAGGAGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTGGGTGGCTGCTCTGCTTCCATTTGCCTTTTGTCTGAGGAGTT  938

seq1  TTGTAGTGAGTAAGGCTCCCTCAGTTTGCTTTTCCGGTGAACTGTCTGTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTGAGTAAGGCTCCCTCAGTTTGCTTTTCCGGTGAACTGTCTGTG  988

seq1  GTTTTGTTTTTTTTTTTATTTTTATCTTACGTGAGCTCTTTATATATTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTTTTTTTATTTTTATCTTACGTGAGCTCTTTATATATTAA  1038

seq1  AAACCCTTGTTTATCATATGAGTTGCAATTTTTTTTTCTGGTTTAAATTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTGTTTATCATATGAGTTGCAATTTTTTTTTCTGGTTTAAATTT  1088

seq1  GTTTATCAAGCTAGGCAGACTTTTTTTCTTTAGGCAGGGTCTTTTTGTAG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCAAGCTAGGCAGACTTTTTTTCTTTAGGCAGGGTCTTTTTGTAG  1138

seq1  TTCAGGATGGCCTTGAATTC  1166
      ||||||||||||||||||||
seq2  TTCAGGATGGCCTTGAATTC  1158

seq1: chr2_157115489_157115786
seq2: B6Ng01-194A07.g_71_368

seq1  CATCTGCATAATTTTAGTCCTATAAGAAAGTCTATTTCCCTTTAAGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCATAATTTTAGTCCTATAAGAAAGTCTATTTCCCTTTAAGTGTT  50

seq1  CACTGTAATAGTTTTTAGATCACTTTTTCTTACAGTTCTTCTCTCTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAATAGTTTTTAGATCACTTTTTCTTACAGTTCTTCTCTCTCTTA  100

seq1  TGGAAGGCTTTGAGGTTGTCTTTCCCTTCTTTAACCTTTAAAAACATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGCTTTGAGGTTGTCTTTCCCTTCTTTAACCTTTAAAAACATTCC  150

seq1  GTGCATCCTCACCTCAGATTCTCGATCATTCAGTCGATGTAGATTACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCCTCACCTCAGATTCTCGATCATTCAGTCGATGTAGATTACTTT  200

seq1  AAGTGGACAAGCAGCGTGTTGTTATCCTTTGGGAGATTTCTGTTGCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGACAAGCAGCGTGTTGTTATCCTTTGGGAGATTTCTGTTGCTGTG  250

seq1  ATGAAACGGCATGACCCAAAGCACCTTGGAGTGGGAGGGGGTTGGGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACGGCATGACCCAAAGCACCTTGGAGTGGGAGGGGGTTGGGGA  298